Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139747.4 + phase: 0 
         (500 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

SKIL_MOUSE (Q60665) Ski-related oncogene SNO isoform SNON1/DE3         38  0.070
STAR_CHICK (Q9DG09) Steroidogenic acute regulatory protein, mito...    36  0.20
DYHC_CAEEL (Q19020) Dynein heavy chain, cytosolic (DYHC)               35  0.59
K2C7_HUMAN (P08729) Keratin, type II cytoskeletal 7 (Cytokeratin...    34  0.77
YK16_SCHPO (Q9HDY4) Putative ATP-dependent RNA helicase PB1A10.0...    34  1.0
TPM1_YEAST (P17536) Tropomyosin 1                                      33  1.3
HOM1_RAT (Q9Z214) Homer protein homolog 1 (PSD-Zip45) (VASP/Ena ...    33  1.3
YJH6_YEAST (P47035) Hypothetical 128.5 kDa protein in SCP160-SMC...    33  1.7
SYS2_CLOAB (Q97N21) Seryl-tRNA synthetase 2 (EC 6.1.1.11) (Serin...    33  1.7
C190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 1...    33  1.7
ALSR_BACSU (Q04778) HTH-type transcriptional regulator alsR (Als...    33  1.7
YCEH_BACSU (O34833) Hypothetical protein yceH                          33  2.2
TEK2_HUMAN (Q9UIF3) Tektin-2 (Testicular tektin) (Tektin-t) (Tes...    33  2.2
Y321_MYCGE (P47563) Hypothetical lipoprotein MG321 precursor           32  2.9
KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen)         32  2.9
WTAP_MOUSE (Q9ER69) Wilms' tumor 1-associating protein (WT1-asso...    32  3.8
WTAP_HUMAN (Q15007) Wilms' tumor 1-associating protein (WT1-asso...    32  3.8
STAR_XENLA (Q9DG08) Steroidogenic acute regulatory protein (StAR...    32  5.0
RA50_AQUAE (O67124) Probable DNA double-strand break repair rad5...    32  5.0
NLFA_DROME (Q86NP2) Negative elongation factor A homolog               32  5.0

>SKIL_MOUSE (Q60665) Ski-related oncogene SNO isoform SNON1/DE3
          Length = 629

 Score = 37.7 bits (86), Expect = 0.070
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 17/133 (12%)

Query: 317 EILLEKHAMEQSKQFQELKNQTGSLNDSFVKLTS----KVDSIAIHTRMLETQISQVAQK 372
           ++ +E   +  SK  +EL  +  +L      L S    +++   I  R LE ++ QV Q+
Sbjct: 499 QLQMEVEMLSSSKAMKELTEEQQNLQKELESLQSEHAQRMEEFYIEQRDLEKKLEQVMQQ 558

Query: 373 VATSSPTLEVFPGQTEANPKSLINAIQLR--------DGKQLEDTIMKTKTIEGEIESEK 424
             T   TLE      +  P+      +LR        D ++L+D + + +    ++E   
Sbjct: 559 KCTCDSTLE-----KDREPEYAAQLAELRQRLDHAEADRQELQDELRQEREARQKLEMMI 613

Query: 425 QQGEKVIGESDKP 437
           ++ +  IG+S KP
Sbjct: 614 KELKLQIGKSSKP 626


>STAR_CHICK (Q9DG09) Steroidogenic acute regulatory protein,
           mitochondrial precursor (StAR) (StARD1)
          Length = 281

 Score = 36.2 bits (82), Expect = 0.20
 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 16/128 (12%)

Query: 331 FQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEAN 390
           +Q L+N TG    + V ++ ++  ++  +    T ISQV ++ +  S  LE  P      
Sbjct: 14  YQHLRNVTGLRRQAAVAISQELSKLSCRSTGPSTWISQVRRRSSLLSSRLEEKP------ 67

Query: 391 PKSLINAIQLRDGKQLEDTIMKTKTIEGEIESEKQQ-----GEKVIGESDKPIVSPPYKL 445
                + +++   KQ E+ + K+ +I G+ E  K +     G+KV+ +   P V   ++L
Sbjct: 68  ----FSEMEMSYIKQGEEALQKSLSILGDQEGWKTETVADNGDKVLSKV-LPDVGKVFRL 122

Query: 446 KIHVPQRL 453
           ++ V Q L
Sbjct: 123 EVVVDQPL 130


>DYHC_CAEEL (Q19020) Dynein heavy chain, cytosolic (DYHC)
          Length = 4568

