BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139525.10 + phase: 0
(125 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ARG7_PHAAU (P32295) Indole-3-acetic acid induced protein ARG7 66 1e-11
AX6B_SOYBN (P33083) Auxin-induced protein 6B 64 6e-11
AX15_SOYBN (P33081) Auxin-induced protein 15A 63 1e-10
AXX1_SOYBN (P33082) Auxin-induced protein X15 62 2e-10
AXA5_SOYBN (P33079) Auxin-induced protein 10A5 60 1e-09
AX10_SOYBN (P33080) Auxin-induced protein X10A 60 1e-09
SNAT_SHEEP (Q29495) Serotonin N-acetyltransferase (EC 2.3.1.87) ... 33 0.15
SNAT_MACMU (O97756) Serotonin N-acetyltransferase (EC 2.3.1.87) ... 32 0.19
AROK_CHLPN (Q9Z6M1) Shikimate kinase (EC 2.7.1.71) (SK) 30 0.73
SACS_MOUSE (Q9JLC8) Sacsin 30 0.95
Y043_BORBU (O51072) Hypothetical protein BB0043 30 1.2
SNAT_RAT (Q64666) Serotonin N-acetyltransferase (EC 2.3.1.87) (A... 29 1.6
SNAT_BOVIN (O02785) Serotonin N-acetyltransferase (EC 2.3.1.87) ... 29 2.1
SACS_HUMAN (Q9NZJ4) Sacsin 29 2.1
NUGM_HUMAN (O75489) NADH-ubiquinone oxidoreductase 30 kDa subuni... 28 3.6
NUGM_BOVIN (P23709) NADH-ubiquinone oxidoreductase 30 kDa subuni... 28 3.6
CTN2_CHICK (P30997) Alpha-2 catenin (Alpha N-catenin) (Neural al... 28 4.7
RSC4_YEAST (Q02206) Chromatin structure remodeling complex prote... 27 6.2
NUGM_MOUSE (Q9DCT2) NADH-ubiquinone oxidoreductase 30 kDa subuni... 27 6.2
MUTS_BUCAI (P57504) DNA mismatch repair protein mutS 27 6.2
>ARG7_PHAAU (P32295) Indole-3-acetic acid induced protein ARG7
Length = 92
Score = 66.2 bits (160), Expect = 1e-11
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 7 KNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGF-NKSGP 65
+N S K L D P+G+LAV VGE +RFVI +LN P+ Q+LL QA E +G+ + G
Sbjct: 15 RNEASSKVL--DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGG 72
Query: 66 LSIPCDEFLFEDI 78
L+IPC E LF+ I
Sbjct: 73 LTIPCSEDLFQHI 85
>AX6B_SOYBN (P33083) Auxin-induced protein 6B
Length = 90
Score = 63.9 bits (154), Expect = 6e-11
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 8 NACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGF-NKSGPL 66
N S K + DV +G+LAV VGE RRFVI YLN P Q+LL QA E +G+ + +G L
Sbjct: 16 NQASSKAV--DVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGL 73
Query: 67 SIPCDEFLFEDI 78
+IPC E +F+ I
Sbjct: 74 TIPCSEDVFQHI 85
>AX15_SOYBN (P33081) Auxin-induced protein 15A
Length = 82
Score = 62.8 bits (151), Expect = 1e-10
Identities = 32/63 (50%), Positives = 43/63 (67%), Gaps = 1/63 (1%)
Query: 17 SDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGF-NKSGPLSIPCDEFLF 75
+D P+G+LAV VGE +RFVI YLN P Q+LL QA E +G+ + G L+IPC E +F
Sbjct: 15 ADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVF 74
