BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140025.11 + phase: 0
(217 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
P47A_CANBO (P21245) Peroxisomal membrane protein PMP47A 34 0.23
G126_HUMAN (Q86SQ4) Probable G protein-coupled receptor 126 prec... 32 0.87
CYK2_YEAST (Q05080) Cytokinesis 2 protein 32 0.87
C862_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-) 32 1.5
TIM3_CHICK (P26652) Metalloproteinase inhibitor 3 precursor (TIM... 30 3.3
RS2_PSESM (Q886P3) 30S ribosomal protein S2 30 4.3
SSK1_YEAST (Q07084) Osomolarity two-component system protein SSK1 29 9.6
LACD_LACLA (P26593) Tagatose 1,6-diphosphate aldolase (EC 4.1.2.... 29 9.6
CFAI_MOUSE (Q61129) Complement factor I precursor (EC 3.4.21.45)... 29 9.6
>P47A_CANBO (P21245) Peroxisomal membrane protein PMP47A
Length = 423
Score = 34.3 bits (77), Expect = 0.23
Identities = 32/117 (27%), Positives = 55/117 (46%), Gaps = 10/117 (8%)
Query: 53 IFIAVVIALGFLVFPYIQFVMSESFKLCGLFMDLVKEEVAVAPVIYVSLGV-SVSCAVVA 111
+F +V AL ++ P IQ+ + E K F+ +K+ + PV + LG A +
Sbjct: 203 LFTGIVPALFLVLNPIIQYTIFEQLKS---FIVKIKKR-NITPVDALLLGAFGKLIATII 258
Query: 112 TWFFIAYTSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIP 168
T+ +I SR + K + +E D++ E D V++ P G D +K+ K P
Sbjct: 259 TYPYITLRSRM----HVKSMTEISE-DVEKERTDSVQSLPEDGSDEDNLKENSAKSP 310
>G126_HUMAN (Q86SQ4) Probable G protein-coupled receptor 126
precursor
Length = 1221
Score = 32.3 bits (72), Expect = 0.87
Identities = 19/78 (24%), Positives = 36/78 (45%), Gaps = 6/78 (7%)
Query: 114 FFIAYTSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPCDHHR 173
+F++ + KC N +K + + + C+ + SLG G K+ +PCD
Sbjct: 222 YFLSISDSKCLLNNALPVKEKEDIFAESFEQLCLVWNNSLGSIGVNFKRNYETVPCD--- 278
Query: 174 ELEAELKKMAPVNGRAVL 191
+ + K+ P NG+ +L
Sbjct: 279 ---STISKVIPGNGKLLL 293
>CYK2_YEAST (Q05080) Cytokinesis 2 protein
Length = 669
Score = 32.3 bits (72), Expect = 0.87
Identities = 22/48 (45%), Positives = 28/48 (57%), Gaps = 9/48 (18%)
Query: 8 ISSVDQSSSSMANSID----LAKS-----RNRKTLNSLQIPQCERSRS 46
+ S+ S SSMANSID AKS R RK+++ LQ+P SRS
Sbjct: 445 MESMTTSVSSMANSIDDSQRFAKSWNSSNRKRKSMSHLQVPSSASSRS 492
>C862_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-)
Length = 553
Score = 31.6 bits (70), Expect = 1.5
Identities = 13/32 (40%), Positives = 18/32 (55%)
Query: 171 HHRELEAELKKMAPVNGRAVLVLRGKCGCSVG 202
H R+LE +K + P V+VL GKC +G
Sbjct: 509 HKRDLEVMMKSLVPKERNDVVVLNGKCNGGIG 540
>TIM3_CHICK (P26652) Metalloproteinase inhibitor 3 precursor
(TIMP-3) (Tissue inhibitor of metalloproteinases-3) (21
kDa protein of extracellular matrix)
Length = 212
Score = 30.4 bits (67), Expect = 3.3
Identities = 16/65 (24%), Positives = 32/65 (48%), Gaps = 1/65 (1%)
Query: 62 GFLVFPYIQFVMSE-SFKLCGLFMDLVKEEVAVAPVIYVSLGVSVSCAVVATWFFIAYTS 120
GF + P++Q++ +E S LCG+ +++ K + + +Y + C W + +
Sbjct: 73 GFQIMPHVQYIYTEASESLCGVKLEVNKYQYLITGRVYEGKVYTGLCNWYEKWDRLTLSQ 132
Query: 121 RKCSN 125
RK N
Sbjct: 133 RKGLN 137
>RS2_PSESM (Q886P3) 30S ribosomal protein S2
Length = 247
Score = 30.0 bits (66), Expect = 4.3
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 141 LETEDCVKNSPSLG--KDGGGIKKGLFKIPCDHHRELEAELKKMA-PVNG 187
+ T D K SLG KD GG+ LF I DH R E K+ PV G
Sbjct: 136 MRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIG 185
>SSK1_YEAST (Q07084) Osomolarity two-component system protein SSK1
Length = 712
Score = 28.9 bits (63), Expect = 9.6
Identities = 21/59 (35%), Positives = 28/59 (46%), Gaps = 5/59 (8%)
Query: 9 SSVDQSSSSMANSIDLAKSRNRKTLNSLQIPQCERSRSAVVDVVIFIAVVIALGFLVFP 67
SSV ++ S S DLAK R N LQ P+ + R A+ D + V A + FP
Sbjct: 107 SSVSPTAGSFGLSKDLAKDR-----NVLQHPKPTQKRGALYDAFAAVPTVAATTNVDFP 160
>LACD_LACLA (P26593) Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
(Tagatose-bisphosphate aldolase)
(D-tagatose-1,6-bisphosphate aldolase)
Length = 326
Score = 28.9 bits (63), Expect = 9.6
Identities = 25/90 (27%), Positives = 41/90 (44%), Gaps = 10/90 (11%)
Query: 17 SMANSIDLAKSRNRKTLNSLQIPQCERSRSAVVDVVIFIAVVIALGFL--VFPYIQFVMS 74
S A S++ AK + RK + ++++ R V+ V + + V GF Y + +
Sbjct: 172 SDAGSVEYAKVKPRKVIEAMKVFSDPRFNIDVLKVEVPVNVKYVEGFADGEVVYSKAEAA 231
Query: 75 ESFKLCGLFMDLVKEEVAVAPVIYVSLGVS 104
+ FK +EE P IY+S GVS
Sbjct: 232 DFFK--------AQEEATNLPYIYLSAGVS 253
>CFAI_MOUSE (Q61129) Complement factor I precursor (EC 3.4.21.45)
(C3B/C4B inactivator)
Length = 603
Score = 28.9 bits (63), Expect = 9.6
Identities = 15/54 (27%), Positives = 27/54 (49%)
Query: 129 KGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPCDHHRELEAELKKM 182
KGL +A+ + ++ETE+ +P + + IK L K+ C R K++
Sbjct: 308 KGLARSAQGEAEIETEETEMLTPGMDNERKRIKSLLPKLSCGVKRNTHTRRKRV 361
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,261,213
Number of Sequences: 164201
Number of extensions: 880046
Number of successful extensions: 1960
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1957
Number of HSP's gapped (non-prelim): 9
length of query: 217
length of database: 59,974,054
effective HSP length: 106
effective length of query: 111
effective length of database: 42,568,748
effective search space: 4725131028
effective search space used: 4725131028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Medicago: description of AC140025.11