BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138580.2 + phase: 0
(557 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 74 1e-12
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13... 56 3e-07
YEQ7_YEAST (P40050) Hypothetical 79.5 kDa protein in PTP3-SER3 i... 46 2e-04
YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR... 40 0.012
PT09_YEAST (P32522) PET309 protein, mitochondrial precursor 39 0.036
POLB_MAIZE (P15718) Retrovirus-related Pol polyprotein from tran... 38 0.079
SR54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54) 34 0.88
MSN5_YEAST (P52918) MSN5 protein 34 0.88
GLNA_BUTFI (Q05650) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 34 0.88
Y391_HUMAN (O15091) Hypothetical protein KIAA0391 34 1.1
IMA2_HUMAN (P52292) Importin alpha-2 subunit (Karyopherin alpha-... 34 1.1
NPD_VIBCH (Q9KRX4) NAD-dependent deacetylase (EC 3.5.1.-) (Regul... 33 1.5
IMA2_MOUSE (P52293) Importin alpha-2 subunit (Karyopherin alpha-... 33 1.5
CND3_YEAST (Q06680) Condensin complex subunit 3 (CAPG homolog) 33 2.0
PPIA_SALTY (P20753) Peptidyl-prolyl cis-trans isomerase A precur... 33 2.6
ISPG_MYCGA (Q7NBH3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ... 32 3.3
DNAA_MYCGE (P35888) Chromosomal replication initiator protein dnaA 32 3.3
NPD_VIBPA (Q87PH8) NAD-dependent deacetylase (EC 3.5.1.-) (Regul... 32 4.4
GL34_ARATH (Q9FLT3) Putative germin-like protein subfamily 3 mem... 32 4.4
RPM2_YEAST (Q02773) Ribonuclease P protein component, mitochondr... 32 5.7
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/306 (21%), Positives = 136/306 (44%), Gaps = 15/306 (4%)
Query: 48 DEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFT 107
D+ ++ F H N P + +N +LS L +A+ + L Q+M+ +G++ T
Sbjct: 905 DDATTALNIFEETKRH-NVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVT 963
Query: 108 FNILINCFSQLGLNSLSFSVFGKILKK-GFDPNAITFNTLIK-GLCLKGHIHQALNFHDK 165
+ +IN ++G SL+ +F ++ + + P +NT+I+ + + +AL ++++
Sbjct: 964 YGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNR 1023
Query: 166 VVAQGFHLDQVSYGTLINGL-----CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNM 220
+ A +Y L++ VG + A L+L++R D ++ + Y I+ N+
Sbjct: 1024 LCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNV 1083
Query: 221 CKAKLVNDAFDLYSQMVAK----RISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENI 276
V A Y +AK I D S I ++ E + ++ M N+
Sbjct: 1084 VSD--VQAATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNV 1141
Query: 277 NPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDII-LDVVTYNSLMDGYCLVKEINKAK 335
+ Y + L+ F K G + +A+ + + + + TY +++ Y V + KA
Sbjct: 1142 SLNAYIVNALIKGFTKVGMISKARYYFDLLECEGMSGKEPSTYENMVRAYLSVNDGRKAM 1201
Query: 336 DIFDSM 341
+I + +
Sbjct: 1202 EIVEQL 1207
Score = 59.3 bits (142), Expect = 3e-08
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 333 KAKDIF-DSMASRGVIANVQSYTTMINGLCKIKMVDEA---VNLFEEMRCRKIIPNVVTY 388
K+ ++F D+M G I ++ +IN + D+A +N+FEE + + P+V Y
Sbjct: 870 KSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLY 929
Query: 389 NSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKD 448
N+++ LG+ + + KL EM + G P +TY ++++A C+ A L +++
Sbjct: 930 NAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMEN 989
Query: 449 Q-GIRPDMYTYTVLIK 463
Q +P + Y +I+
Sbjct: 990 QPNYQPRVAPYNTMIQ 1005
Score = 58.2 bits (139), Expect = 6e-08
Identities = 78/389 (20%), Positives = 161/389 (41%), Gaps = 15/389 (3%)
Query: 72 QFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKI 131
+F+ + +KH +S + N ++ IL + F++ +S F K+
Sbjct: 822 RFDAVQRVFEHSKHLYRKISTKSLEKANWFMALILDAMILSSSFARQFKSSNLFCDNMKM 881
