Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140024.11 + phase: 0 
         (381 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

SLS3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor ...    77  6e-14
SRK6_BRAOL (Q09092) Putative serine/threonine-protein kinase rec...    71  4e-12
SLS2_BRAOA (P22553) S-locus-specific glycoprotein BS29-2 precursor     71  5e-12
SLS6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor (...    69  3e-11
SLS4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor ...    60  1e-08
SLS0_BRAOA (P22551) S-locus-specific glycoprotein precursor            59  2e-08
SLS1_BRAOA (P22552) S-locus-specific glycoprotein BS29-1 precursor     57  8e-08
KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precu...    36  0.14
EP1G_DAUCA (Q39688) Epidermis-specific secreted glycoprotein EP1...    35  0.41
RB_HUMAN (P06400) Retinoblastoma-associated protein (PP110) (P10...    33  1.2
YDS4_SCHPO (O14180) Hypothetical protein C4F8.04 in chromosome I       32  2.1
TRFE_CHICK (P02789) Ovotransferrin precursor (Conalbumin) (Aller...    32  3.5
R1AB_IBVK (P12723) Replicase polyprotein 1ab (pp1ab) (ORF1ab pol...    31  4.6
VP4_ROTPG (P23045) Outer capsid protein VP4 (Hemagglutinin) (Out...    30  7.8
RB_RAT (P33568) Retinoblastoma-associated protein (PP105) (RB) (...    30  7.8

>SLS3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor
           (SLSG-13) (Fragment)
          Length = 434

 Score = 77.4 bits (189), Expect = 6e-14
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)

Query: 76  YGKVVWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNN----TVATML 131
           Y   VWV + ++ +  +   L +  + ++ ++  N+    ++S+     N     VA +L
Sbjct: 79  YRTYVWVANRDNPLSNDIGTLKISGNNLVLLDHSNKS---VWSTNVTRGNERSPVVAELL 135

Query: 132 DAGNFVLQQFLPNGSMSVLWQSFDYPSDVLIPMMKLGVNRKTGHNWSLVSDKFNLEWEPK 191
           D GNFV++    N +   LWQSFDYP+D L+P MKLG + KTG N  L S  +    +P 
Sbjct: 136 DNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTS--WRSSDDPS 193

Query: 192 QGE----LNIKKSGKVYWKSGKLKS------NGL-FENIPANVQSRYQ-YIIVSNKDEDS 239
            G+    L +++  + Y  SG  +       NG     IP + +  Y  Y    N +E +
Sbjct: 194 SGDYSYKLELRRLPEFYLSSGSFRLHRSGPWNGFRISGIPEDQKLSYMVYNFTENSEEAA 253

Query: 240 FTFEVKDGKF-AQWELSSKG 258
           +TF + +  F ++  +SS G
Sbjct: 254 YTFLMTNNSFYSRLTISSTG 273


>SRK6_BRAOL (Q09092) Putative serine/threonine-protein kinase
           receptor precursor (EC 2.7.1.37) (S-receptor kinase)
           (SRK)
          Length = 849

 Score = 71.2 bits (173), Expect = 4e-12
 Identities = 79/318 (24%), Positives = 130/318 (40%), Gaps = 67/318 (21%)

Query: 80  VWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNNT--VATMLDAGNFV 137
           VWV + ++ +      L +  + ++ ++  N KP+   +  +    +  VA +L  GNFV
Sbjct: 83  VWVANRDNPLSNAIGTLKISGNNLVLLDHSN-KPVWWTNLTRGNERSPVVAELLANGNFV 141

Query: 138 LQQFLPNGSMSVLWQSFDYPSDVLIPMMKLGVNRKTGHNWSLV---------SDKFNLEW 188
           ++    N +   LWQSFDYP+D L+P MKLG N KTG N  L          S  F+ + 
Sbjct: 142 MRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKL 201

Query: 189 EPKQ-GELNIKKSGKVYWKSGKLKSNGL-FENIPANVQSRYQ-YIIVSNKDEDSFTFEVK 245
           E +   E  + +      +SG    NG+ F  IP + +  Y  Y  + N +E ++TF + 
Sbjct: 202 ETQSLPEFYLSRENFPMHRSGPW--NGIRFSGIPEDQKLSYMVYNFIENNEEVAYTFRMT 259

