BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140849.7 + phase: 0 /pseudo/partial
(191 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SYT_ARATH (O04630) Threonyl-tRNA synthetase, mitochondrial precu... 195 5e-50
SYT_HUMAN (P26639) Threonyl-tRNA synthetase, cytoplasmic (EC 6.1... 124 1e-28
SYTC_SCHPO (P87144) Threonyl-tRNA synthetase, cytoplasmic (EC 6.... 109 3e-24
SYT_CAEEL (P52709) Threonyl-tRNA synthetase, cytoplasmic (EC 6.1... 109 4e-24
SYT_THEMA (Q9WZJ9) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 99 8e-21
SYTC_YEAST (P04801) Threonyl-tRNA synthetase, cytoplasmic (EC 6.... 92 7e-19
SYT_FUSNN (Q8RFS6) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 83 3e-16
SYT_THETN (Q8R9A4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 82 8e-16
SYT_STRPY (Q9A115) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 71 2e-12
SYT_STRP8 (Q8P234) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 71 2e-12
SYT_STRP3 (Q8K8C0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 70 2e-12
SYT_WIGBR (Q8D3C0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 67 3e-11
SYT_STAAW (Q8NW68) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 67 3e-11
SYT_STAAN (P67585) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 67 3e-11
SYT_STAAM (P67584) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 67 3e-11
SYTM_SCHPO (O13969) Probable threonyl-tRNA synthetase, mitochond... 60 2e-09
SYT_HELPY (P56071) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 60 4e-09
SYT_DEIRA (Q9RSP3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 60 4e-09
SYT_HELPJ (Q9ZMV3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 59 7e-09
SYT_HALN1 (Q9HP27) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 59 9e-09
>SYT_ARATH (O04630) Threonyl-tRNA synthetase, mitochondrial
precursor (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS)
Length = 709
Score = 195 bits (496), Expect = 5e-50
Identities = 112/207 (54%), Positives = 129/207 (62%), Gaps = 21/207 (10%)
Query: 5 KHGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQ 61
++GC+LCIGPCTT GFYYD Y LGL D F IE+GA K E QP IEVT+DQ
Sbjct: 160 EYGCQLCIGPCTTRGEGFYYDGFYGELGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQ 219
Query: 62 ALEIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRAC----LEFPGFFSILEGGQ--- 114
ALE+FS++ FKVE+IN L D TITVYRCGPLVDL R F F L
Sbjct: 220 ALEMFSENNFKVELINGLPADMTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYW 279
Query: 115 K*KKFTECLWHIVS*S----KEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFF 163
K K E L + S K+ K EAKKYDHR+LG KQEL H+ SPGS+FF
Sbjct: 280 KGDKDRESLQRVYGISYPDQKQLKKYLQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFF 339
Query: 164 LPHGALIYNKLMDFIRNQYRHRGYQEV 190
LP G +YN+LMDFI+NQY HRGY EV
Sbjct: 340 LPLGTRVYNRLMDFIKNQYWHRGYTEV 366
