BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140849.2 + phase: 0 
         (553 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I      45  6e-04
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13...    37  0.13
YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR...    36  0.23
TRUA_BACSP (Q45557) tRNA pseudouridine synthase A (EC 4.2.1.70) ...    35  0.67
CHIP_TOBAC (P17513) Acidic endochitinase P precursor (EC 3.2.1.1...    32  4.3
CD61_ARCFU (O29995) Cell division control protein 6 homolog 1 (C...    32  5.6
ATF1_YEAST (P40353) Alcohol O-acetyltransferase 1 (EC 2.3.1.84) ...    32  5.6
YICM_ECOLI (P31438) Hypothetical protein yicM                          31  7.4
KIP2_YEAST (P28743) Kinesin-like protein KIP2                          31  9.6

>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
          Length = 1261

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 52/241 (21%)

Query: 246  LVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKK-- 303
            L+S+ S+ K  D+  RVF                      E+ K L  +RK++ KS +  
Sbjct: 813  LISVLSKNKRFDAVQRVF----------------------EHSKHL--YRKISTKSLEKA 848

Query: 304  -------LDSVLIATVLASITQMANVL-PGCEIHGYVLRHGLESDVKVSSALIDMYSKCG 355
                   LD++++++  A   + +N+     ++ GY+ R          + LI+  ++ G
Sbjct: 849  NWFMALILDAMILSSSFARQFKSSNLFCDNMKMLGYIPR------ASTFAHLINNSTRRG 902

Query: 356  FLHLGTCVFRIMLER-------NIISYNSMILAYGLHGCASQAFTMFDEMLQKGLVPDEG 408
                 T    I  E        ++  YN+++   G     ++ + +F EM + GL+P   
Sbjct: 903  DTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSV 962

Query: 409  TFSALLSACCHAGLVKDGRELFWRMKDEFNIKARPEHYVYMVKLLGGVGELEEAYNLTQS 468
            T+  +++A C  G      +LF  M+++ N + R   Y  M++      E++  +N  ++
Sbjct: 963  TYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQF-----EVQTMFNREKA 1017

Query: 469  L 469
            L
Sbjct: 1018 L 1018



 Score = 34.7 bits (78), Expect = 0.67
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 57  AHHVFDKTSTR----SVFLWNSMIRAFAKARRFSNAISLFRTMLVDDIRPDNYTYACAIR 112
           A ++F++T       SVFL+N+++    +ARR +    LF+ M    + P + TY   I 
Sbjct: 910 ALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVIN 969

Query: 113 A 113
           A
Sbjct: 970 A 970


>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
           (Leucine-rich PPR-motif containing protein)
          Length = 1273

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 5/140 (3%)

Query: 336 GLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNI----ISYNSMILAYGLHGCASQA 391
           G   DV   +AL+ +Y +  +    T     M E NI    ++Y  +I +Y   G    A
Sbjct: 36  GAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGA 95

Query: 392 FTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDGRELFWRMKDEFNIKARPEHYVYMVK 451
             +   M  K L   E  FSAL++    AG +++   +   M+D   I+  P+ Y+ ++ 
Sbjct: 96  SKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDA-GIEPGPDTYLALLN 154

Query: 452 LLGGVGELEEAYNLTQSLPK 471
                G+++      + + K
Sbjct: 155 AYAEKGDIDHVKQTLEKVEK 174



 Score = 31.2 bits (69), Expect = 7.4
 Identities = 27/137 (19%), Positives = 58/137 (41%), Gaps = 8/137 (5%)

Query: 56  YAHHVFDKT----STRSVFLWNSMIRAFAKARRFSNAISLFRTMLVDDIRPDNYTYACAI 111
           +AH ++D      +   V  +N++++ + +     +       M   +I+P+  TY   I
Sbjct: 24  FAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLI 83

Query: 112 RACADSFDFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVF----DGIVE 167
            +  +  D      + G   +  L +     SALV+ +++ G +  A  +     D  +E
Sbjct: 84  ASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIE 143

Query: 168 PDLVLWNSLISAYGGSG 184
           P    + +L++AY   G
Sbjct: 144 PGPDTYLALLNAYAEKG 160


>YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR1
           intergenic region
          Length = 864

 Score = 36.2 bits (82), Expect = 0.23
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 6/82 (7%)

Query: 42  TQIIRLYAFNNHINYAHHVFDKTSTRS------VFLWNSMIRAFAKARRFSNAISLFRTM 95
           T +I+ Y+       A + FD     S      +  +N+M+R   K R F  A+ LF+ +
Sbjct: 324 TTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFPKALDLFQEI 383

Query: 96  LVDDIRPDNYTYACAIRACADS 117
              +I+P   TY    R  A S
Sbjct: 384 QDHNIKPTTNTYIMMARVLASS 405


>TRUA_BACSP (Q45557) tRNA pseudouridine synthase A (EC 4.2.1.70)
           (Pseudouridylate synthase I) (Pseudouridine synthase I)
           (Uracil hydrolyase)
          Length = 244

