BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140546.3 + phase: 0
(266 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IF3_SYNPX (Q7UA08) Translation initiation factor IF-3 134 2e-31
IF3_PROMA (Q7V9N2) Translation initiation factor IF-3 133 5e-31
IF3_PROMM (Q7TV76) Translation initiation factor IF-3 131 2e-30
IF3_ANASP (Q8YNE3) Translation initiation factor IF-3 131 2e-30
IF3_SYNY3 (P72874) Translation initiation factor IF-3 128 1e-29
IF3_SYNEL (Q8DIG8) Translation initiation factor IF-3 127 4e-29
IF3_THETN (Q8R9C2) Translation initiation factor IF-3 126 6e-29
IF3C_EUGGR (P36177) Translation initiation factor IF-3, chloropl... 126 6e-29
IF3C_GALSU (Q9MS97) Translation initiation factor IF-3, chloroplast 125 8e-29
IF3_AQUAE (O67653) Translation initiation factor IF-3 125 1e-28
IF3_PASMU (Q9CN42) Translation initiation factor IF-3 122 7e-28
IF3_PROMP (Q7TU24) Translation initiation factor IF-3 122 1e-27
IF3_GLOVI (Q7NJS6) Translation initiation factor IF-3 120 3e-27
IF3_COXBU (Q83C11) Translation initiation factor IF-3 120 3e-27
IF3C_PORPU (P51231) Translation initiation factor IF-3, chloroplast 120 3e-27
IF3_HAEIN (P43814) Translation initiation factor IF-3 119 6e-27
IF3C_CYAME (Q85G77) Translation initiation factor IF-3, chloroplast 119 6e-27
IF3_AZOVI (Q8RQ01) Translation initiation factor IF-3 119 1e-26
IF3_STAEP (Q8CS75) Translation initiation factor IF-3 118 2e-26
IF3_THEMA (Q9X1S6) Translation initiation factor IF-3 116 6e-26
>IF3_SYNPX (Q7UA08) Translation initiation factor IF-3
Length = 217
Score = 134 bits (338), Expect = 2e-31
Identities = 74/177 (41%), Positives = 114/177 (63%), Gaps = 6/177 (3%)
Query: 83 LSSNTVRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQ 142
+S +R++D + +GV+S ++A+ +A++ ELDLV+VS +ADPPV RIM+Y K+++E +
Sbjct: 23 ISYPQLRVVDSDGSQLGVISREEALEVAKERELDLVLVSEKADPPVCRIMDYGKFKFEQE 82
Query: 143 KKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKE 202
KK ++ +KKS + ++KE+KM Y IDQHDY VR+ A +FL GDKVK V +GRE +
Sbjct: 83 KKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAVRFLKAGDKVKCTVIFRGREIQ 140
Query: 203 FRNNAIELIRRFQNDV-GKLATEEAKNFRDKNIFITLIPNKTEVQKPQE---TPTKA 255
A L+RR D+ K ++A +N+ + L P KT + K +E PTKA
Sbjct: 141 HTALAETLLRRMAKDLEEKAEIQQAPKREGRNMIMFLTPRKTPLVKKEEKEAAPTKA 197
>IF3_PROMA (Q7V9N2) Translation initiation factor IF-3
Length = 201
Score = 133 bits (334), Expect = 5e-31
Identities = 69/170 (40%), Positives = 111/170 (64%), Gaps = 3/170 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +G++S ++A+ +A+D ELDLV+VS +ADPPV RIMNY K+++E +KK ++
Sbjct: 28 LRVVDADGTQLGIISREEALDVAQDRELDLVLVSEKADPPVCRIMNYGKFKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID+HDY VR+ A +FL GDKVK V +GRE + N A
Sbjct: 88 AKKKS--HQTEVKEVKMRYKIDEHDYQVRIGQATRFLKAGDKVKCTVIFRGREIQHTNLA 145