 Score = 34.7 bits (78), Expect = 0.59
 Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 14/169 (8%)

Query: 322  KHAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPTLE 381
            +H ++  KQF  L          F +  S ++   IH  +   +IS+  ++V     +L+
Sbjct: 3117 RHFLDFIKQFMSL----------FHEKRSDLEEEKIHLNIGLNKISETEEQVKELQKSLK 3166

Query: 382  VFPGQTEANPKSLINAIQ--LRDGKQLEDTIMKTKTIEGEI-ESEKQQGEK-VIGESDKP 437
            +   + +   ++    ++  L D ++ E+    ++ ++ E+ E  KQ  EK    E+D  
Sbjct: 3167 LKSNELQEKKEAANLKLKEMLGDQQKAEEEKKFSEQLQKELAEQLKQMAEKKTFVENDLA 3226

Query: 438  IVSPPYKLKIHVPQRLAKPNFIVIESFSTPCVIESETIEKAMCDLGENL 486
             V P         Q + K   + ++S S+P V    T+E     LGEN+
Sbjct: 3227 QVEPAVAEAQTAVQGIKKSQLVEVKSMSSPPVTVKLTLEAICILLGENV 3275


>K2C7_HUMAN (P08729) Keratin, type II cytoskeletal 7 (Cytokeratin 7)
           (K7) (CK 7) (Sarcolectin)
          Length = 468

 Score = 34.3 bits (77), Expect = 0.77
 Identities = 30/101 (29%), Positives = 51/101 (49%), Gaps = 6/101 (5%)

Query: 332 QELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQV-AQKVATSSPTLEVFPGQTEAN 390
           QE   Q  +LN+ F     KV  +    ++LET+ + +  QK A SS   ++F  Q  A 
Sbjct: 88  QEESEQIKTLNNKFASFIDKVRFLEQQNKLLETKWTLLQEQKSAKSSRLPDIFEAQI-AG 146

Query: 391 PKSLINAIQLRDGKQLEDTIMKTKTIEGEIESEKQQGEKVI 431
            +  + A+Q+ DG +LE  +   +T++  +E  K + E  I
Sbjct: 147 LRGQLEALQV-DGGRLEQGL---RTMQDVVEDFKNKYEDEI 183


>YK16_SCHPO (Q9HDY4) Putative ATP-dependent RNA helicase PB1A10.06c
           (EC 3.6.1.-)
          Length = 1183

 Score = 33.9 bits (76), Expect = 1.0
 Identities = 23/80 (28%), Positives = 44/80 (54%), Gaps = 3/80 (3%)

Query: 297 QHTTPPVYANNERVPQKSSLEILLEKHAMEQSKQFQELKNQTGSLNDSFV--KLTSKVDS 354
           Q ++  V+AN E   Q S+ EIL++    E+ K+ QELK+Q    N+  +  K   ++D 
Sbjct: 35  QESSSEVHANPEPDNQDSNAEILIDVPKEERQKRKQELKDQLLKENEGSISSKKKKRLDK 94

Query: 355 IAIHTRMLETQISQVAQKVA 374
             I  ++ + +++ +  K+A
Sbjct: 95  Y-IENKLKKEEVASLIAKLA 113


>TPM1_YEAST (P17536) Tropomyosin 1
          Length = 199

 Score = 33.5 bits (75), Expect = 1.3
 Identities = 30/140 (21%), Positives = 59/140 (41%), Gaps = 15/140 (10%)

Query: 320 LEKHAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPT 379
           L+  A    ++++ELK +   L    V+  +++ S+ +  + LE +I ++   ++ S  T
Sbjct: 11  LKLEAESWQEKYEELKEKNKDLEQENVEKENQIKSLTVKNQQLEDEIEKLEAGLSDSKQT 70

Query: 380 -------------LEVFPGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGEIESEKQQ 426
                        L V   Q E   + L    +L + KQL +     ++       + QQ
Sbjct: 71  EQDNVEKENQIKSLTVKNHQLEEEIEKL--EAELAESKQLSEDSHHLQSNNDNFSKKNQQ 128

Query: 427 GEKVIGESDKPIVSPPYKLK 446
            E+ + ESD  +     KL+
Sbjct: 129 LEEDLEESDTKLKETTEKLR 148


>HOM1_RAT (Q9Z214) Homer protein homolog 1 (PSD-Zip45) (VASP/Ena
           related gene up-regulated during seizure and LTP)
          Length = 366

