BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.13 - phase: 0
(148 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
H2B_GOSHI (O22582) Histone H2B 272 2e-73
H2B_ARATH (P40283) Histone H2B 254 6e-68
H2B_CAPAN (O49118) Histone H2B (CaH2B) 243 1e-64
H2B_TOBAC (P93354) Histone H2B 242 2e-64
H2B1_MAIZE (P30755) Histone H2B.1 230 7e-61
H2B3_MAIZE (Q43261) Histone H2B.3 229 1e-60
H2B5_MAIZE (P54348) Histone H2B 228 5e-60
H2B1_WHEAT (P27807) Histone H2B 226 1e-59
H2B2_MAIZE (P30756) Histone H2B.2 224 4e-59
H2B4_MAIZE (P49120) Histone H2B.4 219 2e-57
H2B2_WHEAT (P05621) Histone H2B.2 204 4e-53
H2B1_CHLRE (P50565) Histone H2B-I 192 2e-49
H2B4_VOLCA (P16868) Histone H2B-IV 192 2e-49
H2B2_CHLRE (P54345) Histone H2B-II 192 3e-49
H2B4_CHLRE (P54347) Histone H2B-IV 191 4e-49
H2B3_CHLRE (P54346) Histone H2B-III 191 5e-49
H2B3_VOLCA (P16867) Histone H2B-III 189 2e-48
H2B_EMENI (P23754) Histone H2B 174 5e-44
H2B_AJECA (Q7Z9J4) Histone H2B 174 5e-44
H2B_SALTR (P02282) Histone H2B 173 1e-43
>H2B_GOSHI (O22582) Histone H2B
Length = 147
Score = 272 bits (695), Expect = 2e-73
Identities = 141/148 (95%), Positives = 145/148 (97%), Gaps = 1/148 (0%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPK EKKPAEKKPAEEKK+ VAEKAPAEKKPKAGKKLPKEGG+AAGDKKKKR KK+VET
Sbjct: 1 MAPKAEKKPAEKKPAEEKKA-VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 59
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 119
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
>H2B_ARATH (P40283) Histone H2B
Length = 150
Score = 254 bits (648), Expect = 6e-68
Identities = 134/151 (88%), Positives = 139/151 (91%), Gaps = 4/151 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKN 57
MAPK EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G A GDKKKK KK+
Sbjct: 1 MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKKS 59
Query: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 117
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSRE
Sbjct: 60 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 119
Query: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>H2B_CAPAN (O49118) Histone H2B (CaH2B)
Length = 145
Score = 243 bits (620), Expect = 1e-64
Identities = 130/150 (86%), Positives = 136/150 (90%), Gaps = 7/150 (4%)
Query: 1 MAPKGE--KKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNV 58
MAPK KKPAEKKP EEKK AE+ PAEKKPKAGKKLPK+ G DKKKKR+KK++
Sbjct: 1 MAPKAAAGKKPAEKKPVEEKK---AEEVPAEKKPKAGKKLPKDAGRP--DKKKKRAKKSI 55
Query: 59 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 118
ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI
Sbjct: 56 ETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 115
Query: 119 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 116 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>H2B_TOBAC (P93354) Histone H2B
Length = 146
Score = 242 bits (618), Expect = 2e-64
Identities = 126/148 (85%), Positives = 138/148 (93%), Gaps = 2/148 (1%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAP+ +KKPAEKKP EK + VAEKAPAEKKP+AGKKLP++ G AAGDKKKKR++ +VET
Sbjct: 1 MAPRADKKPAEKKPGAEK-TPVAEKAPAEKKPRAGKKLPRDAG-AAGDKKKKRAEMSVET 58
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIF+VLK VHPDIGISSKAMGIMNSFINDIFEKLA+ESSRLA YNKKPTI+SREIQT
Sbjct: 59 YKIYIFRVLKHVHPDIGISSKAMGIMNSFINDIFEKLARESSRLAGYNKKPTISSREIQT 118
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 AVRLVLPGELAKHAVSEGTKAVTKFTSS 146
>H2B1_MAIZE (P30755) Histone H2B.1
Length = 151
Score = 230 bits (587), Expect = 7e-61
Identities = 125/153 (81%), Positives = 134/153 (86%), Gaps = 7/153 (4%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP----KEGGSAAGDKKKKRSK 55
MAPK EKKPA KKPAEE+ +T EKAPA KKPKA K+LP KEGG G K KK++K
Sbjct: 1 MAPKAEKKPAAKKPAEEEPATEKVEKAPAGKKPKAEKRLPAGKSKEGGE--GKKGKKKAK 58
Query: 56 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 115
K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITS