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNKTEVQKPQETPTKAA 256
L+ R D+ + A ++A +N+ + L P KT + K ++ +A+
Sbjct: 146 ESLLARMAKDLEEPAEVQQAPKREGRNMIMFLTPRKTPLIKKEQELEEAS 195
>IF3_PROMM (Q7TV76) Translation initiation factor IF-3
Length = 219
Score = 131 bits (329), Expect = 2e-30
Identities = 71/172 (41%), Positives = 112/172 (64%), Gaps = 6/172 (3%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +GV++ ++A+ +A+D ELDLV+VS +ADPPV RIM+Y K+++E +KK ++
Sbjct: 28 LRVVDADGTQLGVINREEALDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y IDQHDY+VR+ A +FL GDKVK V +GRE + A
Sbjct: 88 AKKKS--HQTEVKEVKMRYKIDQHDYNVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALA 145
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNKT---EVQKPQETPTKA 255
L+RR D+ + A ++A +N+ + L P KT + K + PT+A
Sbjct: 146 ETLLRRMAKDLEEQAEIQQAPKREGRNMIMFLTPRKTPLIKTDKENQIPTRA 197
>IF3_ANASP (Q8YNE3) Translation initiation factor IF-3
Length = 177
Score = 131 bits (329), Expect = 2e-30
Identities = 64/156 (41%), Positives = 106/156 (67%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R+ID + +G+++ +A+++AE+ ELDLV++S +ADPPV RIM+Y KY++E +KK R+
Sbjct: 24 IRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKARE 83
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK + D+KE+KM Y I++HDY+VR+K A +FL DGDKVK V +GRE + + A
Sbjct: 84 ARKKQHTA--DVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLA 141
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNK 242
+L++R D+ ++A +N+ + + P K
Sbjct: 142 EDLLKRMATDLEPFGEVQQAPKKEGRNMMMLISPKK 177
>IF3_SYNY3 (P72874) Translation initiation factor IF-3
Length = 177
Score = 128 bits (322), Expect = 1e-29
Identities = 66/156 (42%), Positives = 102/156 (65%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R+ID +G+++ ++A+ +A++ LDLV+VS ADPPV RIM+Y KY++E +KK R+
Sbjct: 23 IRVIDSDGAQLGIITPNEAMEIADERGLDLVLVSETADPPVCRIMDYGKYKFEQEKKARE 82
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK + D+KE+KM Y ID+HDY VR+ A++FL GDKVK VN +GRE + + A
Sbjct: 83 AKKKQHTA--DVKEVKMRYKIDEHDYQVRINQAKRFLKAGDKVKATVNFRGREIQHAHLA 140
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNK 242
EL+ R D+ A ++A +N+ + L P K
Sbjct: 141 KELLDRMATDLATEADIQQAPKREGRNMMMFLSPKK 176
>IF3_SYNEL (Q8DIG8) Translation initiation factor IF-3
Length = 182
Score = 127 bits (318), Expect = 4e-29
Identities = 65/156 (41%), Positives = 103/156 (65%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
VR++D + +G++S +AI +A + ELDLV+VS +ADPPV +I++Y K+R+E +KK R+
Sbjct: 29 VRVVDTDGSQLGIMSSQEAIAIAREKELDLVLVSDKADPPVCKIIDYGKFRFEQEKKARE 88
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK S D+KE+KM Y I++HDY+V + A +FL GDKVK V +GRE + + A
Sbjct: 89 ARKKQHTS--DVKEVKMRYKIEEHDYNVCINRAERFLKAGDKVKATVTFRGREIQHSHLA 146
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNK 242