>SYT_HUMAN (P26639) Threonyl-tRNA synthetase, cytoplasmic (EC
6.1.1.3) (Threonine--tRNA ligase) (ThrRS)
Length = 711
Score = 124 bits (311), Expect = 1e-28
Identities = 85/205 (41%), Positives = 109/205 (52%), Gaps = 24/205 (11%)
Query: 7 GCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQAL 63
GC LC GP ENGFYYD G+ F +E+ K++ EKQ +EV ++ L
Sbjct: 159 GC-LCYGP--PIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLL 215
Query: 64 EIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRAC-LEFPGFFSILEGGQK*KKF--- 119
+F +KFK I+N T TVYRCGPL+DL R + G L+ + +
Sbjct: 216 AMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEG 275
Query: 120 ---TECLWHIVS*S-------KEFK----EAKKYDHRILGLKQELVSLHEWSPGSWFFLP 165
E L I S KE++ EAK DHR +G QEL HE SPGS FFLP
Sbjct: 276 KADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLP 335
Query: 166 HGALIYNKLMDFIRNQYRHRGYQEV 190
GA IYN L++FIR++YR RG+QEV
Sbjct: 336 KGAYIYNALIEFIRSEYRKRGFQEV 360
>SYTC_SCHPO (P87144) Threonyl-tRNA synthetase, cytoplasmic (EC
6.1.1.3) (Threonine--tRNA ligase) (ThrRS)
Length = 703
Score = 109 bits (273), Expect = 3e-24
Identities = 80/210 (38%), Positives = 109/210 (51%), Gaps = 33/210 (15%)
Query: 8 CKLCIGPCTTTENGFYYD-AIYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQAL 63
C LCIGP T+ GF+Y+ I + + + IES A + + +KQP E ++++ L
Sbjct: 137 CHLCIGP--PTDEGFFYEMGIDNGRVITNDDYSSIESYAKQAIKQKQPFERLVISKEGLL 194
Query: 64 EIFSDDKFKVEIINNLAPD-ETITVYRCGPLVDL-----------YRACLEFPGFFSILE 111
E+F +K+K II PD + TVYRCGPL+DL ++ S
Sbjct: 195 EMFRYNKYKQYIIQTKIPDGASTTVYRCGPLIDLCTGPHVPHTGRIKSFAVTKNSSSYFL 254
Query: 112 GGQK*KKFTECLWHIVS*S-------KEFK----EAKKYDHRILGLKQELVSLHEWSPGS 160
G K + L + S +E+K EA K DHR +G QEL +E SPGS
Sbjct: 255 GDAK----NDSLQRVYGISFPDNKQMQEYKTFLAEAAKRDHRKIGRDQELFFFNEISPGS 310
Query: 161 WFFLPHGALIYNKLMDFIRNQYRHRGYQEV 190
FFLPHGA IYN L+ ++R QY RGYQEV
Sbjct: 311 CFFLPHGARIYNTLLKYMRYQYSKRGYQEV 340
>SYT_CAEEL (P52709) Threonyl-tRNA synthetase, cytoplasmic (EC
6.1.1.3) (Threonine--tRNA ligase) (ThrRS)
Length = 725
Score = 109 bits (272), Expect = 4e-24
Identities = 78/205 (38%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 7 GCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQAL 63
G LC GP + GFYYD + N + F I+ V +KQ +E+T++ L
Sbjct: 169 GGHLCYGP--PIQEGFYYDMWHENRTICPDDFPKIDQIVKAAVKDKQKFERLEMTKEDLL 226
Query: 64 EIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYR-----------ACLEFPGFFSILEG 112
E+F ++FKV II TVYRCGPL+DL R A S EG
Sbjct: 227 EMFKYNEFKVRIITEKIHTPKTTVYRCGPLIDLCRGPHVRHTGKVKAMAITKNSSSYWEG 286
Query: 113 GQK*KKFTECLWHIVS*SKEFKE-------AKKYDHRILGLKQELVSLHEWSPGSWFFLP 165
+ SK+ KE A K DHR LG + +L H+ SPGS F+ P
Sbjct: 287 KADAESLQRLYGISFPDSKQLKEWQKLQEEAAKRDHRKLGKEHDLFFFHQLSPGSAFWYP 346
Query: 166 HGALIYNKLMDFIRNQYRHRGYQEV 190
GA IYNKL+DFIR QYR RG+ EV
Sbjct: 347 KGAHIYNKLVDFIRKQYRRRGFTEV 371
>SYT_THEMA (Q9WZJ9) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 640
