BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.15 - phase: 0
(147 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
H2B_GOSHI (O22582) Histone H2B 265 2e-71
H2B_ARATH (P40283) Histone H2B 250 9e-67
H2B_TOBAC (P93354) Histone H2B 238 3e-63
H2B_CAPAN (O49118) Histone H2B (CaH2B) 238 3e-63
H2B1_MAIZE (P30755) Histone H2B.1 227 6e-60
H2B5_MAIZE (P54348) Histone H2B 226 1e-59
H2B3_MAIZE (Q43261) Histone H2B.3 226 1e-59
H2B1_WHEAT (P27807) Histone H2B 224 4e-59
H2B2_MAIZE (P30756) Histone H2B.2 223 2e-58
H2B4_MAIZE (P49120) Histone H2B.4 219 2e-57
H2B2_WHEAT (P05621) Histone H2B.2 201 5e-52
H2B1_CHLRE (P50565) Histone H2B-I 190 1e-48
H2B4_VOLCA (P16868) Histone H2B-IV 189 1e-48
H2B3_VOLCA (P16867) Histone H2B-III 189 2e-48
H2B4_CHLRE (P54347) Histone H2B-IV 188 3e-48
H2B2_CHLRE (P54345) Histone H2B-II 188 3e-48
H2B3_CHLRE (P54346) Histone H2B-III 188 4e-48
H2B_NEUCR (P37210) Histone H2B 177 7e-45
H2B_EMENI (P23754) Histone H2B 177 9e-45
H2B_AJECA (Q7Z9J4) Histone H2B 175 4e-44
>H2B_GOSHI (O22582) Histone H2B
Length = 147
Score = 265 bits (678), Expect = 2e-71
Identities = 140/148 (94%), Positives = 144/148 (96%), Gaps = 2/148 (1%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPK EKKPAEKKPAEEKK+ VAEKAPAEKKPKAGKKLPKEGG+AAGDKKK R KK+VET
Sbjct: 1 MAPKAEKKPAEKKPAEEKKA-VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 59
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 119
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
>H2B_ARATH (P40283) Histone H2B
Length = 150
Score = 250 bits (638), Expect = 9e-67
Identities = 130/150 (86%), Positives = 136/150 (90%), Gaps = 3/150 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNV 57
MAPK EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G+ KKK KK+V
Sbjct: 1 MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60
Query: 58 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 117
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREI
Sbjct: 61 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120
Query: 118 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>H2B_TOBAC (P93354) Histone H2B
Length = 146
Score = 238 bits (608), Expect = 3e-63
Identities = 122/147 (82%), Positives = 135/147 (90%), Gaps = 1/147 (0%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAP+ +KKPAEKKP EK + VAEKAPAEKKP+AGKKLP++ G+A KKKR++ +VETY
Sbjct: 1 MAPRADKKPAEKKPGAEK-TPVAEKAPAEKKPRAGKKLPRDAGAAGDKKKKRAEMSVETY 59
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIF+VLK VHPDIGISSKAMGIMNSFINDIFEKLA+ESSRLA YNKKPTI+SREIQTA
Sbjct: 60 KIYIFRVLKHVHPDIGISSKAMGIMNSFINDIFEKLARESSRLAGYNKKPTISSREIQTA 119
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 VRLVLPGELAKHAVSEGTKAVTKFTSS 146
>H2B_CAPAN (O49118) Histone H2B (CaH2B)
Length = 145
Score = 238 bits (608), Expect = 3e-63
Identities = 128/149 (85%), Positives = 134/149 (89%), Gaps = 6/149 (4%)
Query: 1 MAPKGE--KKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVE 58
MAPK KKPAEKKP EEKK AE+ PAEKKPKAGKKLPK+ G KKKR+KK++E
Sbjct: 1 MAPKAAAGKKPAEKKPVEEKK---AEEVPAEKKPKAGKKLPKDAGRP-DKKKKRAKKSIE 56
Query: 59 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 118
TYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ
Sbjct: 57 TYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 116
Query: 119 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 117 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>H2B1_MAIZE (P30755) Histone H2B.1
Length = 151
Score = 227 bits (579), Expect = 6e-60
Identities = 124/152 (81%), Positives = 132/152 (86%), Gaps = 6/152 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP----KEGGSAAGDKKKRSKK 55
MAPK EKKPA KKPAEE+ +T EKAPA KKPKA K+LP KEGG KKK +KK
Sbjct: 1 MAPKAEKKPAAKKPAEEEPATEKVEKAPAGKKPKAEKRLPAGKSKEGGEGKKGKKK-AKK 59
Query: 56 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 115
