BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139747.6 + phase: 0 /pseudo
(1770 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MUC2_HUMAN (Q02817) Mucin 2 precursor (Intestinal mucin 2) 44 0.004
VGLX_EHV1B (P28968) Glycoprotein X precursor 39 0.13
GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8) 38 0.22
MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment) 37 0.49
EFL5_MOUSE (Q8BH27) Multiple EGF-like-domain protein 5 precursor 37 0.49
DYNA_NEUCR (Q01397) Dynactin, 150 kDa isoform (150 kDa dynein-as... 37 0.63
YS89_CAEEL (Q09624) Hypothetical protein ZK945.9 in chromosome II 36 0.83
AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor 36 1.1
KRE1_YEAST (P17260) KRE1 protein precursor 35 1.8
MU5A_HUMAN (P98088) Mucin 5AC (Mucin 5 subtype AC, tracheobronch... 35 2.4
MUB1_XENLA (P38565) Integumentary mucin B.1 (FIM-B.1) (Fragment) 34 3.2
LZT2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 (... 34 3.2
MU13_RAT (P97881) Mucin 13 precursor 34 4.1
LZT2_MOUSE (Q91YU6) Leucine zipper putative tumor suppressor 2 34 4.1
DAN4_YEAST (P47179) Cell wall protein DAN4 precursor 33 5.4
MUC2_RAT (Q62635) Mucin 2 precursor (Intestinal mucin 2) (Fragment) 33 7.0
VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane an... 33 9.2
PKNA_ANASP (P54734) Serine/threonine-protein kinase pknA (EC 2.7... 33 9.2
>MUC2_HUMAN (Q02817) Mucin 2 precursor (Intestinal mucin 2)
Length = 5179
Score = 43.9 bits (102), Expect = 0.004
Identities = 36/93 (38%), Positives = 43/93 (45%), Gaps = 11/93 (11%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S + T P + P T T S P TT
Sbjct: 1631 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP--TTTPSSPITTT 1688
Query: 62 SS-----HSRPSPTLVPSGP--SLYLPSRGTRP 87
S + PSPT PS P + PS T P
Sbjct: 1689 PSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTP 1721
Score = 43.5 bits (101), Expect = 0.005
Identities = 30/76 (39%), Positives = 39/76 (50%), Gaps = 7/76 (9%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S + T P + + P T T S P TT
Sbjct: 1552 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTT--PSPPTITTTTPPPTTTPSPPTTTT 1609
Query: 62 SSHSRPSPTLVPSGPS 77
++ P PT PS P+
Sbjct: 1610 TT---PPPTTTPSPPT 1622
Score = 43.5 bits (101), Expect = 0.005
Identities = 27/76 (35%), Positives = 36/76 (46%), Gaps = 3/76 (3%)
Query: 2 IPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
I +TT PPTT P+ TTPS ++ T P + + P T T S P T
Sbjct: 1669 ITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTM 1728
Query: 62 SSHSRPSPTLVPSGPS 77
++ PSPT PS P+
Sbjct: 1729 TT---PSPTTTPSPPT 1741
Score = 40.4 bits (93), Expect = 0.044
Identities = 30/77 (38%), Positives = 40/77 (50%), Gaps = 8/77 (10%)
Query: 3 PSTTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
P+TT PPTT P+ TT TTP ++ S I P A+ ++ P T T S P T
Sbjct: 1473 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTT-TLPP--TTTPSPPTTT 1529
Query: 61 TSSHSRPSPTLVPSGPS 77
T++ P PT PS P+
Sbjct: 1530 TTT---PPPTTTPSPPT 1543
Score = 39.3 bits (90), Expect = 0.098
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 15/76 (19%)
