
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140025.4 + phase: 0
(277 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PTB_RAT (Q00438) Polypyrimidine tract-binding protein 1 (PTB) (H... 101 2e-21
PTB_PIG (Q29099) Polypyrimidine tract-binding protein 1 (PTB) (H... 100 7e-21
PTB_MOUSE (P17225) Polypyrimidine tract-binding protein 1 (PTB) ... 97 3e-20
PTB_HUMAN (P26599) Polypyrimidine tract-binding protein 1 (PTB) ... 97 3e-20
ROD1_RAT (Q9Z118) Regulator of differentiation 1 (Rod1) 94 5e-19
ROD1_MOUSE (Q8BHD7) Regulator of differentiation 1 (Rod1) 94 5e-19
ROD1_HUMAN (O95758) Regulator of differentiation 1 (Rod1) 92 1e-18
ROL_MOUSE (Q8R081) Heterogeneous nuclear ribonucleoprotein L (hn... 79 1e-14
ROL_HUMAN (P14866) Heterogeneous nuclear ribonucleoprotein L (hn... 79 1e-14
IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2 60 4e-09
LEG3_CANFA (P38486) Galectin-3 (Galactose-specific lectin 3) (Ma... 52 2e-06
CBPA_DICDI (P35085) Calcium-binding protein 51 3e-06
ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt... 48 3e-05
RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subun... 47 5e-05
RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subun... 47 7e-05
CM32_HUMAN (Q8NDC0) Protein c14orf32 47 7e-05
CA11_RAT (P02454) Collagen alpha 1(I) chain (Fragments) 47 7e-05
ANX7_XENLA (Q92125) Annexin A7 (Annexin VII) (Synexin) 46 9e-05
LEG3_CRILO (P47953) Galectin-3 (Galactose-specific lectin 3) (Ma... 45 1e-04
S24A_ARATH (Q9SFU0) Putative protein transport protein Sec24-lik... 45 3e-04
>PTB_RAT (Q00438) Polypyrimidine tract-binding protein 1 (PTB)
(Heterogeneous nuclear ribonucleoprotein I) (hnRNP I)
(Pyrimidine-binding protein) (PYBP)
Length = 555
Score = 101 bits (251), Expect = 2e-21
Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 23/225 (10%)
Query: 12 AAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQA 71
AA A G + +S VL +EN+ Y VT+DV++ +FS FGTV KI F KN Q QA
Sbjct: 164 AASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQA 223
Query: 72 LIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAP 131
L+QY D +A A+ +L+G IY+ C L + +S+ T LNVK +DKSRDYT P +P+
Sbjct: 224 LLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS- 281
Query: 132 VWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVP-GGQVPSWDLTQHAVRPGYVPVPGAY 190
+ T + A+ G+P + P G VPS H P + +
Sbjct: 282 ---GDSQPSLDQTMAAAF------GAPGIMSASPYAGAVPS-----HLCHPSRAGL--SV 325
Query: 191 PGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNV----NLQP 231
P GA + +AA A+ +A GA ++V NL P
Sbjct: 326 PNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNP 370
Score = 30.4 bits (67), Expect = 4.9
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 35 IENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIY 94
+ N+ +V+ D + ++FS+ G V K F + + ALIQ V A A L H +
Sbjct: 482 LSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLG 541
Query: 95 DGGYCKLHLSYSRHT 109
+ + L +S+S+ T
Sbjct: 542 ENHH--LRVSFSKST 554
>PTB_PIG (Q29099) Polypyrimidine tract-binding protein 1 (PTB)
(Heterogeneous nuclear ribonucleoprotein I) (hnRNP I)
Length = 557
Score = 99.8 bits (247), Expect = 7e-21
Identities = 79/227 (34%), Positives = 114/227 (49%), Gaps = 26/227 (11%)
Query: 12 AAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQA 71
AA A G + +S VL +EN+ Y VT+DV++ +FS FGTV KI F KN Q QA
Sbjct: 165 AASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQA 224
Query: 72 LIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAP 131
L+QY D +A A+ +L+G IY+ C L + +S+ T LNVK +DKSRDYT P +P+
Sbjct: 225 LLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS- 282
Query: 132 VWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVP---GGQVPSWDLTQHAVRPGYVPVPG 188
+ T + A+ G+P + P G P++ + Q A V VP