EL+ R ND+ +A ++A +N+ + L P +
Sbjct: 147 EELLNRMANDLQAVAEVQQAPKQEGRNMIMFLAPKR 182
>IF3_THETN (Q8R9C2) Translation initiation factor IF-3
Length = 180
Score = 126 bits (316), Expect = 6e-29
Identities = 61/156 (39%), Positives = 104/156 (66%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
VRLIDQ +G++S +A ++A++ LDLV + A+PPV ++M++ KYRYEL K++++
Sbjct: 26 VRLIDQDGKQIGIMSAKEAYKIAQERHLDLVKIVPNANPPVCKLMDFGKYRYELSKREKE 85
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK +++KE++M NI+ HD+ V+LK+A KFL DGDKVKV + +GRE + A
Sbjct: 86 AKKKQKI--INVKEIRMSPNIEDHDFGVKLKSAIKFLKDGDKVKVTIRFRGREAAHTSLA 143
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNK 242
+L++RF ++ + E+A + +N+ + + P K
Sbjct: 144 EDLLKRFAEELREYGNVEKAPSMDGRNMMMVIAPKK 179
>IF3C_EUGGR (P36177) Translation initiation factor IF-3, chloroplast
precursor (IF-3chl)
Length = 538
Score = 126 bits (316), Expect = 6e-29
Identities = 85/256 (33%), Positives = 136/256 (52%), Gaps = 31/256 (12%)
Query: 32 LQSSPSFTLPSHATVRYGVNL-RPSAYGGG-GNFRRAPPEKDADDGQAL----------- 78
L+ SPS TL S+ + G+ L + +G G G R P E++ ++ Q +
Sbjct: 242 LRGSPSSTL-SNLGMGLGLGLGKGKGFGKGFGKGRGFPVEEEVEEEQEVLSWADRRRALA 300
Query: 79 ---------DLSTLSSNTVRLIDQSQN-MVGVVSLDQAIRMAEDAELDLVIVSAEADPPV 128
D+ VR + ++ +GV+S +A+ +AE ++DLV+VS + DPPV
Sbjct: 301 DPDAPPMNEDIKYPQLRLVRAVPGGRDEKLGVMSRQEALELAEAEDIDLVLVSIDTDPPV 360
Query: 129 VRIMNYSKYRYELQKKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGD 188
+++NYSK +YE +KKK+D KK ++KELK+ + I QHDY VR+K ARKFL G
Sbjct: 361 AKLVNYSKLKYESEKKKKDSHKKGKVK--EVKELKVSHKIGQHDYDVRVKQARKFLEGGH 418
Query: 189 KVKVIVNLKGREKEFRNNAIELIRRFQNDVGKLATEEAKNFR-DKNIFITLIPN----KT 243
++KV + KGRE +F +++RFQND+ + +A + + + L P K
Sbjct: 419 RIKVSMEFKGRENQFVEIGRAVMKRFQNDLADMGKADAVPKKLGTRLILNLAPAGEALKV 478
Query: 244 EVQKPQETPTKAATDE 259
++ E KAA +E
Sbjct: 479 IAERRAERDRKAAAEE 494
>IF3C_GALSU (Q9MS97) Translation initiation factor IF-3, chloroplast
Length = 181
Score = 125 bits (315), Expect = 8e-29
Identities = 63/162 (38%), Positives = 108/162 (65%), Gaps = 3/162 (1%)
Query: 83 LSSNTVRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQ 142
+S VR+ID++ +G+ ++ A+++AE+ LDLV+++ + +PPVVRI++Y K+++ +
Sbjct: 22 ISFPIVRIIDENNYQLGIYKIEDALKLAEEKNLDLVLINDKTEPPVVRIIDYGKFKFAQE 81
Query: 143 KKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKE 202
KK R+ +KK ++ +KE+KM Y I+ HDY VR+ A KFL G+KVK+ + KGRE +
Sbjct: 82 KKSREAKKKQ--HQVTVKEIKMRYKIEDHDYQVRINQAIKFLKLGNKVKISLTFKGREIQ 139
Query: 203 FRNNAIELIRRFQNDVGKLAT-EEAKNFRDKNIFITLIPNKT 243
+ + A +LI + + + LA E+ + KNI+I L+P KT
Sbjct: 140 YIDLAEKLIEKIIHSLSSLAEHEKVFDKEGKNIYIMLLPKKT 181
>IF3_AQUAE (O67653) Translation initiation factor IF-3
Length = 175
Score = 125 bits (313), Expect = 1e-28
Identities = 58/154 (37%), Positives = 103/154 (66%)