Query: 4 STTILPPTTIPTK--TTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
+TT LPPTT P+ TT TTP ++ S T PL T T S P +TT
Sbjct: 1412 TTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLP----------TTTPSPPISTT 1461
Query: 62 SSHSRPSPTLVPSGPS 77
++ P PT PS P+
Sbjct: 1462 TT---PPPTTTPSPPT 1474
Score = 39.3 bits (90), Expect = 0.098
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 3 PSTTILPPTTIP----TKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
P+TT PPTT P T TT P++ S + T P +P T T S P
Sbjct: 1614 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPI 1669
Query: 59 NTTSSHSRPSPTLVPSGPSLYLPSRGT 85
TT++ P PT PS P PS T
Sbjct: 1670 TTTTT---PPPTTTPSSPITTTPSPPT 1693
Score = 38.1 bits (87), Expect = 0.22
Identities = 32/84 (38%), Positives = 42/84 (49%), Gaps = 9/84 (10%)
Query: 1 TIPSTTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
TI +TT PPTT P+ TT TTP ++ S + I P ++ P T T S P
Sbjct: 1590 TITTTT-PPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP-PTSTTTLPP--TTTPSPPP 1645
Query: 59 NTTSSHSRPSPTLVPSGPSLYLPS 82
TT++ P PT PS P+ PS
Sbjct: 1646 TTTTT---PPPTTTPSPPTTTTPS 1666
Score = 38.1 bits (87), Expect = 0.22
Identities = 31/89 (34%), Positives = 39/89 (42%), Gaps = 10/89 (11%)
Query: 4 STTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT--- 60
+TT PPTT P+ T TTPS + + T P + P T T S P T
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627
Query: 61 --TSSHSRPSPTLVPSGPSLYLPSRGTRP 87
TS+ + P PT PS P P+ T P
Sbjct: 1628 PPTSTTTLP-PTTTPSPP----PTTTTTP 1651
Score = 36.6 bits (83), Expect = 0.63
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 3 PSTTILPPTTIP----TKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
P+TT PPTT P T TT P++ S + T P +P T T S P
Sbjct: 1535 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPT 1590
Query: 59 NTTSSHSRPSPTLVPSGPS 77
TT++ P PT PS P+
Sbjct: 1591 ITTTT---PPPTTTPSPPT 1606
>VGLX_EHV1B (P28968) Glycoprotein X precursor
Length = 797
Score = 38.9 bits (89), Expect = 0.13
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
Score = 32.7 bits (73), Expect = 9.2
Identities = 23/78 (29%), Positives = 37/78 (46%), Gaps = 5/78 (6%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
T +T PT+ PT T TTPS ++ + ++T + + F T + + P+++
Sbjct: 309 TSAESTTEAPTSTPT-TDTTTPSEATTATTSPESTTVSASTTSATTTAFTTESHTSPDSS 367
Query: 61 TSSHSRPSP----TLVPS 74
T S S P TL PS
Sbjct: 368 TGSTSTAEPSSTFTLTPS 385
>GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)
Length = 544
Score = 38.1 bits (87), Expect = 0.22
Identities = 26/79 (32%), Positives = 37/79 (45%), Gaps = 8/79 (10%)
Query: 10 PTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTTSSHSRPSP 69
PT PT +TP+S SQ TI P + ++ P T S P +T + S P+P
Sbjct: 120 PTPTPTSKPTSTPTSTPSQ------TIPPTVSP--TVPPQTTSPTSKPTSTPTPTSTPTP 171
Query: 70 TLVPSGPSLYLPSRGTRPR 88
T P+ S +P T P+
Sbjct: 172 TSTPTPTSQTIPPPTTTPK 190
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)
Length = 662
Score = 37.0 bits (84), Expect = 0.49
Identities = 23/77 (29%), Positives = 36/77 (45%), Gaps = 6/77 (7%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
