BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139743.4 - phase: 0 /pseudo
(105 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DAXX_MOUSE (O35613) Death domain-associated protein 6 (Daxx) 40 0.001
GA83_YEAST (Q04739) Glucose repression protein GAL83 (SPM1 protein) 36 0.019
YBE6_YEAST (P38193) Hypothetical 50.7 kDa protein in SEC17-QCR1 ... 33 0.092
TRX_DROME (P20659) Trithorax protein 33 0.12
PIB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate phos... 32 0.21
PIB1_HUMAN (Q9NQ66) 1-phosphatidylinositol-4,5-bisphosphate phos... 32 0.21
PIB1_BOVIN (P10894) 1-phosphatidylinositol-4,5-bisphosphate phos... 32 0.21
NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2 (Up-f... 32 0.21
YEMA_DROME (P25992) Yemanuclein-alpha 32 0.27
UBPA_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC... 32 0.27
SWR1_YEAST (Q05471) Helicase SWR1 32 0.27
PESC_BRARE (P79741) Pescadillo 32 0.27
SPEN_DROME (Q8SX83) Split ends protein 32 0.35
MYC2_CYPCA (Q90342) Myc II protein (C-MYC II) 32 0.35
FKB4_DROME (P54397) 39 kDa FK506-binding nuclear protein (EC 5.2... 32 0.35
PIB1_RAT (P10687) 1-phosphatidylinositol-4,5-bisphosphate phosph... 31 0.46
VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 backgrou... 31 0.60
YB95_ARATH (Q8W487) Protein At2g39795, mitochondrial precursor 30 0.78
PLS_STAAU (P80544) Surface protein precursor (Plasmin-sensitive ... 30 0.78
NUCL_HUMAN (P19338) Nucleolin (Protein C23) 30 0.78
>DAXX_MOUSE (O35613) Death domain-associated protein 6 (Daxx)
Length = 739
Score = 39.7 bits (91), Expect = 0.001
Identities = 28/95 (29%), Positives = 42/95 (43%), Gaps = 13/95 (13%)
Query: 1 MELETVAFKRVGSRTSVLFDAPRDHDDDQG-------------KVCSTTSSSSIGRNSDD 47
M+ +T +R R +L AP+ D Q + C TTS + + DD
Sbjct: 388 MQDKTEEGERQKRRARLLGTAPQPSDPPQASSESGEGPSGMASQECPTTSKAETDDDDDD 447
Query: 48 DDDDEVSSERSMDENEAESKYNGGALDCMEALEEV 82
DDDD+ +E S +E E E + D E LE++
Sbjct: 448 DDDDDEDNEESEEEEEEEEEEKEATEDEDEDLEQL 482
>GA83_YEAST (Q04739) Glucose repression protein GAL83 (SPM1 protein)
Length = 417
Score = 35.8 bits (81), Expect = 0.019
Identities = 27/88 (30%), Positives = 41/88 (45%), Gaps = 7/88 (7%)
Query: 14 RTSVLFDAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEA---ESKYNG 70
++S++F+ D DDD+ S + + G D DDD + SS S+D NE ++ G
Sbjct: 63 KSSLIFN---DDDDDEIPPYSNHAENGSGETFDSDDDIDASSSSSIDSNEGDIHDADMTG 119
Query: 71 GALDCMEALEEVLPIRL-FQSFMVMQEK 97
L M+ P L Q F QE+
Sbjct: 120 NTLQKMDYQPSQQPDSLQNQGFQQQQEQ 147
>YBE6_YEAST (P38193) Hypothetical 50.7 kDa protein in SEC17-QCR1
intergenic region
Length = 441
Score = 33.5 bits (75), Expect = 0.092
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 24 DHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNGGALD 74
D+ D++G+ C + + + + DDDD+D+ E DE++ + + G D