Sbjct: 59 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITS 118
Query: 116 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
REIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 REIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>H2B3_MAIZE (Q43261) Histone H2B.3
Length = 153
Score = 229 bits (585), Expect = 1e-60
Identities = 124/155 (80%), Positives = 135/155 (87%), Gaps = 9/155 (5%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP------KEGGSAAGDKKKKR 53
MAPK +KKPA KKPAEE+ +T AEKAPA KKPKA K+LP KEGG G K KK+
Sbjct: 1 MAPKADKKPAAKKPAEEEPATEKAEKAPAGKKPKAEKRLPAGKSAGKEGGE--GKKGKKK 58
Query: 54 SKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTI 113
+KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPT+
Sbjct: 59 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTV 118
Query: 114 TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
TSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 TSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 153
>H2B5_MAIZE (P54348) Histone H2B
Length = 154
Score = 228 bits (580), Expect = 5e-60
Identities = 123/154 (79%), Positives = 134/154 (86%), Gaps = 6/154 (3%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLP--KEGGSAAGDKK-KKRS 54
MAPK EKKPA KK AEE+ K+ AEKAPA KKPKA K+LP K G GDKK +K++
Sbjct: 1 MAPKAEKKPAAKKVAEEEPSEKAAPAEKAPAGKKPKAEKRLPAGKSAGKEGGDKKGRKKA 60
Query: 55 KKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT 114
KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTIT
Sbjct: 61 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTIT 120
Query: 115 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
SREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 SREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 154
>H2B1_WHEAT (P27807) Histone H2B
Length = 152
Score = 226 bits (577), Expect = 1e-59
Identities = 122/152 (80%), Positives = 132/152 (86%), Gaps = 4/152 (2%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP--KEGGSAAGDKK-KKRSKK 56
MAPK EKKPA KKPAEE+ + AEK PA KKPKA K+LP K GDKK KK++KK
Sbjct: 1 MAPKAEKKPAAKKPAEEEPAAEKAEKTPAGKKPKAEKRLPAGKSAAKEGGDKKGKKKAKK 60
Query: 57 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 116
+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSR
Sbjct: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSR 120
Query: 117 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 152
>H2B2_MAIZE (P30756) Histone H2B.2
Length = 150
Score = 224 bits (572), Expect = 4e-59
Identities = 121/154 (78%), Positives = 133/154 (85%), Gaps = 10/154 (6%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLP------KEGGSAAGDKKKKRS 54
MAPK EKKPA KKPAEE+ + AEKAPA KKPKA K++P KEGG G + +K+
Sbjct: 1 MAPKAEKKPAAKKPAEEEPA--AEKAPAGKKPKAEKRVPAGKSAGKEGGE--GKRGRKKG 56
Query: 55 KKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT 114
KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTIT
Sbjct: 57 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTIT 116
Query: 115 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
SREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 117 SREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>H2B4_MAIZE (P49120) Histone H2B.4
Length = 137
Score = 219 bits (557), Expect = 2e-57
Identities = 118/149 (79%), Positives = 128/149 (85%), Gaps = 13/149 (8%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLP-KEGGSAAGDKKKKRSKKNVE 59
MAPK EKKPAEKKP EEK AEKKP+A K++P KEGG G KK++KK+VE
Sbjct: 1 MAPKAEKKPAEKKPTEEK---------AEKKPRAEKRVPGKEGGEKKG---KKKAKKSVE 48
Query: 60 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 119
TYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQ
Sbjct: 49 TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSREIQ 108
Query: 120 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
T+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 109 TSVRLVLPGELAKHAVSEGTKAVTKFTSS 137