Sbjct: 283 ---GDNQPSLDQTMAAAF------GAPGIMSASPYAGAGFPPTFAIPQAAT----VSVPN 329
Query: 189 AYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNV----NLQP 231
+ GA + +AA A+ +A GA ++V NL P
Sbjct: 330 VH----GALAPLAIPSAAARAAAAGRIAIPGLAGAGNSVLLVSNLNP 372
>PTB_MOUSE (P17225) Polypyrimidine tract-binding protein 1 (PTB)
(Heterogeneous nuclear ribonucleoprotein I) (hnRNP I)
Length = 527
Score = 97.4 bits (241), Expect = 3e-20
Identities = 55/119 (46%), Positives = 75/119 (62%), Gaps = 1/119 (0%)
Query: 12 AAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQA 71
AA A G + +S VL +EN+ Y VT+DV++ +FS FGTV KI F KN Q QA
Sbjct: 164 AASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQA 223
Query: 72 LIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPA 130
L+QY D +A A+ +L+G IY+ C L + +S+ T LNVK +DKSRDYT P +P+
Sbjct: 224 LLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS 281
Score = 30.4 bits (67), Expect = 4.9
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 35 IENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIY 94
+ N+ +V+ D + ++FS+ G V K F + + ALIQ V A A L H +
Sbjct: 454 LSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLG 513
Query: 95 DGGYCKLHLSYSRHT 109
+ + L +S+S+ T
Sbjct: 514 ENHH--LRVSFSKST 526
>PTB_HUMAN (P26599) Polypyrimidine tract-binding protein 1 (PTB)
(Heterogeneous nuclear ribonucleoprotein I) (hnRNP I)
(57 kDa RNA-binding protein PPTB-1)
Length = 531
Score = 97.4 bits (241), Expect = 3e-20
Identities = 55/119 (46%), Positives = 75/119 (62%), Gaps = 1/119 (0%)
Query: 12 AAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQA 71
AA A G + +S VL +EN+ Y VT+DV++ +FS FGTV KI F KN Q QA
Sbjct: 165 AASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQA 224
Query: 72 LIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPA 130
L+QY D +A A+ +L+G IY+ C L + +S+ T LNVK +DKSRDYT P +P+
Sbjct: 225 LLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS 282
Score = 30.8 bits (68), Expect = 3.8
Identities = 28/98 (28%), Positives = 49/98 (49%), Gaps = 5/98 (5%)
Query: 28 SNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREA 87
++VLL S N + VT + +F +G VQ++ + N + AL+Q D A A
Sbjct: 336 NSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILF-NKKENALVQMADGNQAQLAMSH 393
Query: 88 LEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDK--SRDY 123
L GH ++ G ++ LS ++ L + D+ ++DY
Sbjct: 394 LNGHKLH-GKPIRITLSKHQNVQLPREGQEDQGLTKDY 430
>ROD1_RAT (Q9Z118) Regulator of differentiation 1 (Rod1)
Length = 523
Score = 93.6 bits (231), Expect = 5e-19
Identities = 70/191 (36%), Positives = 97/191 (50%), Gaps = 23/191 (12%)
Query: 16 AIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQY 75
A +G + +S VL IEN+ Y VT++V++ +FS FGTV KI F KN Q QAL+QY
Sbjct: 138 ATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQY 197
Query: 76 PDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPA----P 131
D A A+ AL+G IY+ C L + +S+ T LNVK +DKSRD+T +P P
Sbjct: 198 ADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQP 256
Query: 132 VWQNPQAAPMYPTNSPAYQTQVPGGSPAYQ-------------TQVPGGQVPSWDLTQHA 178
+ P AA +P + G+ + + VPG P LT A
Sbjct: 257 SLEPPMAAAF---GAPGIMSSPYAGAAGFAPAIAFPQAAGLSVSAVPGALGP-LTLTSSA 312
Query: 179 VRPGYVPVPGA 189
V G + +PGA
Sbjct: 313 V-SGRMAIPGA 322
Score = 30.0 bits (66), Expect = 6.4
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 35 IENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIY 94
+ N+ +VT+D + +F+ G K F + + ALIQ V A A L H +
Sbjct: 450 LSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLG 509
Query: 95 DGGYCKLHLSYSRHT 109
+ + L +S+S+ T
Sbjct: 510 ENHH--LRVSFSKST 522
>ROD1_MOUSE (Q8BHD7) Regulator of differentiation 1 (Rod1)
Length = 523
Score = 93.6 bits (231), Expect = 5e-19
Identities = 70/190 (36%), Positives = 97/190 (50%), Gaps = 21/190 (11%)