 Score = 34.7 bits (78), Expect = 0.67
 Identities = 28/108 (25%), Positives = 45/108 (40%), Gaps = 8/108 (7%)

Query: 31  KTHLSK--DPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKARRFSNA 88
           KT+L K  +  Y    +R Y+   HI    H+ +      +F+      AF+ A+     
Sbjct: 109 KTYLYKIWNEDYTHPFMRKYSL--HIEKKLHIDNMVKASQLFVGEHDFTAFSNAKSKKKT 166

Query: 89  ISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLRVVHGSAVSVGLG 136
                T  +  I   +      IR C D F + M+R + G+ + VGLG
Sbjct: 167 ----NTRTIHSITIQDNQGFIDIRVCGDGFLYNMVRKMVGTLIEVGLG 210


>CHIP_TOBAC (P17513) Acidic endochitinase P precursor (EC 3.2.1.14)
           (Pathogenesis-related protein P) (PR-P)
          Length = 253

 Score = 32.0 bits (71), Expect = 4.3
 Identities = 30/117 (25%), Positives = 48/117 (40%), Gaps = 11/117 (9%)

Query: 268 NPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASIT-QMANVLPGC 326
           NPDLV   A IS       ++ A+ F+            V+I +   S   Q AN  PGC
Sbjct: 147 NPDLVATDATIS-------FKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGC 199

Query: 327 EIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMILAYG 383
            +   ++  G+E  V  ++A+ D   + G+      +  +    N+  YN    A G
Sbjct: 200 GVITNIINGGIECGVGPNAAVED---RIGYYRRYCGMLNVAPGDNLDCYNQRNFAQG 253


>CD61_ARCFU (O29995) Cell division control protein 6 homolog 1 (CDC6
           homolog 1)
          Length = 409

 Score = 31.6 bits (70), Expect = 5.6
 Identities = 19/77 (24%), Positives = 35/77 (44%), Gaps = 8/77 (10%)

Query: 190 IQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSM 249
           + +  S  L G  P    + G  G    +++L + ++L   S+K+ L+   H        
Sbjct: 39  LALLLSPMLRGGTPSNIFIYGKTGTGKTATVLFVARQLEEASRKAKLNVAVH-------- 90

Query: 250 YSRCKCIDSAYRVFCGI 266
           Y  C+ +D+AYRV   +
Sbjct: 91  YINCEIVDTAYRVLASL 107


>ATF1_YEAST (P40353) Alcohol O-acetyltransferase 1 (EC 2.3.1.84)
           (AATase 1)
          Length = 525

 Score = 31.6 bits (70), Expect = 5.6
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 11/59 (18%)

Query: 423 VKDGRE---LFWRMKDEFN-IKARPEHYVYMVKLLGGVGELEEAYNLTQSLPKPVDKAI 477
           + DGR     F  ++DE N IK  P+   Y+ K        EE Y L + LP+P++K I
Sbjct: 193 MSDGRSSIHFFHDLRDELNNIKTPPKKLDYIFKY-------EEDYQLLRKLPEPIEKVI 244


>YICM_ECOLI (P31438) Hypothetical protein yicM
          Length = 412

 Score = 31.2 bits (69), Expect = 7.4
 Identities = 43/158 (27%), Positives = 68/158 (42%), Gaps = 26/158 (16%)

Query: 196 MRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQK---SGLDSDCHVGSLLVSMYSR 252
           M LAG   DG TL  L  GIA     S+   +   S K   +G      V +L+++++  
Sbjct: 260 MNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGS 319

Query: 253 CKCIDSAYRVFCGI-FNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIAT 311
            K + +   +  G+ F    V WS  I+               R L  +++K  S+ +A 
Sbjct: 320 DKIVATGVAIIWGLTFALVPVGWSTWIT---------------RSLADQAEKAGSIQVAV 364

Query: 312 VLASITQMANVLPGCEIHGYVLRH-GLESDVKVSSALI 348
           +     Q+AN   G  I GY L + GL S + +S  L+
Sbjct: 365 I-----QLANTC-GAAIGGYALDNIGLTSPLMLSGTLM 396


>KIP2_YEAST (P28743) Kinesin-like protein KIP2
          Length = 706

 Score = 30.8 bits (68), Expect = 9.6
 Identities = 16/54 (29%), Positives = 30/54 (54%), Gaps = 1/54 (1%)

Query: 352 SKCGFLHLGTCVFRIMLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKGLVP 405
           S C  L +     + M+++ ++ +N+ I AYG+ G + + FTM     + GL+P
Sbjct: 171 SHCTNLEVYERTSKPMIDKLLMGFNATIFAYGMTG-SGKTFTMSGNEQELGLIP 223


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.138    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,392,352
Number of Sequences: 164201
Number of extensions: 2608265
Number of successful extensions: 7114
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 7103
Number of HSP's gapped (non-prelim): 16
length of query: 553
length of database: 59,974,054
effective HSP length: 115
effective length of query: 438
effective length of database: 41,090,939
effective search space: 17997831282
effective search space used: 17997831282
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)