Query: 89 RLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRDQ 148
RLID++ +G+V +++A+++AE+ LDLV ++ +A PPV +IM+Y K++YEL+KK+R+
Sbjct: 19 RLIDENGQQIGIVPIEEALKIAEEKGLDLVEIAPQAKPPVCKIMDYGKFKYELKKKEREA 78
Query: 149 QKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNAI 208
+KK ++++K+++M ID+HD V+LK R+FL +GDKVKV + +GRE +
Sbjct: 79 RKKQREHQIEVKDIRMKVRIDEHDLQVKLKHMREFLEEGDKVKVWLRFRGRENIYPELGK 138
Query: 209 ELIRRFQNDVGKLATEEAKNFRDKNIFITLIPNK 242
+L R N++ +A E + ++ N I ++ K
Sbjct: 139 KLAERIINELSDIAEVEVQPKKEGNFMIFVLAPK 172
>IF3_PASMU (Q9CN42) Translation initiation factor IF-3
Length = 180
Score = 122 bits (307), Expect = 7e-28
Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 4/157 (2%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
VRLIDQ G+VS+ QA+ MAE AELDLV +S A+PPV RIMNY K+ YE K ++
Sbjct: 25 VRLIDQDGEQAGIVSIQQALEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKE 84
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
Q+KK + +KE+K D+ DY V+L++ +FL +GDK K+ V +GRE ++
Sbjct: 85 QKKKQKV--VQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITVRFRGREMAHQDIG 142
Query: 208 IELIRRFQNDVGKLATEEAK--NFRDKNIFITLIPNK 242
+E++ R +ND+ +++ E+ + + L P K
Sbjct: 143 LEVLERVKNDLAEISVVESAPGRLEGRQAVMVLAPKK 179
>IF3_PROMP (Q7TU24) Translation initiation factor IF-3
Length = 190
Score = 122 bits (305), Expect = 1e-27
Identities = 65/164 (39%), Positives = 105/164 (63%), Gaps = 3/164 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +GV+ +A+ +A LDLV+VS +A+PPV RIM+Y KY++E +KK ++
Sbjct: 28 LRVVDSDGKQLGVIDRIKALEIAHQRGLDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID+HDY VR+ A +FL GDKVK V +GRE + N A
Sbjct: 88 TKKKS--HQTEVKEVKMRYKIDKHDYDVRIGQAVRFLKSGDKVKCTVFFRGREIQHSNLA 145
Query: 208 IELIRRFQNDVGKLATEEAKNFRD-KNIFITLIPNKTEVQKPQE 250
L+ + ND+ + + + + R+ +N+ + L P KT + K +E
Sbjct: 146 ETLLLKMANDLEEQSEVQQRPKREGRNMIMFLSPRKTPLIKKEE 189
>IF3_GLOVI (Q7NJS6) Translation initiation factor IF-3
Length = 199
Score = 120 bits (302), Expect = 3e-27
Identities = 66/180 (36%), Positives = 109/180 (59%), Gaps = 8/180 (4%)
Query: 69 EKDADDGQALDLSTLSSNT----VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEA 124
+K +D GQA +L ++ +R ID +G++ A+R+AE+ LDLV+VS +A
Sbjct: 23 KKRSDRGQA-NLPMINERIRFPKIRAIDADGTQLGIMHPRDALRIAEERNLDLVVVSEDA 81
Query: 125 DPPVVRIMNYSKYRYELQKKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFL 184
PPV RIM+Y KY++E +K+ ++ +KK + D+KE+KM Y I +HDY VRL+ +FL
Sbjct: 82 QPPVCRIMDYGKYKFEQEKRAKEARKKQHTA--DVKEVKMRYTIGEHDYQVRLRDTIRFL 139
Query: 185 SDGDKVKVIVNLKGREKEFRNNAIELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNKT 243
DGDKVK + +GRE + N A +L+ + D ++ ++ + +N+ + L P +T
Sbjct: 140 KDGDKVKATIMFRGREIQHANLAKDLLMQLAADSAEIGEVQQEPSVEGRNMIMILSPKRT 199
>IF3_COXBU (Q83C11) Translation initiation factor IF-3
Length = 185