Query: 16 AIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQY 75
A +G + +S VL IEN+ Y VT++V++ +FS FGTV KI F KN Q QAL+QY
Sbjct: 138 ATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQY 197
Query: 76 PDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPA----P 131
D A A+ AL+G IY+ C L + +S+ T LNVK +DKSRD+T +P P
Sbjct: 198 ADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQP 256
Query: 132 VWQNPQAAPMYPTNSPAYQTQVPGGSPAYQ-----TQVPGGQVPS-------WDLTQHAV 179
+ P AA +P + G+ + Q G VP+ LT AV
Sbjct: 257 SLEPPMAAAF---GAPGIMSSPYAGAAGFAPAIAFPQAAGLSVPAVPGALGPLTLTSSAV 313
Query: 180 RPGYVPVPGA 189
G + +PGA
Sbjct: 314 -SGRMAIPGA 322
Score = 30.0 bits (66), Expect = 6.4
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 35 IENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIY 94
+ N+ +VT+D + +F+ G K F + + ALIQ V A A L H +
Sbjct: 450 LSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLG 509
Query: 95 DGGYCKLHLSYSRHT 109
+ + L +S+S+ T
Sbjct: 510 ENHH--LRVSFSKST 522
>ROD1_HUMAN (O95758) Regulator of differentiation 1 (Rod1)
Length = 521
Score = 92.4 bits (228), Expect = 1e-18
Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 25/205 (12%)
Query: 20 DGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVT 79
+G + +S VL IEN+ Y VT++V++ +FS FGTV KI F KN Q QAL+QY D
Sbjct: 140 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 199
Query: 80 TAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAPVWQNPQAA 139
A A+ AL+G IY+ C L + +S+ T LNVK +DKSRD+T +P Q
Sbjct: 200 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEP 258
Query: 140 PMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYPGQTG-AFP 198
PM + A+ G+P + + +A G+ P G +P TG + P
Sbjct: 259 PM----AAAF------GAPGIIS------------SPYAGAAGFAPAIG-FPQATGLSVP 295
Query: 199 TMPSYGSAAMPTASSPLAQSSHPGA 223
+P T+S+ + + PGA
Sbjct: 296 AVPGALGPLTITSSAVTGRMAIPGA 320
Score = 30.0 bits (66), Expect = 6.4
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 35 IENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIY 94
+ N+ +VTVD + +F G K F + + ALIQ V A A L H +
Sbjct: 448 LSNIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLG 507
Query: 95 DGGYCKLHLSYSRHT 109
+ + L +S+S+ T
Sbjct: 508 ENHH--LRVSFSKST 520
>ROL_MOUSE (Q8R081) Heterogeneous nuclear ribonucleoprotein L (hnRNP
L)
Length = 555
Score = 79.0 bits (193), Expect = 1e-14
Identities = 69/221 (31%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 4 VNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMF 63
VN+S + ++P D + + ++VLL +I N Y++T DV+ T+ + G VQ+I +F
Sbjct: 137 VNYSTSQKISRPGDSDDSRSV---NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIF 193
Query: 64 EKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDY 123
KNG QA++++ V +A A+ +L G IY G C L + Y++ T LNV + DY
Sbjct: 194 RKNG-VQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDY 251
Query: 124 TVPLVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGY 183
T P + + Q P N Q + G PA GG P H GY
Sbjct: 252 TNPNL------SGQGDPGSNPNKRQRQPPLLGDHPAEY----GG--PHGGYHSHYHDEGY 299
Query: 184 VPVPGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAP 224
P P Y G+ P G P+ P Q HP P
Sbjct: 300 GPPPPHYEGRRMG---PPVGGHRRGPSRYGP--QYGHPPPP 335
>ROL_HUMAN (P14866) Heterogeneous nuclear ribonucleoprotein L (hnRNP
L) (P/OKcl.14)
Length = 558
Score = 79.0 bits (193), Expect = 1e-14
Identities = 69/221 (31%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 4 VNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMF 63
VN+S + ++P D + + ++VLL +I N Y++T DV+ T+ + G VQ+I +F
Sbjct: 140 VNYSTSQKISRPGDSDDSRSV---NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIF 196
Query: 64 EKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDY 123
KNG QA++++ V +A A+ +L G IY G C L + Y++ T LNV + DY