Query: 132 LKKGFDPNAITFNTLIKGLCLKGHIHQA---LNFHDKVVAQGFHLDQVSYGTLINGLCKV 188
L G+ P A TF LI +G A LN ++ Y +++ L +
Sbjct: 882 L--GYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRA 939
Query: 189 GRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK-RISPDDFT 247
R T +L + + + P +V Y +I+ C+ + A L+++M + P
Sbjct: 940 RRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAP 999
Query: 248 CNSLI-YGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAF--CKEGKVKEAKMMLG 304
N++I + M ++A+ +++ +I P +T+ +L+DA+ K V K +L
Sbjct: 1000 YNTMIQFEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLE 1059
Query: 305 VTMKKDIILDVVTYNSLMDGYC-LVKEINKAKDIFDSMASRGVIANVQS----YTTMING 359
+ + D+ + + Y + + +V ++ A + + ++ +Q + + I
Sbjct: 1060 LMERTDVPILSMHYAAYIHILGNVVSDVQAATSCYMNALAKHDAGEIQLDANLFQSQIES 1119
Query: 360 LCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQP-P 418
L + E + + +M+ + N N+LI G K+G IS D + G
Sbjct: 1120 LIANDRIVEGIQIVSDMKRYNVSLNAYIVNALIKGFTKVGMISKARYYFDLLECEGMSGK 1179
Query: 419 NIITYNSILDALCKNHHVDKAIALLTNLK 447
TY +++ A + KA+ ++ LK
Sbjct: 1180 EPSTYENMVRAYLSVNDGRKAMEIVEQLK 1208
Score = 55.1 bits (131), Expect = 5e-07
Identities = 76/412 (18%), Positives = 157/412 (37%), Gaps = 63/412 (15%)
Query: 203 GKLVQPNAVMYNMIIDNMCKAKLVNDAFD-----------LYSQMVAKRISPDDF----T 247
GKL++ N ++ + + N FD LY ++ K + ++
Sbjct: 796 GKLIETNKFLHPEVYPTLISVLSKNKRFDAVQRVFEHSKHLYRKISTKSLEKANWFMALI 855
Query: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGV-- 305
+++I Q K + M + PR TF+ L++ + G +A L +
Sbjct: 856 LDAMILSSSFARQFKSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFE 915
Query: 306 -TMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIK 364
T + ++ V YN+++ + + +F M G++ +Y T+IN C+I
Sbjct: 916 ETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIG 975
Query: 365 MVDEAVNLFEEMRCR-KIIPNVVTYNSLID-----------GLGKLGKI--------SCV 404
A LF EM + P V YN++I L ++ S
Sbjct: 976 DESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDIEPSSHT 1035
Query: 405 LKLVDEMHDRGQPPNIITYNSILDALCK------NHHVDKAIALLTNL------------ 446
KL+ + + +P N+ + ++L+ + + + H I +L N+
Sbjct: 1036 YKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNVVSDVQAATSCYM 1095
Query: 447 -----KDQG-IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGF 500
D G I+ D + I+ L + ++ + ++ D+ +L+ Y +I+GF
Sbjct: 1096 NALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNVSLNAYIVNALIKGF 1155
Query: 501 CVKGLFDAALALLSKMEDNGCI-PNAKTYEIVILSLFEKDENDMAEKLLREM 551
G+ A +E G TYE ++ + ++ A +++ ++
Sbjct: 1156 TKVGMISKARYYFDLLECEGMSGKEPSTYENMVRAYLSVNDGRKAMEIVEQL 1207
Score = 54.7 bits (130), Expect = 6e-07
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 371 NLF-EEMRCRKIIPNVVTYNSLIDGLGKLGKI---SCVLKLVDEMHDRGQPPNIITYNSI 426
NLF + M+ IP T+ LI+ + G + L + +E P++ YN++
Sbjct: 873 NLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAV 932
Query: 427 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVK-G 485
L L + + L +K+ G+ P TY +I C+ G A+K+F ++ +
Sbjct: 933 LSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPN 992
Query: 486 YNLDVYTYTVMIQGFCVKGLF--DAALALLSKMEDNGCIPNAKTYEIVI 532
Y V Y MIQ F V+ +F + AL +++ P++ TY++++
Sbjct: 993 YQPRVAPYNTMIQ-FEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLM 1040
Score = 32.0 bits (71), Expect = 4.4
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 51 NNLISSFNSL-LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFN 109
N+L SSF S+ L+ IQF K L+S + H L++ + + + +N
Sbjct: 163 NSLESSFASISLNSFTSANEFIQFLKRLASSKLSIH---TFDLYKLVRNSPELLTLEAYN 219
Query: 110 ILINCFSQLGLNSLSFSVFGKILKKGFD-------PNAITFNTLIKGLCLKG-HIHQAL 160
