BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140721.8 + phase: 0 /pseudo
(59 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GL1J_ARATH (Q9FL89) Germin-like protein subfamily 1 member 19 pr... 48 4e-06
GL1H_ARATH (Q9FIC6) Germin-like protein subfamily 1 member 17 pr... 48 4e-06
GL1D_ARATH (P92997) Germin-like protein subfamily 1 member 13 pr... 48 5e-06
GL1F_ARATH (Q9FIC9) Germin-like protein subfamily 1 member 15 pr... 47 7e-06
GL17_ARATH (Q9SFF9) Germin-like protein subfamily 1 member 7 pre... 44 6e-05
GL1E_ARATH (Q9FID0) Germin-like protein subfamily 1 member 14 pr... 44 8e-05
GL14_ARATH (Q9M8X4) Germin-like protein subfamily 1 member 4 pre... 43 1e-04
GL1K_ARATH (P92996) Germin-like protein subfamily 1 member 20 pr... 42 2e-04
GL1I_ARATH (P92999) Germin-like protein subfamily 1 member 18 pr... 42 2e-04
GL1G_ARATH (Q9FIC8) Germin-like protein subfamily 1 member 16 pr... 42 2e-04
GL16_ARATH (Q9M8X6) Germin-like protein subfamily 1 member 6 pre... 42 3e-04
GL1C_ARATH (Q9FMA6) Putative germin-like protein subfamily 1 mem... 41 5e-04
GL13_ARATH (Q9M8X3) Germin-like protein subfamily 1 member 3 pre... 41 5e-04
GL19_ARATH (Q9FMB0) Putative germin-like protein subfamily 1 mem... 41 7e-04
GL18_ARATH (Q9LEA7) Germin-like protein subfamily 1 member 8 pre... 41 7e-04
GL15_ARATH (Q9M8X5) Germin-like protein subfamily 1 member 5 pre... 41 7e-04
GLP1_MESCR (P45852) Germin-like protein precursor 37 0.007
GL12_ARATH (Q9M8X1) Putative germin-like protein subfamily 1 mem... 37 0.010
GL1B_ARATH (Q9FMA8) Germin-like protein subfamily 1 member 11 pr... 35 0.037
GL1A_ARATH (Q9FMA9) Germin-like protein subfamily 1 member 10 pr... 34 0.082
>GL1J_ARATH (Q9FL89) Germin-like protein subfamily 1 member 19
precursor
Length = 221
Score = 48.1 bits (113), Expect = 4e-06
Identities = 23/34 (67%), Positives = 29/34 (84%), Gaps = 1/34 (2%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L+++ AL + IA AYDPSPLQDFCVAI DPK+G
Sbjct: 8 ILITLSALVT-IAKAYDPSPLQDFCVAIDDPKNG 40
>GL1H_ARATH (Q9FIC6) Germin-like protein subfamily 1 member 17
precursor
Length = 221
Score = 48.1 bits (113), Expect = 4e-06
Identities = 23/34 (67%), Positives = 29/34 (84%), Gaps = 1/34 (2%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L+++ AL + IA AYDPSPLQDFCVAI DPK+G
Sbjct: 8 ILITLSALVT-IAKAYDPSPLQDFCVAIDDPKNG 40
>GL1D_ARATH (P92997) Germin-like protein subfamily 1 member 13
precursor
Length = 222
Score = 47.8 bits (112), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (78%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L+++ AL S A AYDPSPLQDFCVAI D K+G
Sbjct: 8 ILITLSALVISFAEAYDPSPLQDFCVAIDDLKNG 41
>GL1F_ARATH (Q9FIC9) Germin-like protein subfamily 1 member 15
precursor
Length = 221
Score = 47.4 bits (111), Expect = 7e-06
Identities = 23/34 (67%), Positives = 28/34 (81%), Gaps = 1/34 (2%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L++ AL + IA AYDPSPLQDFCVAI DPK+G
Sbjct: 8 ILITFWALVT-IAKAYDPSPLQDFCVAIDDPKNG 40
>GL17_ARATH (Q9SFF9) Germin-like protein subfamily 1 member 7
precursor
Length = 229
Score = 44.3 bits (103), Expect = 6e-05
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 1 MKILYLLVSILALASSIAFAYDPSPLQDFCVAIKD 35
++ L +LALASS YDPSPLQDFCVA+ D
Sbjct: 5 LRFLVAKAILLALASSFVSCYDPSPLQDFCVAVDD 39
>GL1E_ARATH (Q9FID0) Germin-like protein subfamily 1 member 14
precursor
Length = 222
Score = 43.9 bits (102), Expect = 8e-05
Identities = 21/34 (61%), Positives = 26/34 (75%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L+++ AL S A A DPSPLQDFCVAI D K+G
Sbjct: 8 ILITLSALVISFAEANDPSPLQDFCVAIGDLKNG 41
>GL14_ARATH (Q9M8X4) Germin-like protein subfamily 1 member 4
precursor
Length = 222
Score = 43.1 bits (100), Expect = 1e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MKILYLLVSILALASSIAFAYDPSPLQDFCVAIKD 35
++ L + +LALASS + YDPSPLQD+CVA +
Sbjct: 5 LQFLLAKIILLALASSFVYCYDPSPLQDYCVATNE 39
>GL1K_ARATH (P92996) Germin-like protein subfamily 1 member 20
precursor (GLP2a copy 2) (Germin type 2) (GLP2b)
(At-GERM2) (AtGER2)
Length = 222
Score = 42.4 bits (98), Expect = 2e-04
Identities = 20/29 (68%), Positives = 22/29 (74%)
Query: 9 SILALASSIAFAYDPSPLQDFCVAIKDPK 37
+I+AL S AYDPSPLQDFCVAI D K
Sbjct: 11 AIIALVLSFVNAYDPSPLQDFCVAIDDLK 39
>GL1I_ARATH (P92999) Germin-like protein subfamily 1 member 18
precursor (GLP2a copy 1)