Query: 76 EDI 78
+ I
Sbjct: 75 QCI 77
>AXX1_SOYBN (P33082) Auxin-induced protein X15
Length = 82
Score = 62.4 bits (150), Expect = 2e-10
Identities = 32/66 (48%), Positives = 43/66 (64%), Gaps = 1/66 (1%)
Query: 18 DVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGF-NKSGPLSIPCDEFLFE 76
D P+G+LAV VGE +RFVI Y+N P Q+LL QA E +G+ + G L+IPC E +F+
Sbjct: 16 DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75
Query: 77 DILLSL 82
I L
Sbjct: 76 RITCCL 81
>AXA5_SOYBN (P33079) Auxin-induced protein 10A5
Length = 93
Score = 59.7 bits (143), Expect = 1e-09
Identities = 32/66 (48%), Positives = 41/66 (61%), Gaps = 1/66 (1%)
Query: 18 DVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGF-NKSGPLSIPCDEFLFE 76
DVP+G+ AV VG+ RRF I YLN P QELL QA E +G+ + G L+IPC E F
Sbjct: 25 DVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFL 84
Query: 77 DILLSL 82
++ L
Sbjct: 85 NVTAHL 90
>AX10_SOYBN (P33080) Auxin-induced protein X10A
Length = 92
Score = 59.7 bits (143), Expect = 1e-09
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 8 NACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGF-NKSGPL 66
N S K + +VP+G+L V VG+ RRF+I YLN P Q+LL+QA E +G+ + G L
Sbjct: 16 NQASSKSV--EVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGL 73
Query: 67 SIPC--DEFL 74
+IPC DEFL
Sbjct: 74 TIPCKEDEFL 83
>SNAT_SHEEP (Q29495) Serotonin N-acetyltransferase (EC 2.3.1.87)
(Aralkylamine N-acetyltransferase) (AA-NAT) (Serotonin
acetylase)
Length = 207
Score = 32.7 bits (73), Expect = 0.15
Identities = 28/108 (25%), Positives = 47/108 (42%), Gaps = 19/108 (17%)
Query: 4 MWRKNACSGKKLPSDVPRGH------LAV--TVGETNRRFVIRADYLNHPVLQELLDQA- 54
+W + + + L PRGH LAV + + + V+ YL+H Q + +A
Sbjct: 98 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 157
Query: 55 ----------YEGYGFNKSGPLSIPCDEFLFEDILLSLGGGTVARRSS 92
Y+ +GF+ +GP +I F ++ SL G RR+S
Sbjct: 158 LMCEDALVPFYQRFGFHPAGPCAIVVGSLTFTEMHCSLRGHAALRRNS 205
>SNAT_MACMU (O97756) Serotonin N-acetyltransferase (EC 2.3.1.87)
(Aralkylamine N-acetyltransferase) (AA-NAT) (Serotonin
acetylase)
Length = 204
Score = 32.3 bits (72), Expect = 0.19
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 19/108 (17%)
Query: 4 MWRKNACSGKKLPSDVPRGHLA--------VTVGETNRRFVIRADYLNHPVLQELLDQA- 54
+W K+ + L P GH+A + R ++ YL+H Q + +A
Sbjct: 95 LWDKDRLMQESLTMHRPGGHIAHLHVLAVHCAFRQQGRGPILLWRYLHHLGSQPAVHRAA 154
Query: 55 ----------YEGYGFNKSGPLSIPCDEFLFEDILLSLGGGTVARRSS 92
YE +GF+ GP +I F ++ SL G RR+S
Sbjct: 155 LMCEDALVPFYERFGFHAMGPCAITVGSLSFTELHCSLQGHPFLRRNS 202
>AROK_CHLPN (Q9Z6M1) Shikimate kinase (EC 2.7.1.71) (SK)
Length = 176
Score = 30.4 bits (67), Expect = 0.73
Identities = 21/61 (34%), Positives = 30/61 (48%), Gaps = 1/61 (1%)