Query: 246 DGKF-AQWELSSKGK-----------------------------LVGDDGY--IANADMC 273
           +  F ++  L S+G                              + G   Y  +  + +C
Sbjct: 260 NNSFYSRLTLISEGYFQRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPYAYCDVNTSPVC 319

Query: 274 ---YGYNS-----------DGGCQKWEDIPTCREPGEMFQKKAGRPSIDNSTTYEFDVTY 319
               G+N             GGC +   + +C   G    KK   P    +T    D + 
Sbjct: 320 NCIQGFNPRNIQQWDQRVWAGGCIRRTQL-SCSGDGFTRMKKMKLPETTMATV---DRSI 375

Query: 320 SYSDCKIRCWKNCSCNGF 337
              +CK RC  +C+C  F
Sbjct: 376 GVKECKKRCISDCNCTAF 393


>SLS2_BRAOA (P22553) S-locus-specific glycoprotein BS29-2 precursor
          Length = 435

 Score = 70.9 bits (172), Expect = 5e-12
 Identities = 79/334 (23%), Positives = 134/334 (39%), Gaps = 75/334 (22%)

Query: 80  VWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNN----TVATMLDAGN 135
           VWV + ++ +  +   L +    ++ ++  N+    ++S+     N     VA +L  GN
Sbjct: 83  VWVANRDNPLSCSIGTLKISNMNLVLLDHSNKS---LWSTNHTRGNERSPVVAELLANGN 139

Query: 136 FVLQQFLPNGSMSVLWQSFDYPSDVLIPMMKLGVNRKTGHNWSLVSDKFNLEWEPKQGEL 195
           FVL+    N     LWQSFDYP+D L+P MKLG + +TG N  L S  +    +P  G+ 
Sbjct: 140 FVLRDSNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTS--WRSSDDPSSGDF 197

Query: 196 NIK------------KSGKVYWKSGKLKSNGLFENIPANVQSRYQ-YIIVSNKDEDSFTF 242
           + K            K   +  +SG     G F  +P + +  Y  Y    N +E ++TF
Sbjct: 198 SYKLQTRRLPEFYLFKDDFLVHRSGPWNGVG-FSGMPEDQKLSYMVYNFTQNSEEVAYTF 256

Query: 243 EVKDGK-FAQWELSSKG-----------------------------KLVGDDGY--IANA 270
            + +   +++  +SS G                             K+ G   Y  +  +
Sbjct: 257 LMTNNSIYSRLTISSSGYFERLTWTPSSGMWNVFWSSPEDFQCDVYKICGAYSYCDVNTS 316

Query: 271 DMC-------------YGYNS-DGGCQKWEDIPTCREPGEMFQKKAGRPSIDNSTTYEFD 316
            +C             +G  +  GGC++   + +C   G    KK   P    +T    D
Sbjct: 317 PVCNCIQRFDPSNVQEWGLRAWSGGCRRRTRL-SCSGDGFTRMKKMKLP---ETTMAIVD 372

Query: 317 VTYSYSDCKIRCWKNCSCNGFQL--YYSNMTGCV 348
            +    +C+ RC  +C+C  F      +  TGCV
Sbjct: 373 RSIGLKECEKRCLSDCNCTAFANADIRNGGTGCV 406


>SLS6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor
           (SLSG-6)
          Length = 436

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 26/198 (13%)

Query: 80  VWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNN----TVATMLDAGN 135
           VWV + ++ +      L +  + ++ +   N+    ++S+     N     VA +L  GN
Sbjct: 84  VWVANRDNPLSNAIGTLKISGNNLVLLGHTNKS---VWSTNLTRGNERLPVVAELLSNGN 140

Query: 136 FVLQQFLPNGSMSVLWQSFDYPSDVLIPMMKLGVNRKTGHNWSLVSDKFNLEWEPKQGEL 195
           FV++    N +   LWQSFDYP+D L+P MKLG + KTG N  L S  +    +P  G+ 
Sbjct: 141 FVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTS--WRSSDDPSSGDF 198

Query: 196 NIKKSGK-----VYW-------KSGKLKSNGL-FENIPANVQSRYQ-YIIVSNKDEDSFT 241
           + K   +       W       +SG    NG+ F  IP + +  Y  Y    N +E ++T
Sbjct: 199 SYKLETRSLPEFYLWHGIFPMHRSGPW--NGVRFSGIPEDQKLSYMVYNFTENSEEVAYT 256

