BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140549.7 + phase: 0
(985 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TRA0_MYCSM (P35883) Transposase for insertion sequence element I... 40 0.040
SPKC_SYNY3 (P74745) Serine/threonine-protein kinase C (EC 2.7.1.37) 40 0.040
TRA5_LACLA (P35881) Transposase for insertion sequence element I... 39 0.068
I4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 g... 37 0.20
TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36) 37 0.34
EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein) 37 0.34
YA3B_SCHPO (Q09716) Hypothetical protein C18B11.11 in chromosome I 36 0.44
POLG_TUMVQ (Q02597) Genome polyprotein [Contains: P1 proteinase ... 36 0.44
BAG3_MOUSE (Q9JLV1) BAG-family molecular chaperone regulator-3 (... 36 0.44
MAP4_BOVIN (P36225) Microtubule-associated protein 4 (MAP 4) (Mi... 36 0.58
POLG_PRSVH (Q01901) Genome polyprotein [Contains: P1 proteinase ... 35 0.76
I4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 g... 35 0.76
BSN_MOUSE (O88737) Bassoon protein 35 0.76
Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92) 35 0.99
TONB_HELPJ (Q9ZJP4) TonB protein 35 0.99
POLG_TUMVJ (P89509) Genome polyprotein [Contains: P1 proteinase ... 35 0.99
MAP4_HUMAN (P27816) Microtubule-associated protein 4 (MAP 4) 35 0.99
PCAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associa... 35 1.3
GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin) 35 1.3
PCLO_MOUSE (Q9QYX7) Piccolo protein (Presynaptic cytomatrix prot... 34 1.7
>TRA0_MYCSM (P35883) Transposase for insertion sequence element
IS6120
Length = 323
Score = 39.7 bits (91), Expect = 0.040
Identities = 41/153 (26%), Positives = 60/153 (38%), Gaps = 20/153 (13%)
Query: 327 MLRKLLSSKMNMHKVIVTDRDMSLMKAVAHVFPESYALNCFFHVQANVKQRCVLNCKYPL 386
+LR M + + D + KAV VFP + C+FH QANV + +P
Sbjct: 113 LLRDCKRRGMTAPVLAIGDGALGFWKAVREVFPATKEQRCWFHKQANV-LAALPKSAHPS 171
Query: 387 GFKKDGKEVSNRDVVKKIMNAWKAMVESPNQQLYANALVEFKDSCSDFPIFVDYAMTTLD 446
KE+ N + + K A KA E+ Y A+ + D F Y
Sbjct: 172 ALAAI-KEIYNAEDIDKAQIAVKAF-EADFGAKYPKAVAKITDDLDVLLEFYKYP----- 224
Query: 447 EVKDKIVRAWTDHVLHLGCRTTNRVESAHALLK 479
+H +HL RTTN +ES A ++
Sbjct: 225 ----------AEHWIHL--RTTNPIESTFATVR 245
>SPKC_SYNY3 (P74745) Serine/threonine-protein kinase C (EC 2.7.1.37)
Length = 535
Score = 39.7 bits (91), Expect = 0.040
Identities = 36/134 (26%), Positives = 55/134 (40%), Gaps = 4/134 (2%)
Query: 618 AIVERLKKLPFQM-KLEVKEGLRQLAFPETTLMSPPPRKVPTKGAKKKVDIARSKGKITS 676
A+ E ++ P + LE + L + P T +P P P+ + + ++ IT
Sbjct: 376 AVEEPTEETPIPLPSLEPRPNLFETPSPIPTPATPSPEPTPSPSPSPETTSSPTEDTITP 435
Query: 677 TSRIPSSWEVVDSQNPDSQPSPSPTTSSYKRKKGARLGKTSLSPLPPPTRYPKPKAIPVM 736
PS E + P+ +PSPSPT S + + P P P+ PKP P +
Sbjct: 436 MEPEPSLDE--PAPIPEPKPSPSPTISPQPSPTISIPVTPAPVPKPSPSPTPKPTVPPQI 493
Query: 737 RPIDYMPRFMVPFI 750
P P VP I
Sbjct: 494 SPTP-QPSNTVPVI 506
