BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140670.15 - phase: 0
(682 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DNAJ_METMA (P35515) Chaperone protein dnaJ 55 5e-07
DJH5_ARATH (Q9FH28) J domain protein At5g49060 54 1e-06
DNAJ_LISMO (Q9S5A3) Chaperone protein dnaJ 54 2e-06
DNAJ_LISIN (Q92BN9) Chaperone protein dnaJ 54 2e-06
DNAJ_STAEP (Q8CP18) Chaperone protein dnaJ (HSP40) 52 7e-06
DNAJ_METTE (Q9UXR9) Chaperone protein dnaJ (Heat shock protein 40) 52 7e-06
DNAJ_DEIRA (Q9RUG2) Chaperone protein dnaJ 52 7e-06
DJBC_MOUSE (Q9QYI4) DnaJ homolog subfamily B member 12 (mDJ10) 51 9e-06
DJB5_HUMAN (O75953) DnaJ homolog subfamily B member 5 (Heat shoc... 51 9e-06
DJBC_HUMAN (Q9NXW2) DnaJ homolog subfamily B member 12 51 1e-05
DNAJ_STAAW (P63972) Chaperone protein dnaJ (HSP40) 50 2e-05
DNAJ_STAAN (P63971) Chaperone protein dnaJ (HSP40) 50 2e-05
DNAJ_STAAM (P63970) Chaperone protein dnaJ (HSP40) 50 2e-05
DNAJ_STAAU (P45555) Chaperone protein dnaJ (HSP40) 49 3e-05
CBPA_SHIFL (Q7C254) Curved DNA-binding protein 49 3e-05
CBPA_SALTY (P63263) Curved DNA-binding protein 49 3e-05
CBPA_SALTI (P63262) Curved DNA-binding protein 49 3e-05
CBPA_ECOLI (P36659) Curved DNA-binding protein 49 3e-05
CBPA_ECOL6 (Q8FJ50) Curved DNA-binding protein 49 3e-05
CBPA_ECO57 (Q7AFV7) Curved DNA-binding protein 49 3e-05
>DNAJ_METMA (P35515) Chaperone protein dnaJ
Length = 389
Score = 55.5 bits (132), Expect = 5e-07
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y I+GL+ +++E +KK Y+K+A HPD NK GA+ F +SEA+A LS D ++
Sbjct: 6 DYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLS---DAEK 62
Query: 126 NAQLGAGNGVNHKGLSSVHAS 146
AQ + H G+ + +++
Sbjct: 63 RAQY---DRFGHAGIDNQYSA 80
>DJH5_ARATH (Q9FH28) J domain protein At5g49060
Length = 350
Score = 54.3 bits (129), Expect = 1e-06
Identities = 24/72 (33%), Positives = 46/72 (63%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y+I+GL + +++ ++K Y+K++ +HPD NK G++ AF VS+A+ LS ++
Sbjct: 99 DYYAILGLEKNCSVDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQ 158
Query: 126 NAQLGAGNGVNH 137
Q+G + +H
Sbjct: 159 FDQVGIVDEFDH 170
>DNAJ_LISMO (Q9S5A3) Chaperone protein dnaJ
Length = 377
Score = 53.5 bits (127), Expect = 2e-06
Identities = 30/84 (35%), Positives = 48/84 (56%), Gaps = 4/84 (4%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y ++G++ S + + +KK Y+K++ HPD NK GAD F +SEA+ LS D ++
Sbjct: 5 DYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALS---DPQK 61
Query: 126 NAQLGAGNGVN-HKGLSSVHASGG 148
AQ V+ ++G A GG
Sbjct: 62 RAQYDQYGHVDPNQGFGGGGAGGG 85
>DNAJ_LISIN (Q92BN9) Chaperone protein dnaJ
Length = 376
Score = 53.5 bits (127), Expect = 2e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLS------- 118
D+Y ++G++ S + + +KK Y+K++ HPD NK GAD F +SEA+ LS
Sbjct: 5 DYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQ 64
Query: 119 ----GSYDMKRNAQLGAGNGVNHKGLS 141
G D + GAG G G S
Sbjct: 65 YDQYGHVDPNQGFGGGAGGGFGGGGFS 91
>DNAJ_STAEP (Q8CP18) Chaperone protein dnaJ (HSP40)
Length = 373
Score = 51.6 bits (122), Expect = 7e-06
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y ++G+N S + + +KK Y+K++ HPD NK GAD F +SEA+ LS
Sbjct: 5 DYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRAN 64
Query: 126 NAQLGAGNGVNHKGLSSVHAS--GGNQDTF 153
Q G G S GG +D F
Sbjct: 65 YDQFGHDGPQGGFGSQGFGGSDFGGFEDIF 94
>DNAJ_METTE (Q9UXR9) Chaperone protein dnaJ (Heat shock protein 40)
Length = 387
Score = 51.6 bits (122), Expect = 7e-06