Sbjct: 197 RKNG-VQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDY 254
Query: 124 TVPLVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGY 183
T P + + Q P N Q + G PA GG P H GY
Sbjct: 255 TNPNL------SGQGDPGSNPNKRQRQPPLLGDHPAEY----GG--PHGGYHSHYHDEGY 302
Query: 184 VPVPGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAP 224
P P Y G+ P G P+ P Q HP P
Sbjct: 303 GPPPPHYEGRRMG---PPVGGHRRGPSRYGP--QYGHPPPP 338
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2
Length = 1033
Score = 60.5 bits (145), Expect = 4e-09
Identities = 50/157 (31%), Positives = 60/157 (37%), Gaps = 13/157 (8%)
Query: 126 PLVPAPVWQNP-QAAPMYPTNSPAYQ-TQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGY 183
P P+P P QAAP + A + + P A Q P P+ PG
Sbjct: 73 PSAPSPAQAGPSQAAPAAGDRAAAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPT-PGP 131
Query: 184 VPVPGAYPG--QTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGS 241
P P P + A P P+ S P S P + PGAP +P G SGPG
Sbjct: 132 KPAPRPAPAAPEFTAPPAAPAAPSTPAPAPSGPKPGGARPGAP-----KPGGARPSGPGQ 186
Query: 242 SPHMQQNLGAQGMVRPGAP---PNVRPGGASPSGQHY 275
Q G G RPGAP P RPGG P +
Sbjct: 187 DRGQQGGQGRPGGQRPGAPAQRPGGRPGGPRPGNNPF 223
Score = 48.5 bits (114), Expect = 2e-05
Identities = 50/154 (32%), Positives = 59/154 (37%), Gaps = 9/154 (5%)
Query: 126 PLVPAPVWQNPQAAPMYP-TNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYV 184
P AP + P AAP P T +PA PGG+ + PGG PS + G
Sbjct: 137 PAPAAPEFTAPPAAPAAPSTPAPAPSGPKPGGARPGAPK-PGGARPSGPGQDRGQQGGQG 195
Query: 185 PVPGAYPG----QTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPG 240
G PG + G P P G+ P S A + P AP GG PG
Sbjct: 196 RPGGQRPGAPAQRPGGRPGGPRPGNN--PFTSGGNAGMARPSAPRPQGGPRPGGPGGAPG 253
Query: 241 SSPHMQQNLGAQGMVRPGAPPNVRPG-GASPSGQ 273
P Q G G RP AP RP G+ P Q
Sbjct: 254 GGPRPQGPGGQGGGPRPQAPGGNRPSPGSMPRPQ 287
>LEG3_CANFA (P38486) Galectin-3 (Galactose-specific lectin 3) (Mac-2
antigen) (IgE-binding protein) (35 kDa lectin)
(Carbohydrate binding protein 35) (CBP 35)
(Laminin-binding protein) (Lectin L-29)
Length = 295
Score = 52.0 bits (123), Expect = 2e-06
Identities = 54/161 (33%), Positives = 60/161 (36%), Gaps = 28/161 (17%)
Query: 129 PAPVWQNPQAAPMYPTNS--PAYQTQVP-GGSPA------YQTQVPGGQVPSWDLTQHAV 179
P P P A YP S AY Q P GG P Y Q P G P
Sbjct: 22 PGPWGNQPAGAGGYPGASYPGAYPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQ--APPGG 79
Query: 180 RPGYVPVPGAYPGQT--GAFPTMPSYGSAAMPTASS---PLAQSSHPGAPHNVNLQPSGG 234
PG P PG YPGQ G +P G+ PTA + P A + PG P P G
Sbjct: 80 YPGQAP-PGGYPGQAPPGGYPGQAPPGTYPGPTAPAYPGPTAPGTQPGQPSGPGAYPPPG 138
Query: 235 STSGPGSSPHMQQNLGAQGMVRPGAPPNV-----RPGGASP 270
S PG+ P G G+ P P V PGG P
Sbjct: 139 QPSAPGAYP----AAGPFGI--PAGPLTVPYDLPLPGGVKP 173
>CBPA_DICDI (P35085) Calcium-binding protein
Length = 467
Score = 51.2 bits (121), Expect = 3e-06
Identities = 48/167 (28%), Positives = 54/167 (31%), Gaps = 27/167 (16%)
Query: 134 QNPQAAPMYPTNSPA---YQTQVPG----------GSPAYQTQVPG--GQVPSWD----- 173
Q P A YP P Y Q PG G P Y Q PG GQ P
Sbjct: 87 QQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQGQPGQ 146
Query: 174 -LTQHAVRPGYVP------VPGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHN 226
Q +PG P P PGQ GA+P A P + GAP
Sbjct: 147 YPPQQPGQPGQYPPQQQGQYPPQQPGQPGAYPPQQPGQPGAYPPQQGVQNTLAKTGAPGQ 206
Query: 227 VNLQPSGGSTSGPGSSPHMQQNLGAQGMVRPGAPPNVRPGGASPSGQ 273
+ P G+ G P Q Q PP +PG P GQ
Sbjct: 207 PGVPPPQGAYPGQPGVPPQQGAYPGQQPPMGAYPPQGQPGAYPPQGQ 253
Score = 50.1 bits (118), Expect = 6e-06
Identities = 50/154 (32%), Positives = 58/154 (37%), Gaps = 24/154 (15%)
Query: 134 QNPQAAPMYPTNSPA-YQTQVPGGSPAYQTQVPG--GQVPSWDLTQHAV-------RPGY 183
Q P YP Y Q PG AY Q PG G P Q+ + +PG
Sbjct: 150 QQPGQPGQYPPQQQGQYPPQQPGQPGAYPPQQPGQPGAYPPQQGVQNTLAKTGAPGQPGV 209