>TRA5_LACLA (P35881) Transposase for insertion sequence element
IS905
Length = 391
Score = 38.9 bits (89), Expect = 0.068
Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 235 LISKLEEHNYTYYSRTQLESNTIEDIFWAHPTSIKLFNNFPTVLVMDSTY----KTNMYR 290
+I ++ H+Y+ + + + T E++ H S++ N+ +VL +D TY + + +
Sbjct: 120 IIERMYGHHYSPATISNISKATQENVATFHERSLEA--NY-SVLFLDGTYLPLRRGTVSK 176
Query: 291 MPMFEVVGVTSTDLTYSVGFGFMTHEKEENFVWVLTMLRKLLSSKMNMHKVIVTDRDMSL 350
+ +G+T +G+ +E N W T+L KL + + ++VTD L
Sbjct: 177 ECIHIALGITPEGQKAVLGYEIAPNEN--NASWS-TLLDKLQNQGIQQVSLVVTDGFKGL 233
Query: 351 MKAVAHVFPESYALNCFFHVQANVKQR 377
+ ++ +P + C H+ N+ +
Sbjct: 234 EQIISQAYPLAKQQRCLIHISRNLASK 260
>I4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4
gamma 3 (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3)
(eIF-4-gamma II) (eIF4GII)
Length = 1585
Score = 37.4 bits (85), Expect = 0.20
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 866 GPPPPGNQKTPILCLGAI---------PNHFVLISLKNGCPLPPLSTEWHNHKKEDAVTW 916
G PG + P+L +G+ P + +S+K L W +K D+
Sbjct: 685 GRQTPGGRGVPLLNVGSRRSQPGQRREPRKIITVSVKEDVHLKKAENAWKPSQKRDSQAD 744
Query: 917 EDEYLDRHDLFRKLMAIESGNKPCKPQKESNKAAPILLDTPEKPKQQFEVIAKDEEDSMS 976
+ E + +LFRK+ +I + P + + + + +DT E+ K +++ + D S
Sbjct: 745 DPENIKTQELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVIDLVFEKAIDEPS 804
Query: 977 LDL 979
+
Sbjct: 805 FSV 807
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)
Length = 3164
Score = 36.6 bits (83), Expect = 0.34
Identities = 25/88 (28%), Positives = 39/88 (43%), Gaps = 3/88 (3%)
Query: 644 PETTLMSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPSPSPTTS 703
P T+ +P P +VP G ++++ S +PS W+ D P +P+ TS
Sbjct: 2780 PLTSGPAPTPPRVPVGGPQRRLTRPAVASLSESRESLPSPWDPADPTAPVLGRNPAEPTS 2839
Query: 704 SYKRKKGARLGKTSLSPL-PPPTRYPKP 730
S G ++ P+ PPPT P P
Sbjct: 2840 S--SPAGPSPPPPAVQPVAPPPTSGPPP 2865
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)
Length = 283
Score = 36.6 bits (83), Expect = 0.34
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 644 PETTLMSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPSPSPTTS 703
P+ P P K PTKG K + + K T + PS P + P P+P T
Sbjct: 39 PKPPAKGPKPEKPPTKGHGHKPEKPPKEHKPTPPTYTPSP----KPTPPPATPKPTPPTY 94
Query: 704 SYKRKKGARLGKTSLSPLPPPTRYPKPKAIPVMRPIDY 741
+ K + + PPT P PK P +P Y
Sbjct: 95 TPSPKPKSPVYPPPPKASTPPTYTPSPKP-PATKPPTY 131
>YA3B_SCHPO (Q09716) Hypothetical protein C18B11.11 in chromosome I
Length = 1294
Score = 36.2 bits (82), Expect = 0.44
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 461 LHLGCRTTNRVESAHALLKKYLDNSVGDLGTCWEKIHHMLLLQFT 505
L LGC TT R + A LLK++L+ G +E++ + LLL++T
Sbjct: 904 LFLGCETTERAQLASFLLKEFLNLKNGSHFEGYERVFYELLLRYT 948
>POLG_TUMVQ (Q02597) Genome polyprotein [Contains: P1 proteinase
(N-terminal protein); Helper component proteinase (EC
3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1);
Cytoplasmic inclusion protein (CI); 6 kDa protein 2
(6K2); Viral genome-linked p