Score = 98.6 bits (244), Expect = 8e-21
Identities = 74/208 (35%), Positives = 107/208 (50%), Gaps = 25/208 (12%)
Query: 5 KHGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPI---EVTRDQ 61
K KL IGP T ENGFYYD N L + IE K++ E PI E+++++
Sbjct: 87 KENVKLGIGP--TIENGFYYDFDIKNGRLTEEDLPKIEQEMKKIIKENLPIERKEISKEE 144
Query: 62 ALEIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRA-CLEFPGF---FSIL------- 110
A E+F D +K+E+I + + +T+YR G VDL R L G F +L
Sbjct: 145 ARELFRDQPYKLELIEEIEGNR-VTIYRQGEFVDLCRGPHLPSTGIVKHFKLLSVSGAYW 203
Query: 111 EGGQK*KKFTECLWHIVS*SKE-------FKEAKKYDHRILGLKQELVSLH-EWSPGSWF 162
G +K T + ++ +EA++ DHR LG + EL L+ E++PG F
Sbjct: 204 RGSEKNPMLTRVYGTAFAKKEDLDNYLKFLEEAQRRDHRKLGPQLELFMLNTEYAPGMPF 263
Query: 163 FLPHGALIYNKLMDFIRNQYRHRGYQEV 190
FLP G ++ N+LM F R +R RGYQE+
Sbjct: 264 FLPKGVVVLNELMKFSRELHRERGYQEI 291
>SYTC_YEAST (P04801) Threonyl-tRNA synthetase, cytoplasmic (EC
6.1.1.3) (Threonine--tRNA ligase) (ThrRS)
Length = 734
Score = 92.0 bits (227), Expect = 7e-19
Identities = 71/220 (32%), Positives = 107/220 (48%), Gaps = 42/220 (19%)
Query: 7 GCKLCIGPCTTTENGFYYDAIYCNLGLKDYQ-----------FKIIESGAFKVVVEKQPI 55
G +C+GP T++GF+Y+ + +KD F +E A V+ +KQ
Sbjct: 166 GAHICLGP--PTDDGFFYEMAVRD-SMKDISESPERTVSQADFPGLEGVAKNVIKQKQKF 222
Query: 56 E---VTRDQALEIFSDDKFKVEIINNLAPDE-TITVYRCGPLVDLYRACL--EFPGF--- 106
E ++++ L++F K+K ++ PD TVYRCG L+DL C+ P
Sbjct: 223 ERLVMSKEDLLKMFHYSKYKTYLVQTKVPDGGATTVYRCGKLIDL---CVGPHIPHTGRI 279
Query: 107 --FSILEG------GQK*KKFTECLWHIVS*SKEFK--------EAKKYDHRILGLKQEL 150
F +L+ G + ++ I K+ EA DHR +G +QEL
Sbjct: 280 KAFKLLKNSSCYFLGDATNDSLQRVYGISFPDKKLMDAHLKFLAEASMRDHRKIGKEQEL 339
Query: 151 VSLHEWSPGSWFFLPHGALIYNKLMDFIRNQYRHRGYQEV 190
+E SPGS F+LPHG IYN L+D +R +YR RGY+EV
Sbjct: 340 FLFNEMSPGSCFWLPHGTRIYNTLVDLLRTEYRKRGYEEV 379
>SYT_FUSNN (Q8RFS6) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 620
Score = 83.2 bits (204), Expect = 3e-16
Identities = 64/207 (30%), Positives = 99/207 (46%), Gaps = 27/207 (13%)
Query: 9 KLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQALEI 65
K+ IGP ENGFYYD ++ + IE+ ++V E +E + RD+A+E
Sbjct: 72 KVTIGP--VIENGFYYDFDPVEQFTEE-DLEKIEAEMKRIVKENIKLEKYVLPRDEAIEY 128
Query: 66 FSD---DKFKVEIINNLAPDETITVYRCGPLVDLYRAC-LEFPGFFSILE---------- 111
F D +K+KVE++ + E ++ Y+ G DL R + G+ +
Sbjct: 129 FRDVDKNKYKVEVVEGIPQGEQVSFYKQGDFTDLCRGTHVPSTGYLKAFKLRTVAGAYWR 188
Query: 112 GGQK*KKFTECLWHIVS*SKEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFFL 164
G K K + S + K EA+K DHR LG + EL L E+ PG FFL
Sbjct: 189 GNSKNKMLQRIYGYSFSNEERLKHHLKLMEEAEKRDHRKLGKELELFFLSEYGPGFPFFL 248
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEVK 191
P G ++ N L+D R ++ GYQ+++
Sbjct: 249 PKGMIVRNVLIDLWRREHEKAGYQQLE 275
>SYT_THETN (Q8R9A4) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 644
Score = 82.0 bits (201), Expect = 8e-16