I++ C S S KI+K D PN TF T+I LC + +HQ +
Sbjct: 220 IVLQCMSTDDYFLSSSKNIQKIIKVYVDMLNSFISPNVTTFETVIFALCRRAKFVHQKI 278
>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
(Leucine-rich PPR-motif containing protein)
Length = 1273
Score = 55.8 bits (133), Expect = 3e-07
Identities = 33/146 (22%), Positives = 66/146 (44%)
Query: 406 KLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGL 465
++ D + G ++ YN++L +N + L +++ I+P+ TY LI
Sbjct: 27 RIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASY 86
Query: 466 CQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNA 525
C G +E A K+ + K + ++ ++ G G + A +L+ M D G P
Sbjct: 87 CNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGP 146
Query: 526 KTYEIVILSLFEKDENDMAEKLLREM 551
TY ++ + EK + D ++ L ++
Sbjct: 147 DTYLALLNAYAEKGDIDHVKQTLEKV 172
Score = 53.9 bits (128), Expect = 1e-06
Identities = 35/160 (21%), Positives = 69/160 (42%)
Query: 320 SLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCR 379
SL+ L + A I+D++ G + +V Y ++ + + + +M
Sbjct: 11 SLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEA 70
Query: 380 KIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKA 439
I PN VTY LI +G I K++ M + P +++++ + ++ A
Sbjct: 71 NIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENA 130
Query: 440 IALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFE 479
+LT ++D GI P TY L+ + G ++ ++ E
Sbjct: 131 ENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLE 170
Score = 49.7 bits (117), Expect = 2e-05
Identities = 25/109 (22%), Positives = 51/109 (45%)
Query: 268 LHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327
L KM NI P T+ L+ ++C G ++ A +LG KD+ + +++L+ G+
Sbjct: 64 LAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 123
Query: 328 VKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEM 376
++ A++I M G+ +Y ++N + +D E++
Sbjct: 124 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKV 172
Score = 47.0 bits (110), Expect = 1e-04
Identities = 62/339 (18%), Positives = 140/339 (41%), Gaps = 7/339 (2%)
Query: 213 YNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMI 272
YN ++ + + D ++M I P+ T LI +C +G ++ A +L M
Sbjct: 44 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 103
Query: 273 LENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEIN 332
+++ FS LV + G ++ A+ +L V I TY +L++ Y +I+
Sbjct: 104 TKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 163
Query: 333 KAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRC-RKIIPNVVTYNSL 391
K + + + + +I K + + +++ C R+ IP+ + L
Sbjct: 164 HVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGYLSMSQKFWKKFTCERRYIPDAMNLILL 223
Query: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI 451
+ KL ++ + L + + P++ + + N V+K LK+ +
Sbjct: 224 L-VTEKLEDVALQILLACPV-SKEDGPSVFGSFFLQHCVTMNTPVEKLTDYCKKLKEVQM 281
Query: 452 RPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALA 511
+T+ L + K + A+ + + + +G+ + + + ++ G + +
Sbjct: 282 HSFPLQFTLHCALL--ANKTDLAKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNVQGIIE 339
Query: 512 LLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLRE 550
+L M++ G P+ +TY ++ F D + A +L+E
Sbjct: 340 ILKGMQELGVHPDQETYTDYVIPCF--DSVNSARAILQE 376
Score = 35.4 bits (80), Expect = 0.39
Identities = 72/412 (17%), Positives = 148/412 (35%), Gaps = 95/412 (23%)
Query: 143 FNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD 202
+N L+K + +F K+ ++V+Y LI C VG I A ++L
Sbjct: 44 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKIL---- 99
Query: 203 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLK 262
M K + + ++L+ G G ++
Sbjct: 100 -------------------------------GFMKTKDLPVTEAVFSALVTGHARAGDME 128