Length = 3163
Score = 36.2 bits (82), Expect = 0.44
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 394 EVSNRDVVKKIMNAWKAMVESPNQQLYANALVEFKDSCSDFPIFVDYAMTTLDEV----- 448
+ D V KI+N K +V + +Y L E +D ++ +FVD+ +++ E+
Sbjct: 1199 DAERSDCVTKILNKLKGLVATVEPTVYHQTLNEIEDDLNERNLFVDFELSSDSEMLQQLP 1258
Query: 449 KDKIVRAWTDHVLHLG 464
+K +W H L G
Sbjct: 1259 AEKTFASWWSHQLSRG 1274
>BAG3_MOUSE (Q9JLV1) BAG-family molecular chaperone regulator-3
(BCL-2 binding athanogene-3) (BAG-3) (Bcl-2-binding
protein Bis)
Length = 577
Score = 36.2 bits (82), Expect = 0.44
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 10/140 (7%)
Query: 652 PPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPSPSPTTSSYKRKKGA 711
PP +P + +++ D SK + EV S P PSPSP S+
Sbjct: 338 PPGHIPIQVIRREAD---SKPVSQKSPPPAEKVEVKVSSAPIPCPSPSPAPSAVPSPPKN 394
Query: 712 RLGKTSLSPLPPPTRYPKPKAIPVMRPIDYMPRFMVPFIEKVVDVIGDGHCGFRAIAEFM 771
+ +P P P PK+ P + P + KV ++ +A+ F
Sbjct: 395 VAAEQKAAPSPAPAEPAAPKSGEAETPPKH------PGVLKVEAILEKVQGLEQAVDSFE 448
Query: 772 G-LTEKNHLMIRTHLIQELM 790
G T+K +LMI +L +EL+
Sbjct: 449 GKKTDKKYLMIEEYLTKELL 468
>MAP4_BOVIN (P36225) Microtubule-associated protein 4 (MAP 4)
(Microtubule-associated protein-U) (MAP-U)
Length = 1072
Score = 35.8 bits (81), Expect = 0.58
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 28/155 (18%)
Query: 599 LSMGEQ----SNEDAFCVEVELKAIVERLKKLPFQMKLEVK--EGLRQLAFPETTLMSPP 652
++MG++ ++ED+ E+E K + +LP + K EG + + +PP
Sbjct: 577 VAMGQKHSLPTDEDSVLEELEQKKPSSQTSELPSETSGVAKPEEGPPTGSVSGNDITAPP 636
Query: 653 PRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQP-SPSPTTSSYKRKKGA 711
+++P KK +A ++ TSTS+ + P S P +PTT KK
Sbjct: 637 NKELPPSPEKKTKPLATTQPAKTSTSKAKT--------QPTSLPKQTAPTTLGGSNKKPM 688
Query: 712 RLGKTSLSPLPP-------------PTRYPKPKAI 733
L S+ PP P++ KPK +
Sbjct: 689 SLASGSVPAAPPKRPAAATSRPSTLPSKDTKPKPV 723
>POLG_PRSVH (Q01901) Genome polyprotein [Contains: P1 proteinase
(N-terminal protein); Helper component proteinase (EC
3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1);
Cytoplasmic inclusion protein (CI); 6 kDa protein 2
(6K2); Viral genome-linked p
Length = 3344
Score = 35.4 bits (80), Expect = 0.76
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 394 EVSNRDVVKKIMNAWKAMVESPNQQLYANALVEFKDSCSDFPIFVDYAMTTLDEVK---- 449
+V D V +I+N +K ++ S N +Y +L + +D D + +D+ +T +++
Sbjct: 1373 DVDKSDCVYRILNKFKGVINSSNTNVYHQSLDDIRDFYEDKQLTIDFDITGENQINRGPI 1432
Query: 450 DKIVRAWTDHVL 461
D W D+ L
Sbjct: 1433 DVTFEKWWDNQL 1444
>I4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4
gamma 3 (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3)
(eIF-4-gamma II) (eIF4GII)
Length = 1579
Score = 35.4 bits (80), Expect = 0.76
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 870 PGNQKTPILCLGAI---------PNHFVLISLKNGCPLPPLSTEWHNHKKEDAVTWEDEY 920
PG + P+L +G P + +S+K L W +K D+ + E
Sbjct: 684 PGGRGVPLLNVGPRRSQPGQRREPRKIITVSVKEDVHLRKAENAWKPSQKRDSHADDPES 743