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 9 KLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQALEI 65
KL IGP +NGFYYD F+ IE K++ E +E +++++A++
Sbjct: 100 KLAIGPAI--DNGFYYD-FDTERPFTTEDFEAIEEEMNKIIKEDYKLERFVLSKEEAIKF 156
Query: 66 FS--DDKFKVEIINNLAPDETITVYRCGPLVDLYRAC-LEFPGFFSILE---------GG 113
D+ +KVE+I + E I+ Y+ G VDL L G ++ G
Sbjct: 157 MKEKDEPYKVELIEEIPEGEEISFYKQGEFVDLCAGPHLPSTGMVKAIKLLSVAGAYWKG 216
Query: 114 QK*KKFTECLWHIVS*SKEF--------KEAKKYDHRILGLKQELVSLHEWSPGSWFFLP 165
+ K + ++ I K +EAKK DHR LG + +L S+H PG FF P
Sbjct: 217 DEKNKMLQRIYGISFPKKSMLDEYLHMMEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHP 276
Query: 166 HGALIYNKLMDFIRNQYRHRGYQEVK 191
G +I N L DF R ++ RGYQE++
Sbjct: 277 KGMIIRNILEDFWRKEHIKRGYQEIR 302
>SYT_STRPY (Q9A115) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 647
Score = 70.9 bits (172), Expect = 2e-12
Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 10 LCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPI---EVTRDQALEIF 66
L +GP GFYYD + + IE+ K+V E P EVT+++ALE+F
Sbjct: 92 LGVGPAIA--EGFYYDTDNAEGQISNEDLPRIEAEMQKIVTENYPCIREEVTKEEALELF 149
Query: 67 SDDKFKVEIINNLAPDETITVYRCGPLVDLYRA-------------CLEFPG-FFSILEG 112
DD +KVE+IN A +TVYR G VDL R L G ++
Sbjct: 150 KDDPYKVELINEHA-GAGLTVYRQGEFVDLCRGPHVPSTGRIQVFHLLNVAGAYWRGNSD 208
Query: 113 GQK*KKFTECLWHIVS*SKEF----KEAKKYDHRILGLKQELVSL-HEWSPGSWFFLPHG 167
++ W K + +EAK+ DHR LG + +L + E G F+LP G
Sbjct: 209 NNMMQRIYGTAWFDKKDLKAYLTRLEEAKERDHRKLGKELDLFMISQEVGQGLPFWLPDG 268
Query: 168 ALIYNKLMDFIRNQYRHRGYQEV 190
A I L +I ++ GYQ V
Sbjct: 269 ATIRRTLERYITDKELASGYQHV 291
>SYT_STRP8 (Q8P234) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 647
Score = 70.9 bits (172), Expect = 2e-12
Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 10 LCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPI---EVTRDQALEIF 66
L +GP GFYYD + + IE+ K+V E P EVT+++ALE+F
Sbjct: 92 LGVGPAIA--EGFYYDTDNAEGQISNEDLPRIEAEMQKIVTENYPCIREEVTKEEALELF 149
Query: 67 SDDKFKVEIINNLAPDETITVYRCGPLVDLYRA-------------CLEFPG-FFSILEG 112
DD +KVE+IN A +TVYR G VDL R L G ++
Sbjct: 150 KDDPYKVELINEHA-GAGLTVYRQGEFVDLCRGPHVPSTGRIQVFHLLNVAGAYWRGNSD 208
Query: 113 GQK*KKFTECLWHIVS*SKEF----KEAKKYDHRILGLKQELVSL-HEWSPGSWFFLPHG 167
++ W K + +EAK+ DHR LG + +L + E G F+LP G
Sbjct: 209 NNMMQRIYGTAWFDKKDLKAYLTRLEEAKERDHRKLGKELDLFMISQEVGQGLPFWLPDG 268
Query: 168 ALIYNKLMDFIRNQYRHRGYQEV 190
A I L +I ++ GYQ V
Sbjct: 269 ATIRRTLERYITDKELASGYQHV 291
>SYT_STRP3 (Q8K8C0) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 647
Score = 70.5 bits (171), Expect = 2e-12
Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 10 LCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPI---EVTRDQALEIF 66
L +GP GFYYD + + IE+ K+V E P EVT+++ALE+F
Sbjct: 92 LGVGPAIA--EGFYYDTDNTEGQISNEDLPRIEAEMQKIVTENYPCIREEVTKEEALELF 149
Query: 67 SDDKFKVEIINNLAPDETITVYRCGPLVDLYRA-------------CLEFPG-FFSILEG 112