Query: 263 EAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322
A +L M I P T+ L++A+ ++G + K L K ++ LM
Sbjct: 129 NAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFEL--------HLM 180
Query: 323 DGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKI- 381
D L I S + G ++ Q + C+ + + +A+NL + K+
Sbjct: 181 DRDLL--------QIIFSFSKAGYLSMSQKFWKKFT--CERRYIPDAMNLILLLVTEKLE 230
Query: 382 -------------------------IPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ 416
+ + VT N+ ++ K++ K + E+
Sbjct: 231 DVALQILLACPVSKEDGPSVFGSFFLQHCVTMNTPVE------KLTDYCKKLKEVQMHSF 284
Query: 417 PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQK 476
P + ++L + D A AL+ +K++G + + L+ G + ++ +
Sbjct: 285 PLQFTLHCALL-----ANKTDLAKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNVQGIIE 339
Query: 477 VFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTY 528
+ + + G + D TYT V FD+ + + +++NGC+ ++ +
Sbjct: 340 ILKGMQELGVHPDQETYTDY-----VIPCFDSVNSARAILQENGCLSDSDMF 386
Score = 33.5 bits (75), Expect = 1.5
Identities = 23/119 (19%), Positives = 45/119 (37%)
Query: 100 GIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQA 159
G V D +N L+ + Q K+ + PN +T+ LI C G I A
Sbjct: 36 GAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGA 95
Query: 160 LNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIID 218
+ + + + + L+ G + G + A +L + ++P Y +++
Sbjct: 96 SKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLN 154
Score = 33.1 bits (74), Expect = 2.0
Identities = 38/192 (19%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 291 CKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI--FDSMASRGVIA 348
C+ + K A + +++I+ + TY++L+ +A ++ F +G
Sbjct: 922 CRLNQKKGAYDIFLNAKEQNIVFNAETYSNLIKLLMSEDYFTQAMEVKAFAETHIKGFTL 981
Query: 349 NVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGL---GKLGKISCVL 405
N + + +I + + EAV + + ++ P+ + +I L G + I V
Sbjct: 982 NDAANSRLIITQVRRDYLKEAVTTLKTVLDQQQTPSRLAVTRVIQALAMKGDVENIEVVQ 1041
Query: 406 KLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNL---KDQGIRPDMYTYTVLI 462
K+++ + D ++ N+I A KN+++D AI + N+ +++ I P + L
Sbjct: 1042 KMLNGLEDSIGLSKMVFINNIALAQIKNNNIDAAIENIENMLTSENKVIEPQYFGLAYLF 1101
Query: 463 KGLCQSGKLEDA 474
+ + + +LE A
Sbjct: 1102 RKVIEE-QLEPA 1112
Score = 32.3 bits (72), Expect = 3.3
Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 2/64 (3%)
Query: 353 YTTMINGLCKIKMVDEAVNLFEEM--RCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDE 410
Y +IN C+ V++A+NL EE + + Y L+ L K GK+ +K++ E
Sbjct: 593 YAALINLCCRHDKVEDALNLKEEFDRLDSSAVLDTGNYLGLVRVLAKHGKLQDAIKILKE 652
Query: 411 MHDR 414
M ++
Sbjct: 653 MKEK 656
Score = 32.0 bits (71), Expect = 4.4
Identities = 51/268 (19%), Positives = 120/268 (44%), Gaps = 29/268 (10%)
Query: 286 LVDAFCKEGKVKEAKMMLGVTMKKDIIL---DVVTYNSLMDGYCLVKEINKAKDIFDSMA 342
LV K GK+++A +L +KD+++ +++ +++G L EI K + +++
Sbjct: 633 LVRVLAKHGKLQDAIKILKEMKEKDVLIKDTTALSFFHMLNGAALRGEIETVKQLHEAIV 692
Query: 343 SRGVIANVQSYTTMINGLCKIKM--------VDEAVNLFEEMRCRKIIPNVVTYNSLIDG 394
+ G+ + T + L + + ++ A++ +E+ K++P + + ++
Sbjct: 693 TLGL---AEPSTNISFPLVTVHLEKGDLSTALEVAIDCYEKY---KVLPRI---HDVLCK 743
Query: 395 LGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDAL-CKNHHVDKAIALLTNLKDQGIRP 453
L + G+ + K +D + + Q ++ Y+ L N+ K I ++ GIR
Sbjct: 744 LVEKGETDLIQKAMDFV-SQEQGEMVMLYDLFFAFLQTGNYKEAKKI-----IETPGIRA 797
Query: 454 DMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLD-VYTYTVMIQGFCVKGLFDAALAL 512
+ ++E +K+ E L K + D Y +++ + + G + A A+
Sbjct: 798 RSARLQWFCDRCVANNQVETLEKLVE-LTQKLFECDRDQMYYNLLKLYKINGDWQRADAV 856