Sbjct: 245 DNSDNKGQNCQSDVTKNNSDDEDDDDNDDDYREDGADEDDEDDDHMGSTDD 295
Score = 26.9 bits (58), Expect = 8.6
Identities = 14/51 (27%), Positives = 25/51 (48%), Gaps = 1/51 (1%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNG 70
D +++ DD+ + G + DD+DDD + S DE++ E + G
Sbjct: 257 DVTKNNSDDEDDDDNDDDYREDGADEDDEDDDHMGSTDD-DEDDDEDRQAG 306
>TRX_DROME (P20659) Trithorax protein
Length = 3726
Score = 33.1 bits (74), Expect = 0.12
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 19 FDAPRDHDDDQGKVCSTTSSSSIGRNS-----DDDDDDEVSSERSMDENE 63
F AP D DD+ G S N+ DDDDDDE + E +E++
Sbjct: 533 FGAPMDEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDQNEDD 582
>PIB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase beta 1 (EC 3.1.4.11) (Phosphoinositide
phospholipase C) (PLC-beta-1) (Phospholipase C-beta-1)
(PLC-I) (PLC-154)
Length = 1216
Score = 32.3 bits (72), Expect = 0.21
Identities = 21/68 (30%), Positives = 33/68 (47%), Gaps = 2/68 (2%)
Query: 34 STTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNGGALDCMEALEEVLPIRLFQSFMV 93
S+ + SDDDDDD+ + SMDE A S+ A + M L + F+SF +
Sbjct: 500 SSPGAGEADTESDDDDDDDDCKKSSMDEGTAGSE--AMATEEMSNLVNYIQPVKFESFEI 557
Query: 94 MQEKYLKF 101
+++ F
Sbjct: 558 SKKRNKSF 565
>PIB1_HUMAN (Q9NQ66) 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase beta 1 (EC 3.1.4.11) (Phosphoinositide
phospholipase C) (PLC-beta-1) (Phospholipase C-beta-1)
(PLC-I) (PLC-154)
Length = 1216
Score = 32.3 bits (72), Expect = 0.21
Identities = 21/68 (30%), Positives = 33/68 (47%), Gaps = 2/68 (2%)
Query: 34 STTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNGGALDCMEALEEVLPIRLFQSFMV 93
S+ + SDDDDDD+ + SMDE A S+ A + M L + F+SF +
Sbjct: 500 SSPGAGEADTESDDDDDDDDCKKSSMDEGTAGSE--AMATEEMSNLVNYIQPVKFESFEI 557
Query: 94 MQEKYLKF 101
+++ F
Sbjct: 558 SKKRNKSF 565
>PIB1_BOVIN (P10894) 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase beta 1 (EC 3.1.4.11) (Phosphoinositide
phospholipase C) (PLC-beta-1) (Phospholipase C-beta-1)
(PLC-I) (PLC-154)
Length = 1216
Score = 32.3 bits (72), Expect = 0.21
Identities = 21/68 (30%), Positives = 33/68 (47%), Gaps = 2/68 (2%)
Query: 34 STTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNGGALDCMEALEEVLPIRLFQSFMV 93
S+ + SDDDDDD+ + SMDE A S+ A + M L + F+SF +
Sbjct: 500 SSPGAGEADTESDDDDDDDDCKKSSMDEGTAGSE--AMATEEMSNLVNYIQPVKFESFEI 557
Query: 94 MQEKYLKF 101
+++ F
Sbjct: 558 SKKRNRSF 565
>NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2
(Up-frameshift suppressor 2)
Length = 1089
Score = 32.3 bits (72), Expect = 0.21
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNGGALDCMEAL 79
D D DDD + D+DDDDE + ++++++ +Y GG LD +
Sbjct: 891 DEDDDEDDDDDDDDDDDDGEEGDEDDDEDDDDEDDDDEEEEDSDSDLEY-GGDLDADRDI 949
Query: 80 E 80
E
Sbjct: 950 E 950
>YEMA_DROME (P25992) Yemanuclein-alpha
Length = 1002