DD +KVE+IN A +TVYR G VDL R L G ++
Sbjct: 150 KDDPYKVELINEHA-GAGLTVYRQGEFVDLCRGPHVPSTGRIQVFHLLNVAGAYWRGNSD 208
Query: 113 GQK*KKFTECLWHIVS*SKEF----KEAKKYDHRILGLKQELVSL-HEWSPGSWFFLPHG 167
++ W K + +EAK+ DHR LG + +L + E G F+LP G
Sbjct: 209 NNMMQRIYGTAWFDKKDLKAYLTRLEEAKERDHRKLGKELDLFMISQEVGQGLPFWLPDG 268
Query: 168 ALIYNKLMDFIRNQYRHRGYQEV 190
A I L +I ++ GYQ V
Sbjct: 269 ATIRRTLERYITDKELASGYQHV 291
>SYT_WIGBR (Q8D3C0) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 636
Score = 67.0 bits (162), Expect = 3e-11
Identities = 63/198 (31%), Positives = 98/198 (48%), Gaps = 25/198 (12%)
Query: 18 TENGFYYDAIYCNLGLKDYQFKIIESGA---FKVVVEKQPIEVTRDQALEIFSD--DKFK 72
TENGFYYD I N L K+IE K+ + I VT +A E+F + + +K
Sbjct: 97 TENGFYYD-IDLNHKLSKNDLKLIEKKMHQLLKINFKINKINVTWGKAYEMFKNLNEIYK 155
Query: 73 VEII-NNLAPDETITVYRCGPLVDL----YRACLEFPGFFSILE------GGQK*KKFTE 121
++I+ +N++ + ++ +Y VDL + ++F FF I + G K K +
Sbjct: 156 IKILEDNISKNSSLYIYHQEQYVDLCTLPHVPNIKFCMFFKIQKISGAYWKGNKKNKMLQ 215
Query: 122 CL----WHIVS*SKEF----KEAKKYDHRILGLKQELVSLHEWSPGSWFFLPHGALIYNK 173
+ W S K F KE + DHR +G K +L ++E SPG F+ +G +I+
Sbjct: 216 RIYVTSWDSNSKLKNFIKNIKELEHRDHRKIGKKLDLFHIYENSPGMVFWHHNGWIIFRI 275
Query: 174 LMDFIRNQYRHRGYQEVK 191
L FIR + + YQEVK
Sbjct: 276 LEKFIRKKLKKFYYQEVK 293
>SYT_STAAW (Q8NW68) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 645
Score = 66.6 bits (161), Expect = 3e-11
Identities = 62/206 (30%), Positives = 97/206 (46%), Gaps = 29/206 (14%)
Query: 9 KLCIGPCTTTENGFYYDA-IYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQALE 64
K +GP E GFYYD I N+ D F+ IE ++V E IE V+RD+A E
Sbjct: 93 KFGVGP--VIEGGFYYDFDIDQNISSDD--FEQIEKTMKQIVNENMKIERKVVSRDEAKE 148
Query: 65 IFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRACLEFPGFFSILE-----------GG 113
+FS+D++K+E+I+ + DE +T+Y G DL R + P I E G
Sbjct: 149 LFSNDEYKLELIDAIPEDENVTLYSQGDFTDLCRG-VHVPSTAKIKEFKLLSTAGAYWRG 207
Query: 114 QK*KKFTECLWHIVS*SKE--------FKEAKKYDHRILGLKQELVSLHEW-SPGSWFFL 164
K + ++ K+ +E K+ DHR +G + EL + + G +L
Sbjct: 208 DSNNKMLQRIYGTAFFDKKELKAHLQMLEERKERDHRKIGKELELFTNSQLVGAGLPLWL 267
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEV 190
P+GA I ++ +I ++ GY V
Sbjct: 268 PNGATIRREIERYIVDKEVSMGYDHV 293
>SYT_STAAN (P67585) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 645
Score = 66.6 bits (161), Expect = 3e-11
Identities = 62/206 (30%), Positives = 97/206 (46%), Gaps = 29/206 (14%)
Query: 9 KLCIGPCTTTENGFYYDA-IYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQALE 64
K +GP E GFYYD I N+ D F+ IE ++V E IE V+RD+A E
Sbjct: 93 KFGVGP--VIEGGFYYDFDIDQNISSDD--FEQIEKTMKQIVNENMKIERKVVSRDEAKE 148
Query: 65 IFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRACLEFPGFFSILE-----------GG 113
+FS+D++K+E+I+ + DE +T+Y G DL R + P I E G
Sbjct: 149 LFSNDEYKLELIDAIPEDENVTLYSQGDFTDLCRG-VHVPSTAKIKEFKLLSTAGAYWRG 207