 Score = 33.5 bits (75), Expect = 1.3
 Identities = 27/124 (21%), Positives = 61/124 (48%), Gaps = 18/124 (14%)

Query: 325 MEQSKQFQELKNQTGSLNDSFVKLTSKVDSI--------AIHTRMLETQISQVAQKVATS 376
           +E +   ++ K Q  +  +   +L  +V  +        A+H+   +T++SQ  Q++   
Sbjct: 214 LESTANVKQWKQQLAAYQEEAERLHKRVTELECVSSQANAVHSH--KTELSQTVQEL--- 268

Query: 377 SPTLEVFPGQTEANPKSLINAIQLRDGK-----QLEDTIMKTKTIEGEIESEKQQGEKVI 431
             TL+V   + E   + + NA +L++ +     +L++  ++ K +EG++   +Q+ EK  
Sbjct: 269 EETLKVKEEEIERLKQEIDNARELQEQRDSLTQKLQEVEIRNKDLEGQLSELEQRLEKSQ 328

Query: 432 GESD 435
            E D
Sbjct: 329 SEQD 332


>YJH6_YEAST (P47035) Hypothetical 128.5 kDa protein in SCP160-SMC3
           intergenic region
          Length = 1189

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 28/109 (25%), Positives = 46/109 (41%), Gaps = 8/109 (7%)

Query: 311 PQKSSLEILLEKHAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVA 370
           P+KSSLE ++EK +  +     E K  T  L+D+ V+     +   +   +L T I    
Sbjct: 493 PRKSSLETIVEKKSQAEPSGIVEPKRMTNFLDDNQVREKEDTNDKLLEKEILPT-IPHND 551

Query: 371 QKVATSSPTLEVFPGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGE 419
           Q +  SS        ++    KSL   +   +    ED  +   TIE +
Sbjct: 552 QPILASS-------DKSNGTLKSLAGKVSSNNNASKEDGTIINGTIEDD 593


>SYS2_CLOAB (Q97N21) Seryl-tRNA synthetase 2 (EC 6.1.1.11)
           (Serine--tRNA ligase 2) (SerRS 2)
          Length = 425

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 27/91 (29%), Positives = 43/91 (46%), Gaps = 10/91 (10%)

Query: 306 NNERVPQKSSLEILLEKHAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQ 365
           ++ER      +E+L  K   E SKQ   +K+Q G +++SF K    +  I+     LET 
Sbjct: 34  DDERRKLIHEVEVLKNKKN-EASKQISNIKSQGGKVDESFFK---DIKEISNKISELETS 89

Query: 366 ISQVAQKVAT------SSPTLEVFPGQTEAN 390
           +  +  K+ T      + P  +V PG  E N
Sbjct: 90  LEPIKGKMDTFLEALPNIPDEDVLPGGKENN 120


>C190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)
            (Microtubule binding protein 190) (d-CLIP-190)
          Length = 1690

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 24/265 (9%)

Query: 176  KMNVDAAAGGALMNKTFTGAYDLIEDMAQNHYQWTSERVIADVTPPPSKKEAGMYQVS-- 233
            ++   AAA G   +KT    +D I  +        +E   +++    S  EA   Q+   
Sbjct: 840  QLQQQAAASGEEGSKTVAKLHDEISQLKSQ-----AEETQSELKSTQSNLEAKSKQLEAA 894

Query: 234  --TLDHLSTKVDTLLQKFDKLTVSVVTPALVSPPCEFCGILDHTGVECKLGRVAKSPDQN 291
              +L+  + K   LL++  KL   V         C       HT VE K  ++  +    
Sbjct: 895  NGSLEEEAKKSGHLLEQITKLKSEVGETQAALSSC-------HTDVESKTKQLEAANAAL 947

Query: 292  SYTFGQHTTPPVYANNERVPQKSSLEIL---LEKHAMEQSKQFQELKNQTGSLNDSFVKL 348
                 ++      A++ +   K   + L   L+      S    +L   +  +     +L
Sbjct: 948  EKVNKEYAESRAEASDLQDKVKEITDTLHAELQAERSSSSALHTKLSKFSDEIATGHKEL 1007

Query: 349  TSKVDSIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEANPKSLINAIQLRDGKQLED 408
            TSK D+ +      E ++ ++ Q++  S  +      + E   KS   +I     K L++
Sbjct: 1008 TSKADAWSQEMLQKEKELQELRQQLQDSQDSQTKLKAEGERKEKSFEESI-----KNLQE 1062