Query: 921 LDRHDLFRKLMAIESGNKPCKPQKESNKAAPILLDTPEKPKQQFEVIAKDEEDSMSLDL 979
+ +LFRK+ +I + P + + + + +DT E+ K +++ + D S +
Sbjct: 744 IKTQELFRKVRSILNKLTPQMFNQLMKQVSALTVDTEERLKGVIDLVFEKAIDEPSFSV 802
>BSN_MOUSE (O88737) Bassoon protein
Length = 3941
Score = 35.4 bits (80), Expect = 0.76
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Query: 649 MSPPPRKVPTKGAKK--KVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPSPSPTTSSYK 706
+ P +P K + + K +K +T P + + P PS T+SS +
Sbjct: 559 LGQPSGSLPAKASPQATKASPQATKASPQATKASPQTTKASPQAKPLRATEPSKTSSSAQ 618
Query: 707 RKKGARLGKTSLSPLPPPTR-----YPKPK--------AIPVMRPIDYMPR 744
KK A K P PPP PK K A PV++P+ P+
Sbjct: 619 EKKTATPAKAEPVPKPPPETTVPPGTPKAKSGVKRTDPATPVVKPVPEAPK 669
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)
Length = 279
Score = 35.0 bits (79), Expect = 0.99
Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 650 SPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSW-EVVDSQNPDSQPSPSPTTSSYKRK 708
SP P PT S S + PS S P P+PSPT +
Sbjct: 106 SPTPTPSPTPSPTPTPSPTPSPTPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTP 165
Query: 709 KGARLGKTSLSPLPPPTRYPKPKAIPVMRPIDYMP 743
+ SP PPP+ P P P+ P+ Y P
Sbjct: 166 SPTPTPSPTPSPTPPPSPTPPPSPSPLGDPM-YFP 199
Score = 32.0 bits (71), Expect = 8.4
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 4/95 (4%)
Query: 644 PETTLMSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPSPSPTTS 703
P TL SP P PT + + + S P+ + +P PSP+PT S
Sbjct: 83 PSPTL-SPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTP---SPTPSPTPTPSPTPTPS 138
Query: 704 SYKRKKGARLGKTSLSPLPPPTRYPKPKAIPVMRP 738
+ S +P P PT P P P P
Sbjct: 139 PTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSP 173
>TONB_HELPJ (Q9ZJP4) TonB protein
Length = 280
Score = 35.0 bits (79), Expect = 0.99
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 622 RLKKLPFQMKLEVKEGLRQLAFPETTLMSPPPRKVPTKGAKKKVDIARSKGKITSTSRIP 681
+L K+ + + L + F L P + G K + S I + S
Sbjct: 9 KLSKVSTSVSFLISFALYAIGFGYFLLREDAPEPLAQAGTTK---VTMSLASINTNSNTK 65
Query: 682 SSWEVVDSQNPDSQPSPSPTTSSYKRKKGARLGKTSLSPLPPPTRYPKPKAIPVMRP 738
++ E S P +P P K+++ + K P P P PKPK P +P
Sbjct: 66 TNAE---SAKPKEEPKEKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPKPKPEPKP 119
>POLG_TUMVJ (P89509) Genome polyprotein [Contains: P1 proteinase
(N-terminal protein); Helper component proteinase (EC
3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1);
Cytoplasmic inclusion protein (CI); 6 kDa protein 2
(6K2); Viral genome-linked p
Length = 3164
Score = 35.0 bits (79), Expect = 0.99
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 394 EVSNRDVVKKIMNAWKAMVESPNQQLYANALVEFKDSCSDFPIFVDYAMTTLDEV----- 448
+ D V KI+N K +V + +Y L + +D S+ +FVD+ +++ ++
Sbjct: 1199 DAERSDCVTKILNKLKGLVATVEPTVYHQTLNDIEDDLSERNLFVDFELSSDGDMLQQLP 1258
Query: 449 KDKIVRAWTDHVLHLG 464
+K +W +H L G
Sbjct: 1259 TEKTFASWWNHQLSRG 1274