+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSR
Sbjct: 60 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 119
Query: 116 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>H2B5_MAIZE (P54348) Histone H2B
Length = 154
Score = 226 bits (577), Expect = 1e-59
Identities = 123/154 (79%), Positives = 133/154 (85%), Gaps = 7/154 (4%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLP--KEGGSAAGDKK--KRS 53
MAPK EKKPA KK AEE+ K+ AEKAPA KKPKA K+LP K G GDKK K++
Sbjct: 1 MAPKAEKKPAAKKVAEEEPSEKAAPAEKAPAGKKPKAEKRLPAGKSAGKEGGDKKGRKKA 60
Query: 54 KKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT 113
KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTIT
Sbjct: 61 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTIT 120
Query: 114 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
SREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 SREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 154
>H2B3_MAIZE (Q43261) Histone H2B.3
Length = 153
Score = 226 bits (577), Expect = 1e-59
Identities = 123/154 (79%), Positives = 133/154 (85%), Gaps = 8/154 (5%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP------KEGGSAAGDKKKRS 53
MAPK +KKPA KKPAEE+ +T AEKAPA KKPKA K+LP KEGG KKK +
Sbjct: 1 MAPKADKKPAAKKPAEEEPATEKAEKAPAGKKPKAEKRLPAGKSAGKEGGEGKKGKKK-A 59
Query: 54 KKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT 113
KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPT+T
Sbjct: 60 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTVT 119
Query: 114 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
SREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 SREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 153
>H2B1_WHEAT (P27807) Histone H2B
Length = 152
Score = 224 bits (572), Expect = 4e-59
Identities = 122/154 (79%), Positives = 132/154 (85%), Gaps = 9/154 (5%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP------KEGGSAAGDKKKRS 53
MAPK EKKPA KKPAEE+ + AEK PA KKPKA K+LP KEGG G KK++
Sbjct: 1 MAPKAEKKPAAKKPAEEEPAAEKAEKTPAGKKPKAEKRLPAGKSAAKEGGDKKG--KKKA 58
Query: 54 KKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT 113
KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTIT
Sbjct: 59 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTIT 118
Query: 114 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
SREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 SREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 152
>H2B2_MAIZE (P30756) Histone H2B.2
Length = 150
Score = 223 bits (567), Expect = 2e-58
Identities = 121/153 (79%), Positives = 131/153 (85%), Gaps = 9/153 (5%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLP------KEGGSAAGDKKKRSK 54
MAPK EKKPA KKPAEE+ + AEKAPA KKPKA K++P KEGG +KK K
Sbjct: 1 MAPKAEKKPAAKKPAEEEPA--AEKAPAGKKPKAEKRVPAGKSAGKEGGEGKRGRKK-GK 57
Query: 55 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 114
K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITS
Sbjct: 58 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITS 117
Query: 115 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
REIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 REIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>H2B4_MAIZE (P49120) Histone H2B.4
Length = 137
Score = 219 bits (558), Expect = 2e-57
Identities = 118/148 (79%), Positives = 128/148 (85%), Gaps = 12/148 (8%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLP-KEGGSAAGDKKKRSKKNVET 59
MAPK EKKPAEKKP EEK AEKKP+A K++P KEGG G KK++KK+VET
Sbjct: 1 MAPKAEKKPAEKKPTEEK---------AEKKPRAEKRVPGKEGGEKKG--KKKAKKSVET 49
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT
Sbjct: 50 YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQT 109
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 110 SVRLVLPGELAKHAVSEGTKAVTKFTSS 137