Query: 184 VPVPGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSP 243
P GAYPGQ G P +Y P + P PGA P G PG+ P
Sbjct: 210 PPPQGAYPGQPGVPPQQGAYPGQQPPMGAYP--PQGQPGA-----YPPQG----QPGAYP 258
Query: 244 HMQQNLGAQGMVRP-GAPPNVRPGGASPSGQHYY 276
QQ + G P GA P + GA P Q Y
Sbjct: 259 PQQQQVAYPGQQPPMGAYPPQQ--GAYPGQQGAY 290
Score = 39.7 bits (91), Expect = 0.008
Identities = 36/107 (33%), Positives = 42/107 (38%), Gaps = 18/107 (16%)
Query: 134 QNPQAAPMYPTNSP-AYQTQ-VPGGSPAYQTQV--PGGQVPSWDLT-QHAVRPG----YV 184
Q P P P AY Q PG P Q QV PG Q P Q PG Y
Sbjct: 232 QQPPMGAYPPQGQPGAYPPQGQPGAYPPQQQQVAYPGQQPPMGAYPPQQGAYPGQQGAYP 291
Query: 185 PVPGAYPGQTGAFPTMP---------SYGSAAMPTASSPLAQSSHPG 222
GAYPGQ GA+P P YG +A ++ ++PG
Sbjct: 292 GQQGAYPGQQGAYPGQPPMGAYPGQQQYGVSAYSQTTAAYQTGAYPG 338
Score = 38.9 bits (89), Expect = 0.014
Identities = 42/154 (27%), Positives = 50/154 (32%), Gaps = 21/154 (13%)
Query: 125 VPLVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYV 184
V ++ P Q+ P P Y Q PG PG +P + TQ +PG
Sbjct: 22 VKVMGTPGAPGSQSTPGAPGAPGQYPPQQPG--------APGSNLPPYPGTQ---QPGAP 70
Query: 185 PVPGAYPGQTGAFPTMPSYGSAAMPTASS--PLAQSSHPGAPHNVNLQPSGGSTSGPGSS 242
PG YP P P P A P Q PG P Q PG
Sbjct: 71 GAPGQYP------PQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQQPGQP 124
Query: 243 PHMQQNLGAQGMVRP--GAPPNVRPGGASPSGQH 274
+ Q GA G P G P P GQ+
Sbjct: 125 GYPPQQPGAPGQYPPQQGQPGQYPPQQPGQPGQY 158
Score = 38.1 bits (87), Expect = 0.024
Identities = 48/164 (29%), Positives = 58/164 (35%), Gaps = 20/164 (12%)
Query: 124 TVPLVPAPVWQNPQAAPMYP-TNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAV--- 179
+ P P Q P P P +N P Y G+P Q P Q + Q
Sbjct: 35 STPGAPGAPGQYPPQQPGAPGSNLPPYPGTQQPGAPGAPGQYPPQQPGQYPPQQPGAPGQ 94
Query: 180 ----RPGYVPVPGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHP---GAPHNVNLQPS 232
+PG P PGQ+G +P G P P A +P G P Q
Sbjct: 95 YPPQQPGQPGYPPQQPGQSGQYPPQQP-GQPGYP-PQQPGAPGQYPPQQGQPGQYPPQQP 152
Query: 233 GGSTSGPGSSPHMQQ-NLGAQGMVRPGAPPNVRPG--GASPSGQ 273
G PG P QQ Q +PGA P +PG GA P Q
Sbjct: 153 G----QPGQYPPQQQGQYPPQQPGQPGAYPPQQPGQPGAYPPQQ 192
Score = 32.7 bits (73), Expect = 0.99
Identities = 44/147 (29%), Positives = 52/147 (34%), Gaps = 38/147 (25%)
Query: 134 QNPQAAPMYPTNSPA-YQTQVPG---GSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGA 189
QNPQ P P S A + +Q+P G+P PG Q PG PG
Sbjct: 2 QNPQNPP--PAGSAADFYSQMPVKVMGTPG----APGSQST----------PGAPGAPGQ 45
Query: 190 YPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSPHMQQNL 249
YP P P + +P P + PGAP P PG P Q
Sbjct: 46 YP------PQQPGAPGSNLP----PYPGTQQPGAPG----APGQYPPQQPGQYPPQQP-- 89
Query: 250 GAQGMVRPGAP--PNVRPGGASPSGQH 274
GA G P P P P SGQ+
Sbjct: 90 GAPGQYPPQQPGQPGYPPQQPGQSGQY 116
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor
(Phytocyanin-like protein)
Length = 349
Score = 47.8 bits (112), Expect = 3e-05
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 21/140 (15%)
Query: 138 AAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYPGQTGAF 197
++P+ PT SP T PGG+ + ++ AV P P PG+ ++G+
Sbjct: 165 SSPVSPTTSPPGSTTPPGGAHSPKSS-------------SAVSPATSP-PGSMAPKSGS- 209
Query: 198 PTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSP------HMQQNLGA 251
P P+ A P ++SP++ SS P + P ST P S+P M +
Sbjct: 210 PVSPTTSPPAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAPMTSPPGSMAPKSSS 269
Query: 252 QGMVRPGAPPNVRPGGASPS 271
P P++ PGG++ S
Sbjct: 270 PVSNSPTVSPSLAPGGSTSS 289
>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6)
Length = 1840
Score = 47.0 bits (110), Expect = 5e-05
Identities = 39/113 (34%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 135 NPQAAPMYPTNSPAYQTQVPG---GSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAY- 190
+P ++P Y +SP Y PG SP Y PG S T PGY P AY
Sbjct: 1538 SPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS--PTYSPSSPGYSPTSPAYS 1595