Query: 242 FEVKDGK-FAQWELSSKG 258
           F + +   +++  LSS+G
Sbjct: 257 FRMTNNSIYSRLTLSSEG 274


>SLS4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor
           (SLSG-14) (Fragment)
          Length = 434

 Score = 59.7 bits (143), Expect = 1e-08
 Identities = 48/185 (25%), Positives = 88/185 (46%), Gaps = 21/185 (11%)

Query: 80  VWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNN----TVATMLDAGN 135
           VWV + ++ +  +   L +  +    ++  N+    ++S+     N     VA +L  GN
Sbjct: 81  VWVANRDNPLSSSIGTLKISGNNPCHLDHSNKS---VWSTNLTRGNERSPVVADVLANGN 137

Query: 136 FVLQQFLPNGSMSVLWQSFDYPSDVLIPMMKLGVNRKTGHNWSLVSDK---------FNL 186
           FV++    N +   LWQSFD+P+D L+P MKL  + KTG N  L S +         F+ 
Sbjct: 138 FVMRDSNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSY 197

Query: 187 EWEPKQ-GELNIKKSGKVYWKSGKLKSNGL-FENIPANVQSRYQYIIVSNKDEDSFTFEV 244
           + EP++  E  +     + ++SG    NG+ F  +P + +  Y  + +S     ++ F +
Sbjct: 198 KLEPRRLPEFYLSSGVFLLYRSGPW--NGIRFSGLPDDQKLSY-LVYISQDMRVAYKFRM 254

Query: 245 KDGKF 249
            +  F
Sbjct: 255 TNNSF 259


>SLS0_BRAOA (P22551) S-locus-specific glycoprotein precursor
          Length = 444

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 73/334 (21%)

Query: 80  VWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNNTVATMLDAGNFVLQ 139
           VWV + ++++  +   L + ++ ++ ++  N        +        A +L  GNFVL+
Sbjct: 88  VWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLR 147

Query: 140 QFLPNGSMSVLWQSFDYPSDVLIPMMKLG------VNRKTGHNWSLVSD------KFNLE 187
               N     +WQSFDYP D L+P MKLG       N K   +W   +D       F LE
Sbjct: 148 DSKTNDLDRFMWQSFDYPVDTLLPEMKLGRNLIGSENEKILTSWKSPTDPSSGDFSFILE 207

Query: 188 WEPKQGELNIKKSGKVYWKSGKLKSNGL-FENIPANVQSRYQYI---IVSNKDEDSFTFE 243
            E    E  + K+    +++G    NG+ F  IP      + YI    + N +E +++F+
Sbjct: 208 TEGFLHEFYLLKNEFKVYRTGPW--NGVRFNGIPK--MQNWSYIDNSFIDNNEEVAYSFQ 263

Query: 244 VKDGK--FAQWELSSKG--KLVGDDGYIANADMCYGYNSDG-------GCQKWEDI---P 289
           V +      ++ +SS G  +++     +   +M + +  D        G   + D+   P
Sbjct: 264 VNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWSFPEDTCDLYKVCGPYAYCDMHTSP 323

Query: 290 TCREPGEMFQKKAGR-----------------------------PSIDNSTTYEFDVTYS 320
           TC        K AGR                               +  ++    D    
Sbjct: 324 TCNCIKGFVPKNAGRWDLRDMSGGCVRSSKLSCGEGDGFLRMSQMKLPETSEAVVDKRIG 383

Query: 321 YSDCKIRCWKNCSCNGFQLYYSNM------TGCV 348
             +C+ +C ++C+C G    Y+NM      +GCV
Sbjct: 384 LKECREKCVRDCNCTG----YANMDIMNGGSGCV 413


>SLS1_BRAOA (P22552) S-locus-specific glycoprotein BS29-1 precursor
          Length = 444

 Score = 57.0 bits (136), Expect = 8e-08
 Identities = 74/334 (22%), Positives = 129/334 (38%), Gaps = 73/334 (21%)

Query: 80  VWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNNTVATMLDAGNFVLQ 139
           VWV + ++++  +   L + ++ ++ ++  N        +        A +L  GNFVL+
Sbjct: 88  VWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLR 147