Length = 222
Score = 42.4 bits (98), Expect = 2e-04
Identities = 20/29 (68%), Positives = 22/29 (74%)
Query: 9 SILALASSIAFAYDPSPLQDFCVAIKDPK 37
+I+AL S AYDPSPLQDFCVAI D K
Sbjct: 11 AIIALVLSFVNAYDPSPLQDFCVAIDDLK 39
>GL1G_ARATH (Q9FIC8) Germin-like protein subfamily 1 member 16
precursor
Length = 222
Score = 42.4 bits (98), Expect = 2e-04
Identities = 20/29 (68%), Positives = 22/29 (74%)
Query: 9 SILALASSIAFAYDPSPLQDFCVAIKDPK 37
+I+AL S AYDPSPLQDFCVAI D K
Sbjct: 11 AIIALVLSFVNAYDPSPLQDFCVAIDDLK 39
>GL16_ARATH (Q9M8X6) Germin-like protein subfamily 1 member 6
precursor
Length = 227
Score = 42.0 bits (97), Expect = 3e-04
Identities = 23/59 (38%), Positives = 32/59 (53%), Gaps = 13/59 (22%)
Query: 1 MKILYLLVSILALASSIAFAYDPSPLQDFCVA-------------IKDPKDGDYSDLTH 46
+++L V +LALA+S YDP+PLQDFCVA KDPK +D ++
Sbjct: 6 LRLLVTQVILLALATSFVSCYDPNPLQDFCVAASETNRVFVNGKFCKDPKSVTANDFSY 64
>GL1C_ARATH (Q9FMA6) Putative germin-like protein subfamily 1
member 12 precursor
Length = 223
Score = 41.2 bits (95), Expect = 5e-04
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 1 MKILYLLVSILALASSIAFAY--DPSPLQDFCVAIKDP 36
MK LYL + L AS++ FA DPSPLQDFC+ + P
Sbjct: 3 MKNLYLAILYLLAASTLPFAIASDPSPLQDFCIGVNTP 40
>GL13_ARATH (Q9M8X3) Germin-like protein subfamily 1 member 3
precursor
Length = 227
Score = 41.2 bits (95), Expect = 5e-04
Identities = 17/28 (60%), Positives = 22/28 (77%)
Query: 8 VSILALASSIAFAYDPSPLQDFCVAIKD 35
+ +LALASS YDPSPLQD+CVA+ +
Sbjct: 12 IILLALASSFVSCYDPSPLQDYCVAVPE 39
>GL19_ARATH (Q9FMB0) Putative germin-like protein subfamily 1
member 9 precursor
Length = 222
Score = 40.8 bits (94), Expect = 7e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 7 LVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
++SILA+ S++ A DPS LQDFCV + P DG
Sbjct: 9 VLSILAITLSLSKASDPSSLQDFCVGVNTPADG 41
>GL18_ARATH (Q9LEA7) Germin-like protein subfamily 1 member 8
precursor
Length = 222
Score = 40.8 bits (94), Expect = 7e-04
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 8 VSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+S+ AL + A DPSPLQDFCV + P DG
Sbjct: 12 LSLFALTLPLVIASDPSPLQDFCVGVNTPADG 43
>GL15_ARATH (Q9M8X5) Germin-like protein subfamily 1 member 5
precursor
Length = 222
Score = 40.8 bits (94), Expect = 7e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 1 MKILYLLVSILALASSIAFAYDPSPLQDFCVAIKD 35
+ L + +LALASS + Y+PSPLQD+CVA +
Sbjct: 5 LHFLLAKIILLALASSFVYCYEPSPLQDYCVATNE 39
>GLP1_MESCR (P45852) Germin-like protein precursor
Length = 233
Score = 37.4 bits (85), Expect = 0.007
Identities = 16/36 (44%), Positives = 22/36 (60%)
Query: 4 LYLLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
++ V +LA A+A DP+ LQDFCV + P DG
Sbjct: 6 MFAFVVLLATTLYQAYATDPTQLQDFCVGVNKPNDG 41
>GL12_ARATH (Q9M8X1) Putative germin-like protein subfamily 1
member 2 precursor
Length = 229
Score = 37.0 bits (84), Expect = 0.010
Identities = 15/32 (46%), Positives = 22/32 (67%)
Query: 1 MKILYLLVSILALASSIAFAYDPSPLQDFCVA 32
++ L + +L LAS+ YDP+PLQD+CVA
Sbjct: 5 VQFLVAKIILLVLASTFVHCYDPNPLQDYCVA 36
>GL1B_ARATH (Q9FMA8) Germin-like protein subfamily 1 member 11
precursor
Length = 223
Score = 35.0 bits (79), Expect = 0.037
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 7 LVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
++S+LAL +A A DPS LQDFCV+ +G
Sbjct: 11 VLSLLALTLPLAIASDPSQLQDFCVSANTSANG 43
>GL1A_ARATH (Q9FMA9) Germin-like protein subfamily 1 member 10
precursor
Length = 223
Score = 33.9 bits (76), Expect = 0.082
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 1 MKILYLL--VSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
MK L L +S+LAL + A DPS LQDFCV+ +G
Sbjct: 3 MKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANG 43
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.328 0.145 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,050,702
Number of Sequences: 164201
Number of extensions: 199797
Number of successful extensions: 715
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 686
Number of HSP's gapped (non-prelim): 30
length of query: 59
length of database: 59,974,054
effective HSP length: 35
effective length of query: 24
effective length of database: 54,227,019
effective search space: 1301448456
effective search space used: 1301448456
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC140721.8