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y I+GL+ E +KK Y+K+A HPD NK GA+ F +SEA+A LS D ++
Sbjct: 6 DYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLS---DPEK 62
Query: 126 NAQ 128
AQ
Sbjct: 63 RAQ 65
>DNAJ_DEIRA (Q9RUG2) Chaperone protein dnaJ
Length = 376
Score = 51.6 bits (122), Expect = 7e-06
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 65 LDWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMK 124
+D+Y ++G++ + + + +K Y+K+A LHPD NK GA F VSEA++ LS +
Sbjct: 1 MDYYELLGVSRTASADEIKSAYRKLALKLHPDRNKEEGAAEKFAQVSEAYSVLSDTEKRA 60
Query: 125 RNAQLGAGNGVNHKGLSSVHASGG 148
+ G+ G G GG
Sbjct: 61 HYDRFGSAPGAGMPGGDXFGGMGG 84
>DJBC_MOUSE (Q9QYI4) DnaJ homolog subfamily B member 12 (mDJ10)
Length = 376
Score = 51.2 bits (121), Expect = 9e-06
Identities = 37/141 (26%), Positives = 65/141 (45%), Gaps = 19/141 (13%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSG------ 119
D+Y I+G++ S + E +KK Y+K+A HPD N GA AF + A+A LS
Sbjct: 111 DYYEILGVSRSASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQ 170
Query: 120 ----SYDMKRNAQLGAGNGVNHKG---------LSSVHASGGNQDTFWTICTSCKVQYEY 166
D + A+ G +G H+G L ++ GG + + ++ +++Y Y
Sbjct: 171 YDQFGDDKSQAARHGHSHGDFHRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTY 230
Query: 167 LRKYVNKKLSCKNCRGIFIAL 187
++ + G+F+ L
Sbjct: 231 QQRQDRRDNQGDGGLGVFVQL 251
>DJB5_HUMAN (O75953) DnaJ homolog subfamily B member 5 (Heat shock
protein Hsp40-3) (Heat shock protein cognate 40) (Hsc40)
(Hsp40-2)
Length = 348
Score = 51.2 bits (121), Expect = 9e-06
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLS-----GS 120
D+Y I+G+ N + +KK Y+KMA HPD NK A+ F ++EA+ LS G
Sbjct: 4 DYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGL 63
Query: 121 YDMKRNAQLGAGNGVNHKGLSSVH 144
YD L G G + S H
Sbjct: 64 YDQYGEEGLKTGGGTSGGSSGSFH 87
>DJBC_HUMAN (Q9NXW2) DnaJ homolog subfamily B member 12
Length = 375
Score = 50.8 bits (120), Expect = 1e-05
Identities = 36/141 (25%), Positives = 65/141 (45%), Gaps = 19/141 (13%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSG------ 119
D+Y I+G++ + E +KK Y+++A HPD N GA AF + A+A LS
Sbjct: 110 DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQ 169
Query: 120 ----SYDMKRNAQLGAGNGVNHKG---------LSSVHASGGNQDTFWTICTSCKVQYEY 166
D + A+ G G+G H+G L ++ GG + + ++ +++Y Y
Sbjct: 170 YDQFGDDKSQAARHGHGHGDFHRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTY 229
Query: 167 LRKYVNKKLSCKNCRGIFIAL 187
++ + G+F+ L
Sbjct: 230 QQRQDRRDNQGDGGLGVFVQL 250
>DNAJ_STAAW (P63972) Chaperone protein dnaJ (HSP40)
Length = 379
Score = 50.1 bits (118), Expect = 2e-05
Identities = 34/98 (34%), Positives = 50/98 (50%), Gaps = 11/98 (11%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLS-----GS 120
D+Y ++G++ + + +KK Y+K++ HPD NK GAD F +SEA+ LS S
Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRAS 64
Query: 121 YD-MKRNAQLGAG----NGVNHKGLSSVHASGGNQDTF 153
YD + G G NG + G S GG +D F
Sbjct: 65 YDQFGHDGPQGFGGQGFNGSDFGGFSG-FGGGGFEDIF 101
>DNAJ_STAAN (P63971) Chaperone protein dnaJ (HSP40)
Length = 379
Score = 50.1 bits (118), Expect = 2e-05
Identities = 34/98 (34%), Positives = 50/98 (50%), Gaps = 11/98 (11%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLS-----GS 120
D+Y ++G++ + + +KK Y+K++ HPD NK GAD F +SEA+ LS S
Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRAS 64
Query: 121 YD-MKRNAQLGAG----NGVNHKGLSSVHASGGNQDTF 153
YD + G G NG + G S GG +D F