T P+TT P TT TK T TTP++ ++ + T + A T T + P T
Sbjct: 405 TTPTTTTTPTTTTTTKATTTTPTTTTTTPTTTTTT------TTTTKATTTTPTTTTPTTT 458
Query: 61 TSSHSRPSPTLVPSGPS 77
T+ + +PT + P+
Sbjct: 459 TTKATTTTPTTTTTTPT 475
Score = 36.6 bits (83), Expect = 0.63
Identities = 21/77 (27%), Positives = 34/77 (43%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
T +TT P TT T TT TT ++ + + + T P + T T + P T
Sbjct: 418 TTKATTTTPTTTTTTPTTTTTTTTTTKATTTTPTTTTPTTTTTKATTTTPTTTTTTPTTT 477
Query: 61 TSSHSRPSPTLVPSGPS 77
T+ + +PT + P+
Sbjct: 478 TTKATTTTPTTTTTTPT 494
Score = 36.2 bits (82), Expect = 0.83
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKAT 35
T P+TT PTT TK T TTP++ ++ + +KAT
Sbjct: 484 TTPTTTTTTPTTTTTKATTTTPTTTTTTTTTTKAT 518
Score = 34.3 bits (77), Expect = 3.2
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
T +TT TT PT TT TT ++ ++ + + T P + T T + P T
Sbjct: 437 TTTTTTTKATTTTPTTTTPTTTTTKATTTTPTTTTTTPTTTTTKATTTTPTTTTTTPTTT 496
Query: 61 TSSHSRPSPT 70
T+ + +PT
Sbjct: 497 TTKATTTTPT 506
>EFL5_MOUSE (Q8BH27) Multiple EGF-like-domain protein 5 precursor
Length = 600
Score = 37.0 bits (84), Expect = 0.49
Identities = 32/74 (43%), Positives = 38/74 (51%), Gaps = 13/74 (17%)
Query: 9 PPTTIPTKTTATTPSSGSSQ-------SAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
PP T KT ATTPS+GS + SA+ AT P A DL P +E G TT
Sbjct: 78 PPRTTVRKTGATTPSAGSPEIIPPLRTSAQPAATPFP-ALDLSPATP----SEDGHTPTT 132
Query: 62 SS-HSRPSPTLVPS 74
S SRP+PT + S
Sbjct: 133 ESPPSRPAPTTLAS 146
>DYNA_NEUCR (Q01397) Dynactin, 150 kDa isoform (150 kDa
dynein-associated polypeptide) (DP-150) (DAP-150)
(p150-glued)
Length = 1300
Score = 36.6 bits (83), Expect = 0.63
Identities = 32/91 (35%), Positives = 42/91 (45%), Gaps = 15/91 (16%)
Query: 5 TTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTTSSH 64
TT PT PTK AT SSG+ + + +T + P T + P+ +TS H
Sbjct: 72 TTFNSPTRSPTKQLATASSSGNPSRSGTPST---------TTKPAGPTTRTRPSLSTSRH 122
Query: 65 SR---PSPTL-VPSGPSLYLPSRGTRPRCGA 91
S P+PT PS + S GTRP GA
Sbjct: 123 SMGPPPTPTTRTTRKPS--VSSVGTRPSIGA 151
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9 in chromosome II
Length = 3178
Score = 36.2 bits (82), Expect = 0.83
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
T ++T+ TT+PT T+ T + +S S S +T + S + FT T S ++
Sbjct: 284 TTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTST------TIESTSTTFTSTASTSTSS 337
Query: 61 TSSHSRPSPTLVPSGPSLYL 80
TS+ + S T+ S S L
Sbjct: 338 TSTTQQSSSTITSSPSSTTL 357
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor
Length = 725
Score = 35.8 bits (81), Expect = 1.1
Identities = 22/87 (25%), Positives = 42/87 (47%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
T PS+T P++ T +++T+ SS S+ ++ S + P + S + + + + +
Sbjct: 191 TSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQS 250
Query: 61 TSSHSRPSPTLVPSGPSLYLPSRGTRP 87
++S S S + PS S S T P
Sbjct: 251 STSTSSSSTSTSPSSTSTSSSSTSTSP 277
Score = 34.7 bits (78), Expect = 2.4
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
T+ STT PTT +T+T+PSS S+ + + + + S + + T + P++T
Sbjct: 172 TLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSST 231