Score = 32.0 bits (71), Expect = 0.27
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 1 MELETVAFKRVGSRTSVLFDAPRDHDDDQGKVCSTTSSSSIGRNSDDDD-----DDEVSS 55
+E + + K +RT + P S +SSSS G + ++DD DDE S
Sbjct: 177 LEFKNLTKKSYTTRTDAIIKMPERSRKRMVSSSSESSSSSSGDDDENDDGNNEEDDESDS 236
Query: 56 ERSMDENEAESKYNGGALDCME 77
E +EN+ + + +E
Sbjct: 237 EDDSEENDESDSEDDSESESLE 258
>UBPA_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC
3.1.2.15) (Ubiquitin thiolesterase 10)
(Ubiquitin-specific processing protease 10)
(Deubiquitinating enzyme 10) (Disrupter of telomere
silencing protein 4)
Length = 792
Score = 32.0 bits (71), Expect = 0.27
Identities = 20/90 (22%), Positives = 43/90 (47%)
Query: 9 KRVGSRTSVLFDAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESKY 68
+ +GS + + D+ +++ ++ K ST+ SS D+D+DD +M++ E +
Sbjct: 196 ENLGSPLATIDDSSNENEKEKRKELSTSISSDDEIEDDEDEDDMDYDSSAMEKELPEEEE 255
Query: 69 NGGALDCMEALEEVLPIRLFQSFMVMQEKY 98
N + E ++ L L ++ V +Y
Sbjct: 256 NDSSSKISEGEKKSLYQDLMENSTVEVNRY 285
>SWR1_YEAST (Q05471) Helicase SWR1
Length = 1514
Score = 32.0 bits (71), Expect = 0.27
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 14 RTSVLFDAPRDHDDDQGKVCSTTSSSS-IGRNSDDDDDDEVSSERSMDENEAESKYNGGA 72
+++ L +A + +D G+ + +S S+ + SDDD DDE+S+ S DE+E G
Sbjct: 454 KSTQLLEAQLNQVNDDGRSSTPSSDSNDVLSESDDDMDDELST--SSDEDEEVDADVG-- 509
Query: 73 LDCMEALEEVLPIRLFQSFMVMQEKYLKF 101
L+ A E P + + ++EKY F
Sbjct: 510 LENSPASTEATPTDESLNLIQLKEKYGHF 538
>PESC_BRARE (P79741) Pescadillo
Length = 582
Score = 32.0 bits (71), Expect = 0.27
Identities = 13/28 (46%), Positives = 18/28 (63%)
Query: 42 GRNSDDDDDDEVSSERSMDENEAESKYN 69
G +DD++DE E+S DE EAE + N
Sbjct: 462 GEEEEDDEEDEEDDEQSEDEEEAEEEAN 489
>SPEN_DROME (Q8SX83) Split ends protein
Length = 5560
Score = 31.6 bits (70), Expect = 0.35
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 10 RVGSRTSVLFDAPRDHDDDQGKVCSTTSSSSIGR-----NSDDDDDDEVSSERSMDENEA 64
R + S +D D + + + ++ SSS GR +SDDDDD+E R +++A
Sbjct: 2463 RAKKKRSTSYDGDSDTEFEDRQHRNSGSSSFHGRYPGLSSSDDDDDEETHQRRISSDSDA 2522
Query: 65 E 65
E
Sbjct: 2523 E 2523
>MYC2_CYPCA (Q90342) Myc II protein (C-MYC II)
Length = 401
Score = 31.6 bits (70), Expect = 0.35
Identities = 22/76 (28%), Positives = 35/76 (45%), Gaps = 12/76 (15%)
Query: 2 ELETVAFKRVGSRTSVLFDAPRDHDDDQGKVCST----------TSSSSIGRNSDDDDDD 51
+L T A + +G SV+F P KV + SSSS G +S+D++++
Sbjct: 155 DLSTSASECIGP--SVVFPYPLTESSKSSKVAPSEPMLVLDTPPNSSSSSGSDSEDEEEE 212
Query: 52 EVSSERSMDENEAESK 67
E E +E E E +
Sbjct: 213 EEEEEEEEEEEEEEEE 228
>FKB4_DROME (P54397) 39 kDa FK506-binding nuclear protein (EC
5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase)
(Rotamase)
Length = 357
Score = 31.6 bits (70), Expect = 0.35
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSI--GRNSDDDDDDEVSSERSMDENEAESK 67