>MAP4_HUMAN (P27816) Microtubule-associated protein 4 (MAP 4)
Length = 1152
Score = 35.0 bits (79), Expect = 0.99
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 635 KEGLRQLAFPETTLMSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDS 694
+EG ++ + +PP +++P KK +A ++ TSTS+ + P S
Sbjct: 672 EEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKT--------QPTS 723
Query: 695 QP-SPSPTTSSYKRKKGARLGKTSLSPLPPPTRYPKPKAIPVMRP 738
P P+PTT KK L + L P PP R A P + P
Sbjct: 724 LPKQPAPTTIGGLNKKPMSLA-SGLVPAAPPKRPAVASARPSILP 767
>PCAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated
protein (PC2 glutamine/Q-rich-associated protein)
(TPA-inducible gene-1) (TIG-1) (Activator-recruited
cofactor 105 kDa component) (ARC105) (CTG repeat protein
7a)
Length = 788
Score = 34.7 bits (78), Expect = 1.3
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 643 FPETTLMSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPSPSPTT 702
FP TT +S P G + +++S + S+ + S P QPSP P
Sbjct: 401 FPPTTAVSAIPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQ 460
Query: 703 SSYKRKKGARLGKTSLSPLPPPTRY-PKPKAIPVMRPI 739
S + G P P P+ + P P P P+
Sbjct: 461 PSSQPNSNVSSG-----PAPSPSSFLPSPSPQPSQSPV 493
>GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin)
Length = 319
Score = 34.7 bits (78), Expect = 1.3
Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 646 TTLMSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPSPSPTTSSY 705
T + P P+ P ++++ + + + + P + Q P QP P P+ Y
Sbjct: 19 TAVRVPVPQLQPQNPSQQQ---PQEQVPLVQQQQFPGQQQQFPPQQPYPQPQPFPSQQPY 75
Query: 706 KRKKGARLGKTSLSPLPPPTRYPKPKAIPVMRPI-DYMPRFMVP 748
+ + P PP YP+P++ P +P P+++ P
Sbjct: 76 LQLQPF----PQPQPFPPQLPYPQPQSFPPQQPYPQQQPQYLQP 115
>PCLO_MOUSE (Q9QYX7) Piccolo protein (Presynaptic cytomatrix protein)
(Aczonin) (Brain-derived HLMN protein)
Length = 5038
Score = 34.3 bits (77), Expect = 1.7
Identities = 28/115 (24%), Positives = 52/115 (44%), Gaps = 16/115 (13%)
Query: 642 AFPETTLMSPPPRKVPT----KGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPS 697
A P PPP+K PT KG KK+ ++ K + +IP + + P + +
Sbjct: 1042 ASPVPAPAEPPPQKTPTAAHAKGKKKETEV-----KAETEKQIP------EKETPSIEKT 1090
Query: 698 PSPTTSSYKRKKGARLGKTSLSPLPPPTRYPKPKAIPVMRPIDYMPRFMVPFIEK 752
P P ++ ++ + + + K+ +S LP + KA+P + P P +E+
Sbjct: 1091 P-PAVATDQKLEESEVTKSLVSVLPEKKPSEEEKALPADKKEKKPPAAEAPPLEE 1144
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,195,637
Number of Sequences: 164201
Number of extensions: 5459627
Number of successful extensions: 15401
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 15083
Number of HSP's gapped (non-prelim): 216
length of query: 985
length of database: 59,974,054
effective HSP length: 120
effective length of query: 865
effective length of database: 40,269,934
effective search space: 34833492910
effective search space used: 34833492910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)
Medicago: description of AC140549.7