Query: 409  TIMKTKTIEGEIESEKQQGEKVIGE 433
             + K KT   E+ +  Q   K + E
Sbjct: 1063 EVTKAKTENLELSTGTQTTIKDLQE 1087


>ALSR_BACSU (Q04778) HTH-type transcriptional regulator alsR (Als
           operon regulatory protein)
          Length = 302

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 40/157 (25%), Positives = 63/157 (39%), Gaps = 13/157 (8%)

Query: 328 SKQFQELKNQTG----SLNDSFVKLTSKVDSIAIHTRMLETQISQ---VAQKVATSSPTL 380
           S+Q ++L+ + G         FV+LT+  +    H RM   QI Q   +AQ+ A     L
Sbjct: 33  SQQIKQLEEEVGVTLLKRTKRFVELTAAGEIFLNHCRMALMQIGQGIELAQRTARGEQGL 92

Query: 381 EVFPGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGEIESEKQQGEKVIGESDKPIVS 440
            V      A  + L   +     ++        K    EI S +QQ E + G  D  I+ 
Sbjct: 93  LVIGFVGSATYEFLPPIV-----REYRKKFPSVKIELREISSSRQQEELLKGNIDIGILH 147

Query: 441 PPYK-LKIHVPQRLAKPNFIVIESFSTPCVIESETIE 476
           PP +   +H+    + P  + +         ES TIE
Sbjct: 148 PPLQHTALHIETAQSSPCVLALPKQHPLTSKESITIE 184


>YCEH_BACSU (O34833) Hypothetical protein yceH
          Length = 363

 Score = 32.7 bits (73), Expect = 2.2
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%)

Query: 297 QHTTPPVYANNERVPQKSSLEILLEKHAMEQSKQFQE---LKNQTGSLN---DSFVKLTS 350
           ++  P V   NE + Q+ + +I L+     + K+  +   +KNQ   L    +  V+++ 
Sbjct: 4   ENQNPLVLDKNEEISQQKADDIRLQLRQEPEVKRLAQQIDVKNQMELLEYGKEPAVEISK 63

Query: 351 KVDSIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEANPKSLINAIQLRDGKQLEDTI 410
             D I     M  T ++     +      ++ F       PK L+  I  R G  +E   
Sbjct: 64  FSDRIL--GMMKTTSVTDSGTMLTQLGKIMDRFDKNDFDEPKGLMAKIFKRGGSMIEKIF 121

Query: 411 MKTKTIEGEIE 421
            K +T+ GEIE
Sbjct: 122 KKYQTLGGEIE 132


>TEK2_HUMAN (Q9UIF3) Tektin-2 (Testicular tektin) (Tektin-t)
           (Testicular tektin B1-like protein) (Tektin-B1) (TEKTB1)
          Length = 430

 Score = 32.7 bits (73), Expect = 2.2
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 306 NNERVPQKSSLEILLEKHAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIA--IHTRMLE 363
           NNE   Q+ + E    K   E  K + ELK Q  +  +   +L   +  +   + T++L 
Sbjct: 251 NNELEAQRVATEFAFRKRLREMEKVYSELKWQEKNTLEEIAELQEDIRHLEEDLRTKLLS 310

Query: 364 TQISQVAQKVATSSPTLEVFPGQTE 388
            ++S    +  T  P +E+   Q +
Sbjct: 311 LKLSHTRLEARTYRPNVELCRDQAQ 335


>Y321_MYCGE (P47563) Hypothetical lipoprotein MG321 precursor
          Length = 934

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 12/98 (12%)

Query: 12  ITSSDESYDAIVYPTVEGSKFEIK-----PALIYLVQQNQFFGSPTEDPNLHVSIFLRLS 66
           I  +DE+YD   Y +V+ +KF +      P  + ++ +  FF  P   P +  ++ L   
Sbjct: 251 IEITDENYDVENYRSVDDNKFNVYLTSPFPFFLSMMSKEFFFPIPHTHPKVK-ALKLGKD 309

Query: 67  GTLKANQEAVRLHLFPFSLRDRASAWFHSLQIGSITSW 104
             LK NQ   R       + D+A+  F  +  G + +W
Sbjct: 310 SPLKYNQNNNR------KILDQANTNFDGIYGGGVNAW 341


>KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen)
          Length = 1357

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 17/149 (11%)