Query: 191 PGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSP 243
P PT PSY + + SP + S P +P PS TS P SP
Sbjct: 1596 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS-PAYSP 1645
Score = 42.4 bits (98), Expect = 0.001
Identities = 41/133 (30%), Positives = 51/133 (37%), Gaps = 14/133 (10%)
Query: 139 APMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAY-PGQTGAF 197
+P Y SPAY P SP P PS+ T P Y P +Y P
Sbjct: 1633 SPSYSPTSPAYSPTSPAYSPTSPAYSPTS--PSYSPTS----PSYSPTSPSYSPTSPSYS 1686
Query: 198 PTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSPHMQQNLGAQGMVRP 257
PT PSY + A SP + P +P PS G TS P +P + +
Sbjct: 1687 PTSPSYSPTS--PAYSPTSPGYSPTSPSYSPTSPSYGPTS-PSYNPQSAKYSPSIAY--- 1740
Query: 258 GAPPNVRPGGASP 270
+P N R ASP
Sbjct: 1741 -SPSNARLSPASP 1752
Score = 41.6 bits (96), Expect = 0.002
Identities = 46/149 (30%), Positives = 56/149 (36%), Gaps = 19/149 (12%)
Query: 139 APMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHA---VRPGYVPVPGAY-PGQT 194
+P Y SPAY P SP + P PS+ T + P Y P AY P
Sbjct: 1647 SPAYSPTSPAYSPTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1704
Query: 195 GAFPTMPSYGSAAM---PTASSPLAQS-----SHPGAPHNVNLQP-SGGSTSGPGSSPHM 245
G PT PSY + PT+ S QS S +P N L P S S + P SP
Sbjct: 1705 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTS 1764
Query: 246 QQNLGAQGMVRPG----APPNVRPGGASP 270
P +P + GASP
Sbjct: 1765 PSYSPTSPSYSPSSPTYSPSSPYSSGASP 1793
Score = 41.2 bits (95), Expect = 0.003
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 139 APMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYPGQTGAF- 197
+P Y SPAY PG SP PS+ T P Y P +Y Q+ +
Sbjct: 1689 SPSYSPTSPAYSPTSPGYSPT---------SPSYSPTS----PSYGPTSPSYNPQSAKYS 1735
Query: 198 PTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGG--STSGPGSSPHMQQNLGAQGMV 255
P++ S A + +SP + +S +P + + P+ S S P SP + GA
Sbjct: 1736 PSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 1795
Query: 256 RPGAPPNVRPGGASPSGQHYY 276
P A + G SPS Y
Sbjct: 1796 SPSAGYSPTLPGYSPSSTGQY 1816
>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6)
Length = 1887
Score = 46.6 bits (109), Expect = 7e-05
Identities = 50/174 (28%), Positives = 65/174 (36%), Gaps = 17/174 (9%)
Query: 115 AFSDKSRDYTVPLVPAPVWQNPQ---AAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPS 171
A+S S +Y+ P P+ +P ++P Y SP Y P SP P PS
Sbjct: 1670 AYSPSSSNYS-PNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP--VTPS 1726
Query: 172 WDLT--QHAVRPGYVPVPGAYPGQTGA--FPTMPSYGSAAMPTASSPLAQSSHPGAPHNV 227
+ T ++ P Y P AY QTG PT P+Y + SP + PG+P
Sbjct: 1727 YSPTSPNYSASPQYSPASPAY-SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYS 1785
Query: 228 NLQPSGGSTS---GPGSSPHMQQN-LGAQGMVRPGAPPNVRPGGA--SPSGQHY 275
P TS P S H N G P P + SPS Y
Sbjct: 1786 PASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKY 1839
Score = 42.4 bits (98), Expect = 0.001
Identities = 33/111 (29%), Positives = 41/111 (36%), Gaps = 10/111 (9%)
Query: 134 QNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAY-PG 192
Q +P Y SP Y P SP+ P Q T A P Y P Y P
Sbjct: 1776 QYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPS 1835
Query: 193 QTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSP 243
T PT P+Y +P A++ P +P PS S + P SP
Sbjct: 1836 STKYSPTSPTY---------TPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1877
Score = 39.3 bits (90), Expect = 0.011
Identities = 48/172 (27%), Positives = 62/172 (35%), Gaps = 26/172 (15%)
Query: 126 PLVPAPVWQNPQAAPMYPTNSPAYQTQVPGG-SPAYQTQVP--GGQVPSWDLTQHA-VRP 181
P PA +P +P Y SP Y PGG SP Y P P + ++A P
Sbjct: 1567 PYFPA----SPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTP 1622
Query: 182 GYVPVPGAY-PGQTGAFPTMPSYGSAAMPTASSPLAQSS----HPG---APHNVNLQPSG 233
+ P Y P +G PT P Y +S A S PG +P + N P+