Sbjct: 65 YDQFGHDGPQGFGGQGFNGSDFGGFSG-FGGGGFEDIF 101
>DNAJ_STAAM (P63970) Chaperone protein dnaJ (HSP40)
Length = 379
Score = 50.1 bits (118), Expect = 2e-05
Identities = 34/98 (34%), Positives = 50/98 (50%), Gaps = 11/98 (11%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLS-----GS 120
D+Y ++G++ + + +KK Y+K++ HPD NK GAD F +SEA+ LS S
Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRAS 64
Query: 121 YD-MKRNAQLGAG----NGVNHKGLSSVHASGGNQDTF 153
YD + G G NG + G S GG +D F
Sbjct: 65 YDQFGHDGPQGFGGQGFNGSDFGGFSG-FGGGGFEDIF 101
>DNAJ_STAAU (P45555) Chaperone protein dnaJ (HSP40)
Length = 379
Score = 49.3 bits (116), Expect = 3e-05
Identities = 32/97 (32%), Positives = 46/97 (46%), Gaps = 9/97 (9%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y ++G++ + + +KK Y+K++ HPD NK GAD F +SEA+ LS
Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRAT 64
Query: 126 NAQLG-------AGNGVNHK--GLSSVHASGGNQDTF 153
Q G G G N G S GG +D F
Sbjct: 65 IDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIF 101
>CBPA_SHIFL (Q7C254) Curved DNA-binding protein
Length = 306
Score = 49.3 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y+IMG+ P+ +++ +K Y+++A HPD +K A+ F V+EAW LS D +R
Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLS---DEQR 61
Query: 126 NAQ 128
A+
Sbjct: 62 RAE 64
>CBPA_SALTY (P63263) Curved DNA-binding protein
Length = 306
Score = 49.3 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y+IMG+ P+ +++ +K Y+++A HPD +K A+ F V+EAW LS D +R
Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLS---DEQR 61
Query: 126 NAQ 128
A+
Sbjct: 62 RAE 64
>CBPA_SALTI (P63262) Curved DNA-binding protein
Length = 306
Score = 49.3 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y+IMG+ P+ +++ +K Y+++A HPD +K A+ F V+EAW LS D +R
Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLS---DEQR 61
Query: 126 NAQ 128
A+
Sbjct: 62 RAE 64
>CBPA_ECOLI (P36659) Curved DNA-binding protein
Length = 306
Score = 49.3 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y+IMG+ P+ +++ +K Y+++A HPD +K A+ F V+EAW LS D +R
Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLS---DEQR 61
Query: 126 NAQ 128
A+
Sbjct: 62 RAE 64
>CBPA_ECOL6 (Q8FJ50) Curved DNA-binding protein
Length = 306
Score = 49.3 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y+IMG+ P+ +++ +K Y+++A HPD +K A+ F V+EAW LS D +R
Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLS---DEQR 61
Query: 126 NAQ 128
A+
Sbjct: 62 RAE 64
>CBPA_ECO57 (Q7AFV7) Curved DNA-binding protein
Length = 306
Score = 49.3 bits (116), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 66 DWYSIMGLNPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKR 125
D+Y+IMG+ P+ +++ +K Y+++A HPD +K A+ F V+EAW LS D +R
Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLS---DEQR 61
Query: 126 NAQ 128
A+
Sbjct: 62 RAE 64
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,456,432
Number of Sequences: 164201
Number of extensions: 3943043
Number of successful extensions: 8047
Number of sequences better than 10.0: 195
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 7878
Number of HSP's gapped (non-prelim): 217
length of query: 682
length of database: 59,974,054
effective HSP length: 117
effective length of query: 565
effective length of database: 40,762,537
effective search space: 23030833405
effective search space used: 23030833405
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)
Medicago: description of AC140670.15