Query: 114 QK*KKFTECLWHIVS*SKE--------FKEAKKYDHRILGLKQELVSLHEW-SPGSWFFL 164
K + ++ K+ +E K+ DHR +G + EL + + G +L
Sbjct: 208 DSNNKMLQRIYGTAFFDKKELKAHLQMLEERKERDHRKIGKELELFTNSQLVGAGLPLWL 267
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEV 190
P+GA I ++ +I ++ GY V
Sbjct: 268 PNGATIRREIERYIVDKEVSMGYDHV 293
>SYT_STAAM (P67584) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 645
Score = 66.6 bits (161), Expect = 3e-11
Identities = 62/206 (30%), Positives = 97/206 (46%), Gaps = 29/206 (14%)
Query: 9 KLCIGPCTTTENGFYYDA-IYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQALE 64
K +GP E GFYYD I N+ D F+ IE ++V E IE V+RD+A E
Sbjct: 93 KFGVGP--VIEGGFYYDFDIDQNISSDD--FEQIEKTMKQIVNENMKIERKVVSRDEAKE 148
Query: 65 IFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRACLEFPGFFSILE-----------GG 113
+FS+D++K+E+I+ + DE +T+Y G DL R + P I E G
Sbjct: 149 LFSNDEYKLELIDAIPEDENVTLYSQGDFTDLCRG-VHVPSTAKIKEFKLLSTAGAYWRG 207
Query: 114 QK*KKFTECLWHIVS*SKE--------FKEAKKYDHRILGLKQELVSLHEW-SPGSWFFL 164
K + ++ K+ +E K+ DHR +G + EL + + G +L
Sbjct: 208 DSNNKMLQRIYGTAFFDKKELKAHLQMLEERKERDHRKIGKELELFTNSQLVGAGLPLWL 267
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEV 190
P+GA I ++ +I ++ GY V
Sbjct: 268 PNGATIRREIERYIVDKEVSMGYDHV 293
>SYTM_SCHPO (O13969) Probable threonyl-tRNA synthetase,
mitochondrial precursor (EC 6.1.1.3) (Threonine--tRNA
ligase) (ThrRS)
Length = 473
Score = 60.5 bits (145), Expect = 2e-09
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 135 EAKKYDHRILGLKQELVSLHEWSPGSWFFLPHGALIYNKLMDFIRNQYRHRGYQEV 190
E+ DHR + +Q+L + +PGS FFLPHG IYN+L+DF+R QY+ G++E+
Sbjct: 42 ESTLNDHRTIAARQKLYTTSILTPGSIFFLPHGTRIYNRLVDFLRAQYQIHGFEEI 97
>SYT_HELPY (P56071) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 612
Score = 59.7 bits (143), Expect = 4e-09
Identities = 59/206 (28%), Positives = 91/206 (43%), Gaps = 28/206 (13%)
Query: 9 KLCIGPCTTTENGFYYD----AIYCNLGLKDYQFKIIESGAFKVVVEKQPIEVTRDQALE 64
K +GP E GFYYD + L + K+ E K+ + K+ + TR+QALE
Sbjct: 70 KFFVGP--VVEEGFYYDFKTSSKISEEDLPKIEAKMKEFAKLKLAITKETL--TREQALE 125
Query: 65 IFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRA----CLEFPGFFSILE------GGQ 114
F D+ K +++ + D VY+ G DL + F F + + GG
Sbjct: 126 RFKGDELKHAVMSKIGGD-AFGVYQQGEFEDLCKGPHLPNTRFLNHFKLTKLAGAYLGGD 184
Query: 115 K*KKFTECLWHIVS*SKE--------FKEAKKYDHRILGLKQELVSL-HEWSPGSWFFLP 165
+ + ++ I +KE +EAKK DHR LG++ L S E G +LP
Sbjct: 185 ENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLP 244
Query: 166 HGALIYNKLMDFIRNQYRHRGYQEVK 191
GA + ++ D + RGY+ VK
Sbjct: 245 KGARLRKRIEDLLSQALLLRGYEPVK 270
>SYT_DEIRA (Q9RSP3) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 649
Score = 59.7 bits (143), Expect = 4e-09
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 56 EVTRDQALEIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYR-----ACLEFPGFFSIL 110