Query: 53 QAYEGYGFNKSGPLSIPCDEFLF-EDILLSLGGGTVARRSSSPVLTKKLDLSFLKDAVPL 111
+ Y+ YG K E L ED L+SLGGGT+ +S + + L FL +PL
Sbjct: 49 EIYKAYGDQKFSECEARILETLPPEDALISLGGGTLMYEASYRAIQTRGALVFLSVELPL 108
Query: 112 L 112
+
Sbjct: 109 I 109
>SACS_MOUSE (Q9JLC8) Sacsin
Length = 3830
Score = 30.0 bits (66), Expect = 0.95
Identities = 24/64 (37%), Positives = 31/64 (47%), Gaps = 3/64 (4%)
Query: 11 SGKKLPSDVPRGH--LAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPLSI 68
S KKLP+DVP+ L +TV E + F AD L P+ + D + KSG
Sbjct: 995 SNKKLPTDVPKSSCILQITVEEFHHVFRRIAD-LQSPLFRGPDDDPATLFEMAKSGQSKK 1053
Query: 69 PCDE 72
P DE
Sbjct: 1054 PSDE 1057
>Y043_BORBU (O51072) Hypothetical protein BB0043
Length = 346
Score = 29.6 bits (65), Expect = 1.2
Identities = 13/40 (32%), Positives = 26/40 (64%), Gaps = 3/40 (7%)
Query: 80 LSLGGGTVARRSSSPVLTKKLDLSFLKD---AVPLLEAFD 116
L LGGG+++ +S ++ + L+LS++ D A+ LL ++
Sbjct: 146 LELGGGSISGATSKEIIVRALNLSYINDYKGAIDLLNKYN 185
>SNAT_RAT (Q64666) Serotonin N-acetyltransferase (EC 2.3.1.87)
(Aralkylamine N-acetyltransferase) (AA-NAT) (Serotonin
acetylase)
Length = 205
Score = 29.3 bits (64), Expect = 1.6
Identities = 29/108 (26%), Positives = 43/108 (38%), Gaps = 19/108 (17%)
Query: 4 MWRKNACSGKKLPSDVPRG---HLAV-----TVGETNRRFVIRADYLNHPVLQELLDQA- 54
+W K + + L P G HL V T + + V+ YL+H Q + +A
Sbjct: 96 LWDKERLTQESLTLHRPGGRTAHLHVLAVHRTFRQQGKGSVLLWRYLHHLGSQPAVRRAV 155
Query: 55 ----------YEGYGFNKSGPLSIPCDEFLFEDILLSLGGGTVARRSS 92
YE +GF GP +I F ++ SL T RR+S
Sbjct: 156 LMCENALVPFYEKFGFQAMGPCAITMGSLTFTELQCSLRCHTFLRRNS 203
>SNAT_BOVIN (O02785) Serotonin N-acetyltransferase (EC 2.3.1.87)
(Aralkylamine N-acetyltransferase) (AA-NAT) (Serotonin
acetylase)
Length = 207
Score = 28.9 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 24/45 (52%)
Query: 48 QELLDQAYEGYGFNKSGPLSIPCDEFLFEDILLSLGGGTVARRSS 92
++ L Y+ +GF+ +GP ++ F ++ SL G RR+S
Sbjct: 161 EDALVPFYQRFGFHPAGPCAVVVGSLTFTEMHCSLRGHAALRRNS 205
>SACS_HUMAN (Q9NZJ4) Sacsin
Length = 3829
Score = 28.9 bits (63), Expect = 2.1
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 11 SGKKLPSDVPRGH--LAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPLSI 68
S KKLPSD P+ L +TV E + F AD L P+ + D + KSG
Sbjct: 995 SNKKLPSDEPKSSCILQITVEEFHHVFRRIAD-LQSPLFRGPDDDPAALFEMAKSGQSKK 1053
Query: 69 PCDE 72
P DE
Sbjct: 1054 PSDE 1057
>NUGM_HUMAN (O75489) NADH-ubiquinone oxidoreductase 30 kDa subunit,
mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
(Complex I-30KD) (CI-30KD)
Length = 264
Score = 28.1 bits (61), Expect = 3.6
Identities = 13/28 (46%), Positives = 18/28 (63%), Gaps = 1/28 (3%)
Query: 41 YLNHPVLQELL-DQAYEGYGFNKSGPLS 67
+ NHP L+ +L D +EG+ F K PLS