Query: 290  QNSYTFGQHTTPPVYANNERVP----QKSSLEILLEKHAMEQSKQFQELKNQTGSLNDSF 345
            Q+S+T  +     + + N+ +     ++  LE+ LEK  ME+S    E++     L D  
Sbjct: 1179 QSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVR----ELKDLL 1234

Query: 346  VKLTSKVD---SIAI----HTRMLETQISQVAQKVATSSPTLEVFPGQTEANPKSLINAI 398
             +L  K+D   S A+       +L+ Q+++   K+ T     +   G      +SL   I
Sbjct: 1235 TELQKKLDDSYSEAVRQNEELNLLKAQLNETLTKLRTEQNERQKVAGDLHKAQQSL-ELI 1293

Query: 399  QLRDGKQLED-TIMKTKTIEGEIESEKQQ 426
            Q +  K   D T+++   +  E ES +++
Sbjct: 1294 QSKIVKAAGDTTVIENSDVSPETESSEKE 1322


>WTAP_MOUSE (Q9ER69) Wilms' tumor 1-associating protein
           (WT1-associated protein) (Putative pre-mRNA splicing
           regulator female-lethal(2D) homolog)
          Length = 396

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 320 LEKHAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVA 374
           LE     Q K  +ELK+    LND  ++L  +V+ +     +L+ Q+ +  Q++A
Sbjct: 183 LEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLA 237


>WTAP_HUMAN (Q15007) Wilms' tumor 1-associating protein
           (WT1-associated protein) (Putative pre-mRNA splicing
           regulator female-lethal(2D) homolog)
          Length = 396

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 320 LEKHAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVA 374
           LE     Q K  +ELK+    LND  ++L  +V+ +     +L+ Q+ +  Q++A
Sbjct: 183 LEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLA 237


>STAR_XENLA (Q9DG08) Steroidogenic acute regulatory protein (StAR)
           (StARD1) (Fragment)
          Length = 289

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 16/128 (12%)

Query: 331 FQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEAN 390
           ++ L+N TG    + V LT +++ +A+        I+Q+ +K    S  LE         
Sbjct: 18  YRHLRNMTGLRRTAAVALTHELEKLALVGPGPGKWINQIRRKSILLSSRLE--------- 68

Query: 391 PKSLINAIQLRDGKQLEDTIMKTKTIEGEIESEK-----QQGEKVIGESDKPIVSPPYKL 445
            +  +N +++   KQ E+ + K+  I G+ +  K     + G+KV+ +   P +   +KL
Sbjct: 69  -EKTLNDVEMSYIKQGEEALKKSLNILGDQDGWKTEIVMENGDKVLSKV-LPDIGKVFKL 126

Query: 446 KIHVPQRL 453
           +  V + L
Sbjct: 127 EAVVEKPL 134


>RA50_AQUAE (O67124) Probable DNA double-strand break repair rad50
           ATPase
          Length = 978

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 22/116 (18%), Positives = 50/116 (42%), Gaps = 8/116 (6%)

Query: 320 LEKHAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPT 379
           +E+   +  K F+EL ++   L      L   ++S+    +    +++ + +   +    
Sbjct: 655 IEEKEKKLRKHFEELSSRKSKLEGELSALNESINSLEEERKEKLKELANIYEVAKSPREV 714

Query: 380 LEVFPGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGEIESEKQQGEKVIGESD 435
           +E++ G  EA  +  I        K+ E++    K  + EIE + ++ E +   SD
Sbjct: 715 VELYLGDKEAELERKI--------KEFEESFQSLKLKKSEIEEKLKEYEGIRELSD 762


>NLFA_DROME (Q86NP2) Negative elongation factor A homolog
          Length = 1248

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 384  PGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGE-IESEKQQGEKVIGESDKPIVSPP 442
            P   +  P S +   Q + GKQ+  T++ T ++ G+ +  ++QQ   VIG S +  +  P
Sbjct: 959  PSLVKTTPSSGVQLQQQQSGKQILPTLIPTSSLGGQHVIVQQQQPTNVIGNSQQQTIIRP 1018


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.316    0.132    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,743,349
Number of Sequences: 164201
Number of extensions: 2358681
Number of successful extensions: 6551
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 6536
Number of HSP's gapped (non-prelim): 52
length of query: 500
length of database: 59,974,054
effective HSP length: 114
effective length of query: 386
effective length of database: 41,255,140
effective search space: 15924484040
effective search space used: 15924484040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)


Medicago: description of AC139747.4