Query: 140 QFLPNGSMSVLWQSFDYPSDVLIPMMKLGVNRKTGHN------WSLVSD------KFNLE 187
                     +WQSFDYP D L+P MKLG NR    N      W   +D       F LE
Sbjct: 148 DSKTTALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILE 207

Query: 188 WEPKQGELNIKKSGKVYWKSGKLKSNGL-FENIPANVQSRYQYI---IVSNKDEDSFTFE 243
            E    E  +  +    +++G    NG+ F  IP      + YI    + N  E +++F+
Sbjct: 208 TEGFLHEFYLLNNEFKVYRTGPW--NGVRFNGIPK--MQNWSYIDNSFIDNNKEVAYSFQ 263

Query: 244 VKDGK--FAQWELSSKG--KLVGDDGYIANADMCYGYNSDG-------GCQKWEDI---P 289
           V +      ++ +SS G  +++     +   +M + +  D        G   + D+   P
Sbjct: 264 VNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWSFPEDTCDLYKVCGPYAYCDMHTSP 323

Query: 290 TCREPGEMFQKKAGR-----------------------------PSIDNSTTYEFDVTYS 320
           TC        K AGR                               +  ++    D    
Sbjct: 324 TCNCIKGFVPKNAGRWDLRDMSGGCVRSSKLSCGEGDGFLRMSQMKLPETSEAVVDKRIG 383

Query: 321 YSDCKIRCWKNCSCNGFQLYYSNM------TGCV 348
             +C+ +C ++C+C G    Y+NM      +GCV
Sbjct: 384 LKECREKCVRDCNCTG----YANMDIMNGGSGCV 413


>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1
           precursor (EC 2.7.1.37)
          Length = 817

 Score = 36.2 bits (82), Expect = 0.14
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 79  VVWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNNTVATMLDAGNFVL 138
           +VW  + +  +    S L+L   G + +   +   +        T    A +LD GN V+
Sbjct: 86  IVWSANPDRPVHARRSALTLQKDGNMVLTDYDGAAVWRADGNNFTGVQRARLLDTGNLVI 145

Query: 139 QQFLPNGSMSVLWQSFDYPSDVLIP 163
           +    +   + +WQSFD P+D  +P
Sbjct: 146 E----DSGGNTVWQSFDSPTDTFLP 166


>EP1G_DAUCA (Q39688) Epidermis-specific secreted glycoprotein EP1
           precursor (52/54-kDa medium protein)
          Length = 389

 Score = 34.7 bits (78), Expect = 0.41
 Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 22/137 (16%)

Query: 123 TNNTVATMLDAGN--FVLQQFLPNGSMSV-------LWQSFDYPSDVLI--PMMKLGVNR 171
           +N  VA      N   V  + LPNG+M +       LWQSFD P+D L+    +K+G   
Sbjct: 119 SNGQVAWQTSTANKGVVGLKILPNGNMVLYDSKGKFLWQSFDTPTDTLLVGQSLKMGAVT 178

Query: 172 K------TGHNWSLVSDKFNLEWEPKQGELNIKKSGKVYWKSGKLKSNGLFENIPANVQS 225
           K       G N   V+  ++L  EPK   L  K +     K  +  S  LF  +  N   
Sbjct: 179 KLVSRASPGEN---VNGPYSLVMEPKGLHLYYKPTTSP--KPIRYYSFSLFTKLNKNESL 233

Query: 226 RYQYIIVSNKDEDSFTF 242
           +       N+++  F F
Sbjct: 234 QNVTFEFENENDQGFAF 250


>RB_HUMAN (P06400) Retinoblastoma-associated protein (PP110)
           (P105-RB) (RB)
          Length = 928

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%)

Query: 168 GVNRKTGHNWSLVSDKFNLEWEPKQGELNIKKSGKVYWKS--------GKLKSNGLFENI 219
           G NR       L +D   +E   K+ E NI +   VY+K+        G + SNGL E  
Sbjct: 256 GQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPE-- 313

Query: 220 PANVQSRYQYIIVSNKDEDSFTF 242
             N+  RY+ I + NKD D+  F
Sbjct: 314 VENLSKRYEEIYLKNKDLDARLF 336


>YDS4_SCHPO (O14180) Hypothetical protein C4F8.04 in chromosome I
          Length = 306