Score = 120 bits (301), Expect = 3e-27
Identities = 66/160 (41%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
VRLID+ VGVV D+A+ MAE+A LDLV +S A PPV RIMN+ KY++E K+K
Sbjct: 17 VRLIDEKGEQVGVVRTDRALTMAEEAGLDLVEISPTAKPPVCRIMNFGKYQFEQSKRKAA 76
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
Q+KK + LKE+K D DY V+L+ FL GDKVKV + +GRE + R
Sbjct: 77 QKKKQRL--VHLKEVKFRPGTDVGDYQVKLRKIATFLDRGDKVKVSLRFRGREMQHRELG 134
Query: 208 IELIRRFQNDVGKLATEEAKNFRDKNIFITLIPNKTEVQK 247
+EL+ R + D+G + E+ + + + ++ K E K
Sbjct: 135 LELLGRVKRDLGNIVVEQEPRLEGRQMTMVVMKAKGEGNK 174
>IF3C_PORPU (P51231) Translation initiation factor IF-3, chloroplast
Length = 182
Score = 120 bits (301), Expect = 3e-27
Identities = 63/156 (40%), Positives = 97/156 (61%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
VR+ID +G+ + + AI++A LDLV+VS ++DPPV RI++Y KY++ +K+ R+
Sbjct: 27 VRVIDDEGEQLGIFAPEAAIQLATKQGLDLVLVSDKSDPPVCRILDYGKYKFTQEKRARE 86
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK S +KE+KM Y I++HDY VR+ A KFL GDKVK + +GRE + N A
Sbjct: 87 AKKKQHNS--SIKEVKMRYKIEEHDYKVRINQASKFLQSGDKVKATITFRGREIQHSNLA 144
Query: 208 IELIRRFQNDVGKLATEEAKNFRD-KNIFITLIPNK 242
I L+ + D+ +A + RD +N+ + L P K
Sbjct: 145 INLLNKMAADLVTIAEIQQAPSRDGRNVIMLLSPKK 180
>IF3_HAEIN (P43814) Translation initiation factor IF-3
Length = 172
Score = 119 bits (299), Expect = 6e-27
Identities = 63/158 (39%), Positives = 97/158 (60%), Gaps = 5/158 (3%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRM-AEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKR 146
VRLIDQ+ G+VS+ QA+ M AE AELDLV +S A+PPV RIMNY K+ YE K +
Sbjct: 16 VRLIDQNGEQAGIVSIQQALEMMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAK 75
Query: 147 DQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNN 206
+Q+KK + +KE+K D+ DY V+L++ +FL DGDK K+ V +GRE ++
Sbjct: 76 EQKKKQKV--VQVKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDI 133
Query: 207 AIELIRRFQNDVGKLATEEAK--NFRDKNIFITLIPNK 242
++++ R +ND+ +++ E+ + + L P K
Sbjct: 134 GLDVLERVKNDLAEISVVESAPGKLEGRQAVMVLAPKK 171
>IF3C_CYAME (Q85G77) Translation initiation factor IF-3, chloroplast
Length = 175
Score = 119 bits (299), Expect = 6e-27
Identities = 63/158 (39%), Positives = 100/158 (62%), Gaps = 5/158 (3%)
Query: 87 TVRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKR 146
++ +ID+S N +GV + +Q ++A LDL++++ ADPPV +I+NY KY++EL+KK +
Sbjct: 22 SILVIDESGNPLGVFTSEQGRQLAAKKGLDLLLINPNADPPVCKIVNYGKYKFELEKKAK 81
Query: 147 DQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNN 206
++K + LKE++M YN+++HDY VRL A KFL GDKVKV + LKGRE +
Sbjct: 82 AKRKNQS----QLKEIQMSYNMEEHDYQVRLSQACKFLKAGDKVKVTLMLKGREMQHLEL 137
Query: 207 AIELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNKT 243
A + +FQ DV LA + + +N+ +P K+
Sbjct: 138 AQNKMAQFQADVSSLAQLAKPPSQEGRNLSAIFVPKKS 175