>H2B2_WHEAT (P05621) Histone H2B.2
Length = 149
Score = 201 bits (511), Expect = 5e-52
Identities = 109/149 (73%), Positives = 117/149 (78%), Gaps = 10/149 (6%)
Query: 9 PAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPK----------EGGSAAGDKKKRSKKNVE 58
P +K AE K AEK PA KKPKA K+LP EG + K ++KK VE
Sbjct: 1 PBKKPAAENKVEKAAEKTPAGKKPKAEKRLPAGKTASKEAGGEGKTRGRKKGSKAKKGVE 60
Query: 59 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 118
TYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQ
Sbjct: 61 TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQ 120
Query: 119 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
T+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TSVRLVLPGELAKHAVSEGTKAVTKFTSS 149
>H2B1_CHLRE (P50565) Histone H2B-I
Length = 153
Score = 190 bits (482), Expect = 1e-48
Identities = 102/152 (67%), Positives = 119/152 (78%), Gaps = 6/152 (3%)
Query: 1 MAPKGEKKPAEKK-----PAEEKKSTVAEKAPAEKKPKAGKKLPKEG-GSAAGDKKKRSK 54
MAPK ++KP ++ PA+ ++ AEKA + K + KK KE GS KK+ K
Sbjct: 1 MAPKKDEKPPTQEAGAEAPAKAERKPKAEKAAKKAKKEPSKKAAKEPKGSGEKKDKKKKK 60
Query: 55 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 114
VETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TS
Sbjct: 61 SAVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTS 120
Query: 115 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 146
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
>H2B4_VOLCA (P16868) Histone H2B-IV
Length = 155
Score = 189 bits (481), Expect = 1e-48
Identities = 108/156 (69%), Positives = 123/156 (78%), Gaps = 10/156 (6%)
Query: 1 MAPKG-EKKPAEK--KPAEEKKSTVAEKAPAEKKPKA----GKKLPKEGGSAAGDKKKRS 53
MAPK E+KPA + +P E K AEKAP +K+ KA K P G +A GDKKK+
Sbjct: 1 MAPKTKEEKPASEAVEPKAEAKPK-AEKAPKKKEKKAPAKKSAKEPAAGDAAEGDKKKKK 59
Query: 54 KK--NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPT 111
K ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT
Sbjct: 60 AKVAKSETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPT 119
Query: 112 ITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 120 VTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 155
>H2B3_VOLCA (P16867) Histone H2B-III
Length = 157
Score = 189 bits (479), Expect = 2e-48
Identities = 108/157 (68%), Positives = 123/157 (77%), Gaps = 10/157 (6%)
Query: 1 MAPKGEKKPAEKKP-AEEKKSTV---AEKAPAEKKPKA-GKKLPKE--GGSAAGDKKKRS 53
MAPK E+KPA + A E K+ A KAP +K+ KA KK+ KE G GDKK +
Sbjct: 1 MAPKKEEKPASQAAEAPEVKAEAKPKAVKAPKKKEKKAPAKKVAKEPSAGGEDGDKKSKK 60
Query: 54 KKNV---ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKP 110
K V ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKP
Sbjct: 61 KAKVAKSETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKP 120
Query: 111 TITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
T+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 121 TVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 157
>H2B4_CHLRE (P54347) Histone H2B-IV
Length = 153
Score = 188 bits (478), Expect = 3e-48
Identities = 102/152 (67%), Positives = 115/152 (75%), Gaps = 6/152 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLP--KEGGSAAGDKKKRSKKN-- 56
MAPK ++KPA + E + K AEK K KK P K GD +K+ KK
Sbjct: 1 MAPKKDEKPATAEAGAEAPAKAEAKPKAEKAAKKAKKEPSKKAAKEPKGDGEKKDKKKKK 60
Query: 57 --VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 114
VETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TS
Sbjct: 61 SAVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTS 120
Query: 115 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 146
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
>H2B2_CHLRE (P54345) Histone H2B-II
Length = 156
Score = 188 bits (478), Expect = 3e-48
Identities = 104/155 (67%), Positives = 119/155 (76%), Gaps = 9/155 (5%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKP-KAGKKLPKEGGSAA-------GDKKKR 52