E+++D+AL F D +K E+I L DE IT Y G DL R + + P F ++
Sbjct: 145 EISKDEALAQFPHDPYKAELIEGLPDDEPITFYSQGDYTDLCRGPHFPSTGKLPQSFKLM 204
Query: 111 -------EGGQK*KKFTECLWHIVS*SKE-------FKEAKKYDHRILGLKQELVSLHEW 156
G +K + KE +EAK+ DHR LG + EL ++
Sbjct: 205 STSGAYWRGNEKNPILQRIYGVAFATQKELDEYLFQLEEAKRRDHRKLGKELELFTIDPL 264
Query: 157 -SPGSWFFLPHGALIYNKLMDFIRNQYRHRGYQEV 190
G +LP+G ++ +L +F++ Q RGYQ V
Sbjct: 265 VGKGLPLWLPNGTVLREELTNFMKEQQFQRGYQGV 299
>SYT_HELPJ (Q9ZMV3) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 612
Score = 58.9 bits (141), Expect = 7e-09
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 9 KLCIGPCTTTENGFYYD----AIYCNLGLKDYQFKIIESGAFKVVVEKQPIEVTRDQALE 64
K +GP E GFYYD + L + K+ E K+ + K+ + TR+QALE
Sbjct: 70 KFFVGP--VVEEGFYYDFKTTSKISEEDLPKIEAKMKEFAKSKLAITKETL--TREQALE 125
Query: 65 IFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRA----CLEFPGFFSILE------GGQ 114
F D+ K +++ ++ D VY+ G DL + F F + + GG
Sbjct: 126 RFKGDELKHAVMSKISGD-IFGVYQQGEFEDLCKGPHLPNTRFLNHFKLTKLAGAYLGGD 184
Query: 115 K*KKFTECLWHIVS*SKE--------FKEAKKYDHRILGLKQELVSL-HEWSPGSWFFLP 165
+ + ++ I +KE +EAKK DHR LG++ L S E G +LP
Sbjct: 185 ENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLP 244
Query: 166 HGALIYNKLMDFIRNQYRHRGYQEVK 191
GA + ++ D + RGY+ VK
Sbjct: 245 KGARLRKRIEDLLSQALLLRGYEPVK 270
>SYT_HALN1 (Q9HP27) Threonyl-tRNA synthetase (EC 6.1.1.3)
(Threonine--tRNA ligase) (ThrRS)
Length = 650
Score = 58.5 bits (140), Expect = 9e-09
Identities = 58/206 (28%), Positives = 97/206 (46%), Gaps = 27/206 (13%)
Query: 9 KLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVV---VEKQPIEVTRDQALEI 65
KL IGP T + GFYYD L D I++ A ++ ++ + +E R A E
Sbjct: 103 KLTIGPYT--DEGFYYDIANVELDADDLDE--IQAEAASIIDDDLDVERVEYDRADAREH 158
Query: 66 FSDDKFKVEIIN-NLAPDETITVYRCGPLVDLYRA----CLEFPGFFSILE-------GG 113
++D++FK EI++ A D ++ Y G DL + G F +LE G
Sbjct: 159 YADNEFKREILDAEAAGDGPVSFYTQGDFEDLCKGPHVDSTGEIGGFEVLETSAAYWRGD 218
Query: 114 QK*KKFTE---CLWHIVS*SKEF----KEAKKYDHRILGLKQELVSLHE-WSPGSWFFLP 165
++ + T + S +E+ +EAK+ DHR LG + +L S+ + PG + P
Sbjct: 219 EERETLTRVYGTAFPTESDLQEYLARREEAKERDHRKLGREMDLFSIPDVTGPGLPLYHP 278
Query: 166 HGALIYNKLMDFIRNQYRHRGYQEVK 191
+G + +L +++R GY EV+
Sbjct: 279 NGKTVLRELSEYVRGLNSEMGYDEVE 304
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.329 0.146 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,153,398
Number of Sequences: 164201
Number of extensions: 957219
Number of successful extensions: 2609
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2437
Number of HSP's gapped (non-prelim): 144
length of query: 191
length of database: 59,974,054
effective HSP length: 104
effective length of query: 87
effective length of database: 42,897,150
effective search space: 3732052050
effective search space used: 3732052050
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Medicago: description of AC140849.7