Sbjct: 178 FANHPDLRRILTDYGFEGHPFRKDFPLS 205
>NUGM_BOVIN (P23709) NADH-ubiquinone oxidoreductase 30 kDa subunit,
mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
(Complex I-30KD) (CI-30KD)
Length = 266
Score = 28.1 bits (61), Expect = 3.6
Identities = 13/28 (46%), Positives = 18/28 (63%), Gaps = 1/28 (3%)
Query: 41 YLNHPVLQELL-DQAYEGYGFNKSGPLS 67
+ NHP L+ +L D +EG+ F K PLS
Sbjct: 180 FANHPDLRRILTDYGFEGHPFRKDFPLS 207
>CTN2_CHICK (P30997) Alpha-2 catenin (Alpha N-catenin) (Neural
alpha-catenin)
Length = 906
Score = 27.7 bits (60), Expect = 4.7
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 27 TVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSG-PLSIPCDEFLFEDILLSLGGG 85
T + +R V LQ+LL + G + G PL+I D+ + L
Sbjct: 323 TRDDRRKRIVAECKRAVRQALQDLLSEYMNNTGRKEKGDPLNIAIDKMTKKTRDL----- 377
Query: 86 TVARRSSSPVLTKKLDLSFLKDAVPLLEAFDSKRSNNYK 124
RR + + SFL+ VPLL ++ +S N K
Sbjct: 378 ---RRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEK 413
>RSC4_YEAST (Q02206) Chromatin structure remodeling complex protein
RSC4 (Remodel the structure of chromatin complex subunit
RSC4)
Length = 625
Score = 27.3 bits (59), Expect = 6.2
Identities = 14/49 (28%), Positives = 26/49 (52%), Gaps = 3/49 (6%)
Query: 40 DYLNHPVLQELLDQAYEGYGFNKSGPLSIPCDEFLFEDILLSLGGGTVA 88
+Y N+ + +E + + N+ G +++ D+F FE+ L GGG A
Sbjct: 283 NYFNYLIQKEFFPELQD---LNERGEINLEFDKFEFENYLAIGGGGPAA 328
>NUGM_MOUSE (Q9DCT2) NADH-ubiquinone oxidoreductase 30 kDa subunit,
mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
(Complex I-30KD) (CI-30KD)
Length = 263
Score = 27.3 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 18/28 (63%), Gaps = 1/28 (3%)
Query: 41 YLNHPVLQELL-DQAYEGYGFNKSGPLS 67
+ NHP L+ +L D +EG+ F K PL+
Sbjct: 177 FFNHPDLRRILTDYGFEGHPFRKDFPLT 204
>MUTS_BUCAI (P57504) DNA mismatch repair protein mutS
Length = 802
Score = 27.3 bits (59), Expect = 6.2
Identities = 10/39 (25%), Positives = 24/39 (60%)
Query: 77 DILLSLGGGTVARRSSSPVLTKKLDLSFLKDAVPLLEAF 115
D+L++L ++ + P++++K +S L+ P++E F
Sbjct: 556 DVLVNLSERAISLNYTRPIMSEKYGISLLESRHPVVECF 594
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.138 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,609,980
Number of Sequences: 164201
Number of extensions: 630035
Number of successful extensions: 1294
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1277
Number of HSP's gapped (non-prelim): 22
length of query: 125
length of database: 59,974,054
effective HSP length: 101
effective length of query: 24
effective length of database: 43,389,753
effective search space: 1041354072
effective search space used: 1041354072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC139525.10