>H2B2_WHEAT (P05621) Histone H2B.2
Length = 149
Score = 204 bits (520), Expect = 4e-53
Identities = 112/149 (75%), Positives = 119/149 (79%), Gaps = 9/149 (6%)
Query: 9 PAEKKPAEEKKSTVAEKAPAEKKPKAGKKLP------KEGGSAA---GDKKKKRSKKNVE 59
P +K AE K AEK PA KKPKA K+LP KE G G KK ++KK VE
Sbjct: 1 PBKKPAAENKVEKAAEKTPAGKKPKAEKRLPAGKTASKEAGGEGKTRGRKKGSKAKKGVE 60
Query: 60 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 119
TYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQ
Sbjct: 61 TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQ 120
Query: 120 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
T+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TSVRLVLPGELAKHAVSEGTKAVTKFTSS 149
>H2B1_CHLRE (P50565) Histone H2B-I
Length = 153
Score = 192 bits (489), Expect = 2e-49
Identities = 101/152 (66%), Positives = 119/152 (77%), Gaps = 5/152 (3%)
Query: 1 MAPKGEKKPAEKK-----PAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSK 55
MAPK ++KP ++ PA+ ++ AEKA + K + KK KE + K KK+ K
Sbjct: 1 MAPKKDEKPPTQEAGAEAPAKAERKPKAEKAAKKAKKEPSKKAAKEPKGSGEKKDKKKKK 60
Query: 56 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 115
VETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TS
Sbjct: 61 SAVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTS 120
Query: 116 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 147
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
>H2B4_VOLCA (P16868) Histone H2B-IV
Length = 155
Score = 192 bits (488), Expect = 2e-49
Identities = 109/156 (69%), Positives = 125/156 (79%), Gaps = 9/156 (5%)
Query: 1 MAPKG-EKKPAEK--KPAEEKKSTVAEKAPAEKKPKA----GKKLPKEGGSAAGDKKKKR 53
MAPK E+KPA + +P E K AEKAP +K+ KA K P G +A GDKKKK+
Sbjct: 1 MAPKTKEEKPASEAVEPKAEAKPK-AEKAPKKKEKKAPAKKSAKEPAAGDAAEGDKKKKK 59
Query: 54 SK-KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPT 112
+K ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT
Sbjct: 60 AKVAKSETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPT 119
Query: 113 ITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 120 VTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 155
>H2B2_CHLRE (P54345) Histone H2B-II
Length = 156
Score = 192 bits (487), Expect = 3e-49
Identities = 104/155 (67%), Positives = 118/155 (76%), Gaps = 8/155 (5%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKP-KAGKKLPKEGGSAA-------GDKKKK 52
MAPK ++KPA + +E KA A+ K KA KK KE A G+KK K
Sbjct: 1 MAPKKDEKPATRAATQEAGVEATAKAEAKPKAEKAAKKAKKEPAKKAAKEPKGDGEKKDK 60
Query: 53 RSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPT 112
+ K VETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT
Sbjct: 61 KKKSAVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPT 120
Query: 113 ITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 147
+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 121 VTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 155
>H2B4_CHLRE (P54347) Histone H2B-IV
Length = 153
Score = 191 bits (486), Expect = 4e-49
Identities = 102/152 (67%), Positives = 117/152 (76%), Gaps = 5/152 (3%)
Query: 1 MAPKGEKKPAEKK-----PAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSK 55
MAPK ++KPA + PA+ + AEKA + K + KK KE K KK+ K
Sbjct: 1 MAPKKDEKPATAEAGAEAPAKAEAKPKAEKAAKKAKKEPSKKAAKEPKGDGEKKDKKKKK 60
Query: 56 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 115
VETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TS
Sbjct: 61 SAVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTS 120
Query: 116 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 147
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
>H2B3_CHLRE (P54346) Histone H2B-III
Length = 153
Score = 191 bits (485), Expect = 5e-49
Identities = 102/152 (67%), Positives = 117/152 (76%), Gaps = 5/152 (3%)
Query: 1 MAPKGEKKPAEKK-----PAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSK 55