Query: 61 TSSHSRPS 68
++S S S
Sbjct: 232 STSSSLTS 239
Score = 33.1 bits (74), Expect = 7.0
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*P----LANDLWSIAPFFTCTESG 56
T PS+T + T +++T+ S S+ ++ S + P ++ S +P T +
Sbjct: 226 TSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSAS 285
Query: 57 PNNTTSSHSRPSPTLVPSGPSL 78
+T+S + SP+L S P+L
Sbjct: 286 STSTSSYSTSTSPSLTSSSPTL 307
>KRE1_YEAST (P17260) KRE1 protein precursor
Length = 313
Score = 35.0 bits (79), Expect = 1.8
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 1 TIPSTTILPPTTIPT----KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFF-TCTES 55
T+ T+LP TT T KTT T P++ SS S+ + NDL + T T S
Sbjct: 86 TVNRATMLPTTTTSTSSTGKTTTTVPTATSSLSSGLYLSTVTTTNDLGTTVTLTQTFTHS 145
Query: 56 GPNNTTSSHSRPSPTLVPSGPS 77
+ T+S+ S S ++ SG S
Sbjct: 146 STSATSSASSSVSSSVSSSGSS 167
>MU5A_HUMAN (P98088) Mucin 5AC (Mucin 5 subtype AC,
tracheobronchial) (Tracheobronchial mucin) (TBM) (Major
airway glycoprotein) (Fragment)
Length = 1233
Score = 34.7 bits (78), Expect = 2.4
Identities = 23/84 (27%), Positives = 43/84 (50%), Gaps = 8/84 (9%)
Query: 3 PSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPF-FTCTESGPNNTT 61
P TT P+ +PT +T + P++ ++ ++ + T P S++P T T S P +T
Sbjct: 88 PGTT---PSPVPTTSTTSAPTTSTTSASTASTTSGPGT----SLSPVPTTSTTSAPTTST 140
Query: 62 SSHSRPSPTLVPSGPSLYLPSRGT 85
+S +P+ VP+ + P+ T
Sbjct: 141 TSGPGTTPSPVPTTSTTSAPTTST 164
>MUB1_XENLA (P38565) Integumentary mucin B.1 (FIM-B.1) (Fragment)
Length = 398
Score = 34.3 bits (77), Expect = 3.2
Identities = 30/88 (34%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 3 PSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGP---NN 59
PS T T P++TT + + S + ES AP T ES P
Sbjct: 3 PSETTGESTPAPSETTGESTPAPSETTGESTP------------APSETTGESTPAPSET 50
Query: 60 TTSSHSRPSPTLVPSGPSLYLPSRGTRP 87
T S PS T VPSG S PS T P
Sbjct: 51 TGESTPAPSETTVPSGESTPAPSETTVP 78
>LZT2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2
(Protein LAPSER1)
Length = 669
Score = 34.3 bits (77), Expect = 3.2
Identities = 25/67 (37%), Positives = 35/67 (51%), Gaps = 3/67 (4%)
Query: 22 PSSGSSQSAESKATI*PLANDLW-SIAPFFTCTESGPNNTTS--SHSRPSPTLVPSGPSL 78
P+S SS S+ S A PLA W S P T ++SG N+ +S ++S S P
Sbjct: 186 PASSSSSSSSSSAADKPLAFSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTTSSPGG 245
Query: 79 YLPSRGT 85
+LPS G+
Sbjct: 246 HLPSHGS 252
>MU13_RAT (P97881) Mucin 13 precursor
Length = 547
Score = 33.9 bits (76), Expect = 4.1
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 3 PSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTTS 62
P TT LP TT TTAT P+S S Q+ P L S T T + P +T S
Sbjct: 80 PGTTQLPGTTSTPTTTATQPTSTSFQT--------PGTTQLPSSTSTPTTTATQPTSTAS 131
Query: 63 SHSRPSPTLVPSGPS 77
P T P G S
Sbjct: 132 --QTPGTTQPPGGAS 144
Score = 33.1 bits (74), Expect = 7.0
Identities = 26/75 (34%), Positives = 33/75 (43%), Gaps = 10/75 (13%)
Query: 3 PSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTTS 62
P TT LP TT TTAT P+ S+Q+ P L T T + P T++
Sbjct: 53 PGTTQLPSTTSTPTTTATQPTXTSTQT--------PGTTQLPGTTSTPTTTATQP--TST 102