D+ D DDDQ + + +S +I + S+DD+D+ S E ++ + +S+
Sbjct: 91 DSEDDEDDDQMTIENLLNSKAIKNSKKSEDDEDENESGEEDEEDTDDDSQ 140
Score = 28.1 bits (61), Expect = 3.9
Identities = 17/43 (39%), Positives = 22/43 (50%), Gaps = 1/43 (2%)
Query: 24 DHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAES 66
D DDD + S G DDDD DE +E S +E+E +S
Sbjct: 134 DTDDDSQIIEEYESFLENGEEEDDDDVDE-DNEESGEEDEQDS 175
>PIB1_RAT (P10687) 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase beta 1 (EC 3.1.4.11) (Phosphoinositide
phospholipase C) (PLC-beta-1) (Phospholipase C-beta-1)
(PLC-I) (PLC-154)
Length = 1216
Score = 31.2 bits (69), Expect = 0.46
Identities = 21/68 (30%), Positives = 32/68 (46%), Gaps = 2/68 (2%)
Query: 34 STTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNGGALDCMEALEEVLPIRLFQSFMV 93
S+ + SDDDDDD+ + SMDE A S+ A + M L + F+SF
Sbjct: 500 SSPGAGEADTESDDDDDDDDCKKSSMDEGTAGSE--AMATEEMSNLVNYIQPVKFESFET 557
Query: 94 MQEKYLKF 101
+++ F
Sbjct: 558 SKKRNKSF 565
>VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 background
protein 3)
Length = 674
Score = 30.8 bits (68), Expect = 0.60
Identities = 16/54 (29%), Positives = 23/54 (41%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNGGAL 73
D D DDD + DDDDDD+ E +++E + K + G L
Sbjct: 618 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDEDEDEDDEGKKKEDKGGL 671
Score = 27.3 bits (59), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENE 63
D D +DD K + T + DDDDDD+ + D+++
Sbjct: 584 DEDNDEEDDNKK--NDTGGKDEDNDDDDDDDDDDDDDDDDDDDD 625
Score = 26.9 bits (58), Expect = 8.6
Identities = 11/54 (20%), Positives = 26/54 (47%)
Query: 10 RVGSRTSVLFDAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENE 63
++G V + D+D + + + G++ D+DDDD+ + D+++
Sbjct: 568 KLGGYPDVSAGKEEEEDEDNDEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDD 621
>YB95_ARATH (Q8W487) Protein At2g39795, mitochondrial precursor
Length = 250
Score = 30.4 bits (67), Expect = 0.78
Identities = 22/63 (34%), Positives = 33/63 (51%), Gaps = 3/63 (4%)
Query: 23 RDHDDDQGKVCSTTSSSSIGRNSDDDDDDE-VSSERSMDENEAESKYNGGALD--CMEAL 79
RD++ + KV + S N DDDDDDE S+E S+ +K +G L+ CM
Sbjct: 110 RDYNGEHIKVVVSMPSLVSDENDDDDDDDEGPSNESSIPLVVTVTKKSGLTLEFSCMAFP 169
Query: 80 EEV 82
+E+
Sbjct: 170 DEI 172
>PLS_STAAU (P80544) Surface protein precursor (Plasmin-sensitive
surface protein) (230 kDa cell-wall protein)
Length = 1637
Score = 30.4 bits (67), Expect = 0.78
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESKYNGGAL 73
DA D D D + S S ++D D D + S+ D N+ K N L
Sbjct: 1545 DADSDSDADSDSDSDSDSDSDSDSDADSDSDSDSDSDADRDHNDKTDKPNNKEL 1598
Score = 28.1 bits (61), Expect = 3.9
Identities = 15/54 (27%), Positives = 25/54 (45%), Gaps = 1/54 (1%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMD-ENEAESKYNGGA 72
D+ D D D + S S +SD D D + S+ D +++A+S + A