Sbjct: 1623 NFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNS 1682
Query: 234 GSTS--GPGSSPHMQQNLGAQGMVRPGAP------PNVRP--GGASPSGQHY 275
S S P SP P +P PN P SP+ +Y
Sbjct: 1683 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNY 1734
Score = 34.3 bits (77), Expect = 0.34
Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 136 PQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYPGQTG 195
P P N+P Y + P G + T PGG PS+ + + G P P G
Sbjct: 1504 PPMTPWANCNTPRYFS--PPGHVSAMT--PGG--PSFSPSAASDASGMSP--SWSPAHPG 1555
Query: 196 AFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSPHMQQNLGAQGMV 255
+ P+ P + AS ++ S P +P+ P G S + SSP+
Sbjct: 1556 SSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASP 1615
Query: 256 R-PGAPPNVRP--GGASPSGQHY 275
R PN P G SPS Y
Sbjct: 1616 RYASTTPNFNPQSTGYSPSSSGY 1638
>CM32_HUMAN (Q8NDC0) Protein c14orf32
Length = 245
Score = 46.6 bits (109), Expect = 7e-05
Identities = 53/166 (31%), Positives = 65/166 (38%), Gaps = 29/166 (17%)
Query: 124 TVPLVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGY 183
TVP PAP P P P P P P+ PGG P+ PG
Sbjct: 61 TVPFGPAPTGMYPSVPPTGPPPGP--PAPFPPSGPS--CPPPGGPYPA------PTVPGP 110
Query: 184 VPVPGAYPGQTGAFPTMP-SYGSAAMPTASSPL----AQSSHPGAPHNVNLQPSGG---S 235
P G YP FP +P YG+ P A+ PL + SS P AP P+
Sbjct: 111 GPT-GPYPTPNMPFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYP 169
Query: 236 TSGPGSSPHMQQNLGAQ-----GMVRPGA--PPNVRPGGASPSGQH 274
+ GP +P Q GA G V PGA PP P +P+G +
Sbjct: 170 SPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAPYP---APTGSY 212
Score = 43.9 bits (102), Expect = 4e-04
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 13/103 (12%)
Query: 126 PLVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVP 185
P P Q P YP+ P Y P +P VP G VP PG
Sbjct: 152 PWAPGMGGQYPTPNMPYPSPGP-YPAPPPPQAPGAAPPVPWGTVP----------PGAWG 200
Query: 186 VPGAYPGQTGAFPTMPSYGSAAMP--TASSPLAQSSHPGAPHN 226
P YP TG++PT Y + + P S P PG PH+
Sbjct: 201 PPAPYPAPTGSYPTPGLYPTPSNPFQVPSGPSGAPPMPGGPHS 243
>CA11_RAT (P02454) Collagen alpha 1(I) chain (Fragments)
Length = 671
Score = 46.6 bits (109), Expect = 7e-05
Identities = 41/125 (32%), Positives = 53/125 (41%), Gaps = 13/125 (10%)
Query: 152 QVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPG--AYPGQTGAFPTMPSYGSAAMP 209
Q P GSP +Q +PG P + A +PG VPG PG +GA G +
Sbjct: 472 QGPAGSPGFQG-LPGPAGPPGE----AGKPGZZGVPGDLGAPGPSGARGERGFPGERGVQ 526
Query: 210 TASSPLAQSSHPGAPHNVNLQPSGGSTSGPGS--SPHMQQNLGAQGMVRPGAPPNVRPGG 267
P + GAP N + G+ PGS +P +Q G G+ P PP PG
Sbjct: 527 GPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQ---GMSGLZGPPGPPG-SPGZ 582
Query: 268 ASPSG 272
PSG
Sbjct: 583 ZGPSG 587
Score = 35.4 bits (80), Expect = 0.15
Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 11/96 (11%)
Query: 181 PGYVPVPGA--YPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSG 238
PG PG+ +PG G G P + P G P L + G T
Sbjct: 322 PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGS 381
Query: 239 PGSSPHMQQNLGAQGMVRPGAP--PNVRPGGASPSG 272
PGS G G P P + RPG A P G
Sbjct: 382 PGSP-------GPDGKTGPPGPAGZBGRPGPAGPPG 410
Score = 30.4 bits (67), Expect = 4.9
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 187 PGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSS--PH 244
P PG+ GA M G P + ++ PG P G+ PG++ P
Sbjct: 42 PPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGQRGPPGPQGARGLPGTAGLPG 101
Query: 245 MQQNLGAQGMVRPGAPPNVRPGGASPSGQ 273
M+ + G G+ GA N P G P G+
Sbjct: 102 MKGHRGFSGL--DGAKGNTGPAG--PKGE 126
>ANX7_XENLA (Q92125) Annexin A7 (Annexin VII) (Synexin)
Length = 512
Score = 46.2 bits (108), Expect = 9e-05
Identities = 51/176 (28%), Positives = 65/176 (35%), Gaps = 46/176 (26%)
Query: 142 YPTNSPAYQTQVPGGSPAY----QTQVPGGQVP-----------SWDLTQHAVRPGY--- 183
YP+ P Y PGG P+Y Q PGGQ P S GY