MAPK ++KPA + PA+ + AEKA + K + KK KE K KK+ K
Sbjct: 1 MAPKKDEKPATAEAGAEAPAKAEAKPKAEKAGKKAKKEPAKKAAKEPKGDGEKKDKKKKK 60
Query: 56 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 115
VETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TS
Sbjct: 61 SAVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTS 120
Query: 116 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 147
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
>H2B3_VOLCA (P16867) Histone H2B-III
Length = 157
Score = 189 bits (479), Expect = 2e-48
Identities = 108/157 (68%), Positives = 123/157 (77%), Gaps = 9/157 (5%)
Query: 1 MAPKGEKKPAEKKP-AEEKKSTV---AEKAPAEKKPKA-GKKLPKE--GGSAAGDKKKKR 53
MAPK E+KPA + A E K+ A KAP +K+ KA KK+ KE G GDKK K+
Sbjct: 1 MAPKKEEKPASQAAEAPEVKAEAKPKAVKAPKKKEKKAPAKKVAKEPSAGGEDGDKKSKK 60
Query: 54 SKK--NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKP 111
K ETYK+YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKP
Sbjct: 61 KAKVAKSETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKP 120
Query: 112 TITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
T+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 121 TVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 157
>H2B_EMENI (P23754) Histone H2B
Length = 139
Score = 174 bits (442), Expect = 5e-44
Identities = 95/141 (67%), Positives = 114/141 (80%), Gaps = 6/141 (4%)
Query: 8 KPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETYKIYIFK 67
K AEKKP+ K+ A KAPAEKK +AGKK +AA +KKKR K ETY YI+K
Sbjct: 3 KAAEKKPSTGGKAP-AGKAPAEKK-EAGKKT----AAAASGEKKKRGKTRKETYSSYIYK 56
Query: 68 VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 127
VLKQVHPD GIS++AM I+NSF+NDIFE++A E+S+LA YNKK TI+SREIQT+VRL+LP
Sbjct: 57 VLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILP 116
Query: 128 GELAKHAVSEGTKAVTKFTSS 148
GELAKHAVSEGTKAVTK++SS
Sbjct: 117 GELAKHAVSEGTKAVTKYSSS 137
>H2B_AJECA (Q7Z9J4) Histone H2B
Length = 137
Score = 174 bits (442), Expect = 5e-44
Identities = 93/137 (67%), Positives = 111/137 (80%), Gaps = 8/137 (5%)
Query: 15 AEEKKSTVAEKAPAEKKPK---AGKKLPKEGGSAAGDKKKKRSKKNVETYKIYIFKVLKQ 71
A EKK + A KAPA K P+ AGKK +AAG +KKKRSK ETY YI+KVLKQ
Sbjct: 4 AAEKKPSTAGKAPAGKAPEKKEAGKKT-----TAAGGEKKKRSKTRKETYSSYIYKVLKQ 58
Query: 72 VHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELA 131
VHPD GIS++AM I+NSF+NDIFE++A E+S+LA YNKK TI+SREIQT+VRL+LPGELA
Sbjct: 59 VHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELA 118
Query: 132 KHAVSEGTKAVTKFTSS 148
KHAVSEGTKAVTK++SS
Sbjct: 119 KHAVSEGTKAVTKYSSS 135
>H2B_SALTR (P02282) Histone H2B
Length = 123
Score = 173 bits (438), Expect = 1e-43
Identities = 89/122 (72%), Positives = 102/122 (82%), Gaps = 2/122 (1%)
Query: 27 PAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIM 86
PA+ PK G K + G KK+KRS+K E+Y IY++KVLKQVHPD GISSKAMGIM
Sbjct: 3 PAKSAPKKGSKKAVTKTAGKGGKKRKRSRK--ESYAIYVYKVLKQVHPDTGISSKAMGIM 60
Query: 87 NSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFT 146
NSF+NDIFE++A ESSRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+T
Sbjct: 61 NSFVNDIFERIAGESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYT 120
Query: 147 SS 148
SS
Sbjct: 121 SS 122
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.306 0.125 0.327
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,350,791
Number of Sequences: 164201
Number of extensions: 657030
Number of successful extensions: 6729
Number of sequences better than 10.0: 544
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 220
Number of HSP's that attempted gapping in prelim test: 4177
Number of HSP's gapped (non-prelim): 1977
length of query: 148
length of database: 59,974,054
effective HSP length: 100
effective length of query: 48
effective length of database: 43,553,954
effective search space: 2090589792
effective search space used: 2090589792
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC139841.13