Sbjct: 1325 DSDADSDSDSDSDSDSDSDSDADSDSDSDSDSDADSDSDADSDSDADSDSDSDA 1378
Score = 27.7 bits (60), Expect = 5.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDEN 62
DA D D D + S S +SD D D + S+ D +
Sbjct: 1377 DADSDSDSDADSDSDSDSDSDADSDSDSDSDSDADSDSDADSD 1419
Score = 27.7 bits (60), Expect = 5.1
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMD-ENEAES 66
D+ D D D + S S +SD D D + S+ D +++A+S
Sbjct: 1365 DSDSDADSDSDSDADSDSDSDADSDSDSDSDSDADSDSDSDSDSDADS 1412
Score = 27.3 bits (59), Expect = 6.6
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMD-ENEAES 66
D+ D D D S S +SD D D + S+ D +++A+S
Sbjct: 1395 DSDADSDSDSDSDSDADSDSDADSDSDSDSDSDADSDSDSDSDSDADS 1442
Score = 27.3 bits (59), Expect = 6.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMD---ENEAES 66
DA D D D + S S +SD D D + S+ D +++A+S
Sbjct: 1487 DADSDSDSDSDSDADSDSDSDSDSDSDADSDSDADSDSDSDADSDSDADS 1536
Score = 27.3 bits (59), Expect = 6.6
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMD-ENEAES 66
D+ D D D + S S +SD D D + S+ D +++A+S
Sbjct: 1407 DSDADSDSDADSDSDSDSDSDADSDSDSDSDSDADSDSDADSDSDADS 1454
Score = 26.9 bits (58), Expect = 8.6
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMD-ENEAES 66
D+ D D D S S +SD D D + S+ D +++A+S
Sbjct: 1437 DSDADSDSDADSDSDADSDSDADSDSDSDSDSDADSDSDADSDSDADS 1484
Score = 26.9 bits (58), Expect = 8.6
Identities = 14/51 (27%), Positives = 23/51 (44%), Gaps = 1/51 (1%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMD-ENEAESKYN 69
D+ D D D S S +SD D D + S+ D +++A+ +N
Sbjct: 1537 DSDADGDSDADSDSDADSDSDSDSDSDSDSDSDADSDSDSDSDSDADRDHN 1587
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)
Length = 706
Score = 30.4 bits (67), Expect = 0.78
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 20 DAPRDHDDDQGKVCSTTSSSSIGRNSDDDDDDEVSSERSMDENEAESK 67
D D D+D+ + + ++++ + D+DD+D+ E D+ E +S+
Sbjct: 159 DEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSE 206
Score = 26.9 bits (58), Expect = 8.6
Identities = 12/49 (24%), Positives = 26/49 (52%), Gaps = 6/49 (12%)
Query: 24 DHDDDQGKV------CSTTSSSSIGRNSDDDDDDEVSSERSMDENEAES 66
D D+D+ ++ + + +S + +DD+DDE + D++E E+
Sbjct: 161 DEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEA 209
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.312 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,081,851
Number of Sequences: 164201
Number of extensions: 455629
Number of successful extensions: 4067
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 3006
Number of HSP's gapped (non-prelim): 668
length of query: 105
length of database: 59,974,054
effective HSP length: 81
effective length of query: 24
effective length of database: 46,673,773
effective search space: 1120170552
effective search space used: 1120170552
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC139743.4