Sbjct: 5 YPSGFPGYPGY-PGGDPSYPPAAQQAFPGGQFPPAAGGGAFPPASGGGNAPPPGGGYPHA 63
Query: 184 --VPVPGAYPGQTGAFPTMPSYGSAA---------------MPTASSP--LAQSSHPGAP 224
P PG YPG ++P P +G+ A +P P A + GAP
Sbjct: 64 GGYPAPGGYPGGMPSYPGAPGFGAPAGGQGYGAPPGAPAYGVPGYGGPGFNAPAGGYGAP 123
Query: 225 H--NVNLQPSGGSTS---GPGSSPHMQQNLGAQGMVRPGAPPNVRPG---GASPSG 272
+ + P+GG S PG Q + + G PG P PG G +PSG
Sbjct: 124 NAGGFGVPPAGGYGSPGGAPGYGGFSQPSSQSYGAGGPGQMPGQMPGQMPGQAPSG 179
>LEG3_CRILO (P47953) Galectin-3 (Galactose-specific lectin 3) (Mac-2
antigen) (IgE-binding protein) (35 kDa lectin)
(Carbohydrate binding protein 35) (CBP 35)
(Laminin-binding protein) (Lectin L-29) (CBP30)
Length = 244
Score = 45.4 bits (106), Expect = 1e-04
Identities = 46/129 (35%), Positives = 51/129 (38%), Gaps = 19/129 (14%)
Query: 133 WQNPQAAPMYPTNS--PAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAY 190
W N A YP S AY Q P G AY Q P G P T PG P PGAY
Sbjct: 25 WGNQPGAGGYPGASYPGAYPGQAPPG--AYPGQAPPGAYPG--PTAPGAYPG--PAPGAY 78
Query: 191 PGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSPHMQQNLG 250
PGQ GA S A P+A + GAP P +G G P M +
Sbjct: 79 PGQPGA--------SGAYPSAPGAYPAAGPYGAPTGALTVPYKLPLAG-GVMPRML--IT 127
Query: 251 AQGMVRPGA 259
G V+P A
Sbjct: 128 IMGTVKPNA 136
Score = 29.6 bits (65), Expect = 8.4
Identities = 32/93 (34%), Positives = 40/93 (42%), Gaps = 7/93 (7%)
Query: 185 PVPGAYPGQTGAFPTMPSYGSAAMPTASSPLA-QSSHPG-APHNVNLQPSG-GSTSGPGS 241
P P +PG G P Y A+ P A A ++PG AP P+ G+ GP
Sbjct: 16 PNPQGWPGAWGNQPGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGPTAPGAYPGPAP 75
Query: 242 SPHMQQNLGAQGMV--RPGAPPNVRPGGASPSG 272
+ Q GA G PGA P P GA P+G
Sbjct: 76 GAYPGQP-GASGAYPSAPGAYPAAGPYGA-PTG 106
>S24A_ARATH (Q9SFU0) Putative protein transport protein Sec24-like
At3g07100
Length = 1054
Score = 44.7 bits (104), Expect = 3e-04
Identities = 45/146 (30%), Positives = 56/146 (37%), Gaps = 25/146 (17%)
Query: 126 PLVPAPVWQNPQAAPMYPTNSPAY------------QTQVPGGSPAYQTQ--VPGGQV-- 169
P P P QNP P P + V G P T +PG
Sbjct: 114 PSPPFPTTQNPPQGPPPPQTLAGHLSPPMSLRPQQPMAPVAMGPPPQSTTSGLPGANAYP 173
Query: 170 PSWDLTQHAVRPGYV----PVPGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPH 225
P+ D A RPG+ PV +YPG G+ P+ P Y S + A +P S P P
Sbjct: 174 PATDYHMPA-RPGFQQSMPPVTPSYPGVGGSQPSFPGYPSKQVLQAPTPFQTSQGPPGPP 232
Query: 226 NVNLQPSGGSTSGPGSSPHM--QQNL 249
V+ P T G P+M QQNL
Sbjct: 233 PVSSYPP--HTGGFAQRPNMAAQQNL 256
Score = 36.6 bits (83), Expect = 0.069
Identities = 41/153 (26%), Positives = 57/153 (36%), Gaps = 25/153 (16%)
Query: 143 PTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYPGQTGAFPTMPS 202
P +P T PG + +Q+PG + P + P Y P PG P Q FP+ P
Sbjct: 63 PPPAPPVGTMRPGQPSPFVSQIPGSRPPP-PSSNSFPSPAYGP-PGGAPFQR--FPS-PP 117
Query: 203 YGSAAMPTASSPLAQS--SHPGAPHNVNLQ----------PSGGSTSG--------PGSS 242
+ + P P Q+ H P ++ Q P +TSG P +
Sbjct: 118 FPTTQNPPQGPPPPQTLAGHLSPPMSLRPQQPMAPVAMGPPPQSTTSGLPGANAYPPATD 177
Query: 243 PHMQQNLGAQGMVRPGAPPNVRPGGASPSGQHY 275
HM G Q + P P GG+ PS Y
Sbjct: 178 YHMPARPGFQQSMPPVTPSYPGVGGSQPSFPGY 210
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.312 0.130 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,485,780
Number of Sequences: 164201
Number of extensions: 1892237
Number of successful extensions: 7059
Number of sequences better than 10.0: 522
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 487
Number of HSP's that attempted gapping in prelim test: 5592
Number of HSP's gapped (non-prelim): 1386
length of query: 277
length of database: 59,974,054
effective HSP length: 109
effective length of query: 168
effective length of database: 42,076,145
effective search space: 7068792360
effective search space used: 7068792360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Medicago: description of AC140025.4