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 18/57 (31%), Positives = 31/57 (53%), Gaps = 2/57 (3%)

Query: 198 KKSGKVYWKSGKLKSNGLFENIPANVQSR--YQYIIVSNKDEDSFTFEVKDGKFAQW 252
           K+  K   K  + K   L ENIPA ++S+  Y   I+ +K ++    E+KD +F+ +
Sbjct: 30  KERAKEEEKDPEKKRLRLSENIPATIESKRVYDETIIEDKPDEELQAELKDDEFSAY 86


>TRFE_CHICK (P02789) Ovotransferrin precursor (Conalbumin) (Allergen
           Gal d 3) (Gal d III) (Serum transferrin)
          Length = 705

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 12/36 (33%), Positives = 22/36 (60%)

Query: 339 LYYSNMTGCVFLSWNSTQYVDMVPDKFYTLVKTTKS 374
           L + ++T C+F     T Y + + DKFYT++ + K+
Sbjct: 654 LLFKDLTKCLFKVREGTTYKEFLGDKFYTVISSLKT 689


>R1AB_IBVK (P12723) Replicase polyprotein 1ab (pp1ab) (ORF1ab
           polyprotein) [Includes: Replicase polyprotein 1a (pp1a)
           (ORF1a)] [Contains: p39; p35] (Fragment)
          Length = 521

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 134 GNFVLQQFLPNGSMSVLWQSFDYPSDVLIPMMKLGVNRKTGHNWSLV 180
           G+ VL+Q+LP G++ V     DY SD  + ++      KT H + LV
Sbjct: 298 GSTVLKQWLPEGTLLVDTDIVDYVSDAHVSVLSDCNKYKTEHKFDLV 344


>VP4_ROTPG (P23045) Outer capsid protein VP4 (Hemagglutinin) (Outer
           layer protein VP4) [Contains: Outer capsid protein VP8;
           Outer capsid protein VP5]
          Length = 775

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 35/167 (20%)

Query: 48  SKQGKFCLQFGNNSNSDFQCLFISVNAD--------YGKVVWVYD---INHSIDFNTSVL 96
           S + KF   F NN+N DFQ L   + +D        +G  VW ++    + + D++T+  
Sbjct: 134 SDKWKFFEMFRNNANIDFQ-LQRPLTSDTKLAGFLTHGGRVWTFNGETPHATTDYSTTSN 192

Query: 97  SLDYSGVLKIE------SQNRK--PIIIYSSP--QPTNNTVATMLDAGNFVLQQFLPNG- 145
             D   V+  E      SQ  K    I    P  Q T N V   L + +   Q+   N  
Sbjct: 193 LPDVEVVIHTEFYIIPRSQESKCNEYINTGLPPMQNTRNVVPVALSSRSITYQRAQVNED 252

Query: 146 ---SMSVLWQSFDYPSDVLI------PMMKLGVNRKTGHNWSLVSDK 183
              S + LW+   Y  D+ I       ++KLG     G+ WS VS K
Sbjct: 253 IIISKTSLWKEMQYNRDITIRFKFGNSIVKLG---GLGYKWSEVSFK 296


>RB_RAT (P33568) Retinoblastoma-associated protein (PP105) (RB)
           (Fragment)
          Length = 899

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 10/83 (12%)

Query: 168 GVNRKTGHNWSLVSDKFNLEWEPKQGELNIKKSGKVYWKS--------GKLKSNGLFENI 219
           G NR       L SD   +E   K+ E N+ +   VY+K+        G + SNGL E  
Sbjct: 228 GQNRSARIAKQLESDTRTIEVLCKEHECNVDEVKNVYFKNFIPFISSLGIVSSNGLPE-- 285

Query: 220 PANVQSRYQYIIVSNKDEDSFTF 242
             ++  RY+ + + +KD D+  F
Sbjct: 286 LESLSKRYEEVYLKSKDLDARLF 308


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.317    0.134    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,409,788
Number of Sequences: 164201
Number of extensions: 2233660
Number of successful extensions: 4186
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4167
Number of HSP's gapped (non-prelim): 25
length of query: 381
length of database: 59,974,054
effective HSP length: 112
effective length of query: 269
effective length of database: 41,583,542
effective search space: 11185972798
effective search space used: 11185972798
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)


Medicago: description of AC140024.11