MAPK ++KPA + +E KA A+ K KA KK KE A G+KK +
Sbjct: 1 MAPKKDEKPATRAATQEAGVEATAKAEAKPKAEKAAKKAKKEPAKKAAKEPKGDGEKKDK 60
Query: 53 SKKN-VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPT 111
KK+ VETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT
Sbjct: 61 KKKSAVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPT 120
Query: 112 ITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 146
+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 121 VTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 155
>H2B3_CHLRE (P54346) Histone H2B-III
Length = 153
Score = 188 bits (477), Expect = 4e-48
Identities = 102/152 (67%), Positives = 115/152 (75%), Gaps = 6/152 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLP--KEGGSAAGDKKKRSKKN-- 56
MAPK ++KPA + E + K AEK K KK P K GD +K+ KK
Sbjct: 1 MAPKKDEKPATAEAGAEAPAKAEAKPKAEKAGKKAKKEPAKKAAKEPKGDGEKKDKKKKK 60
Query: 57 --VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 114
VETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TS
Sbjct: 61 SAVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTS 120
Query: 115 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 146
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
>H2B_NEUCR (P37210) Histone H2B
Length = 137
Score = 177 bits (449), Expect = 7e-45
Identities = 94/140 (67%), Positives = 115/140 (82%), Gaps = 8/140 (5%)
Query: 8 KPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKIYIFKV 67
KPA+KKPA + +T A KAP +K AGKK +A+GDKKKR+K ETY YI+KV
Sbjct: 4 KPADKKPASKAPAT-ASKAPEKKD--AGKKT-----AASGDKKKRTKARKETYSSYIYKV 55
Query: 68 LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 127
LKQVHPD GIS++AM I+NSF+NDIFE++A E+S+LA YNKK TI+SREIQT+VRL+LPG
Sbjct: 56 LKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPG 115
Query: 128 ELAKHAVSEGTKAVTKFTSS 147
ELAKHAVSEGTKAVTK++SS
Sbjct: 116 ELAKHAVSEGTKAVTKYSSS 135
>H2B_EMENI (P23754) Histone H2B
Length = 139
Score = 177 bits (448), Expect = 9e-45
Identities = 95/140 (67%), Positives = 115/140 (81%), Gaps = 5/140 (3%)
Query: 8 KPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKIYIFKV 67
K AEKKP+ K+ A KAPAEKK +AGKK +A+G+KKKR K ETY YI+KV
Sbjct: 3 KAAEKKPSTGGKAP-AGKAPAEKK-EAGKKT---AAAASGEKKKRGKTRKETYSSYIYKV 57
Query: 68 LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 127
LKQVHPD GIS++AM I+NSF+NDIFE++A E+S+LA YNKK TI+SREIQT+VRL+LPG
Sbjct: 58 LKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPG 117
Query: 128 ELAKHAVSEGTKAVTKFTSS 147
ELAKHAVSEGTKAVTK++SS
Sbjct: 118 ELAKHAVSEGTKAVTKYSSS 137
>H2B_AJECA (Q7Z9J4) Histone H2B
Length = 137
Score = 175 bits (443), Expect = 4e-44
Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
Query: 15 AEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKIYIFKVLKQVHPD 74
A EKK + A KAPA K P+ K+ K+ +A G+KKKRSK ETY YI+KVLKQVHPD
Sbjct: 4 AAEKKPSTAGKAPAGKAPEK-KEAGKKTTAAGGEKKKRSKTRKETYSSYIYKVLKQVHPD 62
Query: 75 IGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 134
GIS++AM I+NSF+NDIFE++A E+S+LA YNKK TI+SREIQT+VRL+LPGELAKHAV
Sbjct: 63 TGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAV 122
Query: 135 SEGTKAVTKFTSS 147
SEGTKAVTK++SS
Sbjct: 123 SEGTKAVTKYSSS 135
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.306 0.125 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,190,734
Number of Sequences: 164201
Number of extensions: 644944
Number of successful extensions: 6175
Number of sequences better than 10.0: 523
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 3972
Number of HSP's gapped (non-prelim): 1795
length of query: 147
length of database: 59,974,054
effective HSP length: 100
effective length of query: 47
effective length of database: 43,553,954
effective search space: 2047035838
effective search space used: 2047035838
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC139841.15