Query: 63 SHSRPSPTLVPSGPS 77
S P T +PS S
Sbjct: 103 SFQTPGTTQLPSSTS 117
>LZT2_MOUSE (Q91YU6) Leucine zipper putative tumor suppressor 2
Length = 671
Score = 33.9 bits (76), Expect = 4.1
Identities = 28/74 (37%), Positives = 38/74 (50%), Gaps = 5/74 (6%)
Query: 22 PSSGSSQSAESKATI*PLANDLW-SIAPFFTCTESGPNNTTS--SHSRPSPTLVPSGPSL 78
P+S SS S+ S A PLA W S P T ++SG N+ +S ++S + P
Sbjct: 186 PASSSSSSSSSSAADKPLALSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTTNSPGG 245
Query: 79 YLPSRGTRPRCGAL 92
+LPS G P GAL
Sbjct: 246 HLPSHG--PGRGAL 257
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor
Length = 1161
Score = 33.5 bits (75), Expect = 5.4
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 1 TIPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
TI STT TT T TT+TTP++ ++ + + +T S P + T + P +
Sbjct: 141 TITSTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTT--------STTPTTSTTSTTPTTS 192
Query: 61 TSSHSRPSPT 70
T+S + + T
Sbjct: 193 TTSTTPTTST 202
>MUC2_RAT (Q62635) Mucin 2 precursor (Intestinal mucin 2) (Fragment)
Length = 1513
Score = 33.1 bits (74), Expect = 7.0
Identities = 23/75 (30%), Positives = 40/75 (52%), Gaps = 7/75 (9%)
Query: 4 STTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTTSS 63
++T+ P T+ T TT+ T S +S ++ + +T P + +P + T P+ TTS+
Sbjct: 1431 TSTVSPTTSPTTSTTSPTTSPTTSTTSPTTSTTSP------TPSPTTSTTSPTPSPTTST 1484
Query: 64 HS-RPSPTLVPSGPS 77
S PSPT + P+
Sbjct: 1485 TSPTPSPTTSTTSPT 1499
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane
antigen) (MA)
Length = 907
Score = 32.7 bits (73), Expect = 9.2
Identities = 24/78 (30%), Positives = 34/78 (42%), Gaps = 1/78 (1%)
Query: 1 TIPSTTILPPTTIPTKTTAT-TPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNN 59
T P TT P T PT T TP++ S A + T + L +P T PN
Sbjct: 510 TSPVTTPTPNATSPTPAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNA 569
Query: 60 TTSSHSRPSPTLVPSGPS 77
T+ + + SPT + P+
Sbjct: 570 TSPTLGKTSPTSAVTTPT 587
>PKNA_ANASP (P54734) Serine/threonine-protein kinase pknA (EC
2.7.1.37)
Length = 564
Score = 32.7 bits (73), Expect = 9.2
Identities = 34/95 (35%), Positives = 42/95 (43%), Gaps = 14/95 (14%)
Query: 2 IPSTTILPP-TTIPTKTTAT-------TPSSGSSQSAESKATI*PLANDLWSI--APFFT 51
+ TT LP TTI T T TP + SQ+ T P A+ + I PF T
Sbjct: 362 VTQTTSLPSETTISNNDTPTVEPSPTDTPETPISQTVTQDPT--PQASVRFPINSRPFTT 419
Query: 52 CTESGPNNTTS-SHSRPSPTLVPSGPSLYLPSRGT 85
+S P NTT + S P PT PS P + P T
Sbjct: 420 PIDSKPRNTTEPTTSVPQPT-TPSEPQITTPVEAT 453
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.359 0.158 0.619
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,059,714
Number of Sequences: 164201
Number of extensions: 6828386
Number of successful extensions: 25038
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 24186
Number of HSP's gapped (non-prelim): 275
length of query: 1770
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1646
effective length of database: 39,613,130
effective search space: 65203211980
effective search space used: 65203211980
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 73 (32.7 bits)
Medicago: description of AC139747.6