>IF3_AZOVI (Q8RQ01) Translation initiation factor IF-3
Length = 181
Score = 119 bits (297), Expect = 1e-26
Identities = 61/161 (37%), Positives = 101/161 (61%), Gaps = 3/161 (1%)
Query: 83 LSSNTVRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQ 142
+S+ VRLI +G+VS+D+A+R+AE+A+LDLV +SA+A PPV RIM+Y K+ +E
Sbjct: 21 ISAREVRLIGVDGEQIGIVSIDEALRVAEEAKLDLVEISADAVPPVCRIMDYGKHLFE-- 78
Query: 143 KKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKE 202
KKK+ K ++ +KE+K ++ DY V+L+ +FL+DGDK KV + +GRE
Sbjct: 79 KKKQVAAAKKNQKQVQIKEIKFRPGTEEGDYQVKLRNLVRFLNDGDKAKVSLRFRGREMA 138
Query: 203 FRNNAIELIRRFQNDVGKLAT-EEAKNFRDKNIFITLIPNK 242
+ +EL++R +ND+ + T E+ + + + + P K
Sbjct: 139 HQELGMELLKRVENDLAEFGTVEQYPKLEGRQLMMVIAPKK 179
>IF3_STAEP (Q8CS75) Translation initiation factor IF-3
Length = 175
Score = 118 bits (295), Expect = 2e-26
Identities = 61/159 (38%), Positives = 97/159 (60%), Gaps = 3/159 (1%)
Query: 83 LSSNTVRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQ 142
+ + +RLI Q +GV S +A+ MAE +LDLV+V+ A PPV RIM+Y KY++E Q
Sbjct: 15 IRAKELRLIGQDGEQIGVKSKREALEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQ 74
Query: 143 KKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKE 202
KK+++ +KK +++KEL++ I++HD+ +LK RKFLS GDK KV + +GR
Sbjct: 75 KKEKEMKKKQKV--INVKELRLSPTIEEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAIT 132
Query: 203 FRNNAIELIRRFQNDVGKLATEEAK-NFRDKNIFITLIP 240
+ ++ +F ++ +AT E K + +FI L P
Sbjct: 133 HKEIGQRVLEKFADECKDIATVEQKPKMEGRQMFIMLAP 171
>IF3_THEMA (Q9X1S6) Translation initiation factor IF-3
Length = 172
Score = 116 bits (290), Expect = 6e-26
Identities = 58/157 (36%), Positives = 96/157 (60%), Gaps = 5/157 (3%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
VR++D++ M+GV+ +A+ +A + LDLV+V+ +PPV RIM+Y KY+Y+L KK+++
Sbjct: 20 VRVVDENGKMIGVMPTRKALELAREKGLDLVLVAPNENPPVARIMDYGKYKYQLTKKQKE 79
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK + +K++K ID+HDY ++K R+FL DG KV+V+V GRE F
Sbjct: 80 NKKKP----VQMKQMKFRLKIDEHDYQTKVKHIRRFLEDGHKVRVVVMFIGREMMFAEKG 135
Query: 208 IELIRRFQNDVGKLAT-EEAKNFRDKNIFITLIPNKT 243
E++ R D LAT E +++++ L P +
Sbjct: 136 KEILERVIKDTEDLATVESPPKMEGRDMWMVLKPKNS 172
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.313 0.130 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,250,572
Number of Sequences: 164201
Number of extensions: 1184987
Number of successful extensions: 3275
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3025
Number of HSP's gapped (non-prelim): 160
length of query: 266
length of database: 59,974,054
effective HSP length: 108
effective length of query: 158
effective length of database: 42,240,346
effective search space: 6673974668
effective search space used: 6673974668
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Medicago: description of AC140546.3