BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139854.7 + phase: 0 /pseudo
         (672 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

SCY1_YEAST (P53009) SCY1 protein                                       32  5.4
UB21_MOUSE (Q9QZL6) Ubiquitin carboxyl-terminal hydrolase 21 (EC...    32  7.1

>SCY1_YEAST (P53009) SCY1 protein
          Length = 804

 Score = 32.0 bits (71), Expect = 5.4
 Identities = 23/83 (27%), Positives = 31/83 (36%), Gaps = 10/83 (12%)

Query: 591 LEVKEGLRQLAFPETTLMSPPPR-------KVPTKGAKKKFDIARSKGKITSTSRIPSSG 643
           L  K  L    FP   L SPP         KV TKG        + + +        S+G
Sbjct: 686 LNPKNALATRGFPTRILNSPPQTPSSRTGSKVMTKGGSNDASSTKVEEEFNEFQSFSSTG 745

Query: 644 EVVDSQNPDSQW---SPSPTTSS 663
            +  +  P   W   +PSPT +S
Sbjct: 746 SIRQTSAPSDVWMNSTPSPTPTS 768


>UB21_MOUSE (Q9QZL6) Ubiquitin carboxyl-terminal hydrolase 21 (EC
           3.1.2.15) (Ubiquitin thiolesterase 21)
           (Ubiquitin-specific processing protease 21)
           (Deubiquitinating enzyme 21)
          Length = 566

 Score = 31.6 bits (70), Expect = 7.1
 Identities = 26/94 (27%), Positives = 38/94 (39%), Gaps = 8/94 (8%)

Query: 584 KLPFQMKLEVKEGLRQLAFPETTLMSPPPRKVPTKGAKKKFDIARSKGKITSTSR----- 638
           K+PF  +   KE    +  P + L   PPR  P     KK ++ R +   TS SR     
Sbjct: 26  KIPFPPRARSKERRNPVPGPNSMLRPLPPRPGPPDERLKKLELGRGR---TSGSRPRGPL 82

Query: 639 IPSSGEVVDSQNPDSQWSPSPTTSSYKRKKGVRS 672
               G  +    P +   P P+ ++  R K V S
Sbjct: 83  RADHGVPLPGSPPPAVALPLPSRTNLARSKSVSS 116


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.351    0.154    0.553 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,441,194
Number of Sequences: 164201
Number of extensions: 2606409
Number of successful extensions: 10510
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10508
Number of HSP's gapped (non-prelim): 3
length of query: 672
length of database: 59,974,054
effective HSP length: 117
effective length of query: 555
effective length of database: 40,762,537
effective search space: 22623208035
effective search space used: 22623208035
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (22.0 bits)
S2: 69 (31.2 bits)