Query: 513 LSKMEDNGCIPNAKTYEIVILSLFEKDE 540
+K+++ IP KT ++ L E ++
Sbjct: 857 WNKIQEENVIPREKTLRLLAEILREGNQ 884
Score = 31.2 bits (69), Expect = 7.4
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 470 KLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYE 529
+ E A ++++ L G DV Y +++ + + L+KME+ PN TY+
Sbjct: 21 RTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ 80
Query: 530 IVILSLFEKDENDMAEKLLREMIARGL 556
+I S + + A K+L M + L
Sbjct: 81 RLIASYCNVGDIEGASKILGFMKTKDL 107
Score = 31.2 bits (69), Expect = 7.4
Identities = 22/89 (24%), Positives = 44/89 (48%), Gaps = 9/89 (10%)
Query: 423 YNSILDALCKNHHVDKAIALLTNLK--DQGIRPDMYTYTVLIKGLCQSGKLEDAQKVF-- 478
Y ++++ C++ V+ A+ L D D Y L++ L + GKL+DA K+
Sbjct: 593 YAALINLCCRHDKVEDALNLKEEFDRLDSSAVLDTGNYLGLVRVLAKHGKLQDAIKILKE 652
Query: 479 ---EDLLVKGYNLDVYTYTVMIQGFCVKG 504
+D+L+K + ++ M+ G ++G
Sbjct: 653 MKEKDVLIK--DTTALSFFHMLNGAALRG 679
>YEQ7_YEAST (P40050) Hypothetical 79.5 kDa protein in PTP3-SER3
intergenic region
Length = 688
Score = 46.2 bits (108), Expect = 2e-04
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 287 VDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYC-LVKEINKAKDIFDSMASRG 345
V F K G++++A + + KK VV N +M Y +V+ A DIF+ G
Sbjct: 174 VQKFLKRGQLEKAVFLARLAKKKG----VVGMNLIMKYYIEVVQSQQSAVDIFNWRKKWG 229
Query: 346 VIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVL 405
V + S T + NGL K + N+V+ K G++ VL
Sbjct: 230 VPIDQHSITILFNGLSKQE-------------------NLVS--------KKYGEL--VL 260
Query: 406 KLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGL 465
K +D + D+ + I YN+ L AL N + + L N K G++ D TYT++I+
Sbjct: 261 KTIDSLCDKNELTE-IEYNTALAALI-NCTDETLVFKLLNKKCPGLKKDSITYTLMIRSC 318
Query: 466 CQSGKLEDAQKVFEDLLVK 484
+ + V DL+ K
Sbjct: 319 TRIADEKRFMVVLNDLMNK 337
>YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR1
intergenic region
Length = 864
Score = 40.4 bits (93), Expect = 0.012
Identities = 88/402 (21%), Positives = 151/402 (36%), Gaps = 70/402 (17%)
Query: 47 QDEENNLISSFNSLLHHKNPTPPIIQFN----KILSSLVKAKHHSTAL---SLHQQMELN 99
+DE+N + SL +K TP ++F + S+ +K + H+T HQ +
Sbjct: 39 EDEKNMM----GSLSKNKIITPEDVEFKLAQLREFSNTLKERIHNTKSVNSDGHQSNSIA 94
Query: 100 GIVSDFFTFNI-----LINCFSQLGLNSLSFSVF----GKILKKGFDPNAITFNTLIKGL 150
I D N+ + N L+ L S F ++ K + L K L
Sbjct: 95 PISEDSRNVNVTKTSSVPNEEKSKNLSDLIHSSFLEKMDHLVPKVIRERVADDDILAKNL 154
Query: 151 CLKGHIHQALNFHDKVVAQG--FHLDQVSYGTLINGLCKVGRITAALQL----LKRVDGK 204
+ H + A V++ +D + +NG K + L L L++++G
Sbjct: 155 FDRSHSNWAPVIDRLYVSEKRFMDIDSREFSVWLNGTVKYLPFHSILHLDEMLLEQINGD 214
Query: 205 LVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEA 264
+V+ N MY I +N+ K N D + V + M +L E
Sbjct: 215 VVKFNTHMYECIFNNLGNLKPTNFNQDGTNDKVILK-----------------MKELLER 257
Query: 265 VGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDG 324
K+ E IN KEG + M + I+ + + Y++
Sbjct: 258 YDKALKITEERINK-------------KEGFPSKVPKMT-----QAILNNCLKYSTKCSS 299
Query: 325 YCLVKE-INKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMR--CRKI 381
+ + I K +D + G+ N Q+ TT+I + +M +A N F+ M+ K
Sbjct: 300 FHDMDYFITKFRDDY------GITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKH 353
Query: 382 IPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITY 423
P++ TYN+++ K L L E+ D P TY
Sbjct: 354 FPDICTYNTMLRICEKERNFPKALDLFQEIQDHNIKPTTNTY 395
>PT09_YEAST (P32522) PET309 protein, mitochondrial precursor
Length = 965
Score = 38.9 bits (89), Expect = 0.036
Identities = 31/152 (20%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGK 397
F+++ G + ++Q Y ++ + +I +D L+ ++ R +IP SL+ K
Sbjct: 334 FNALFGIGKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQSLLYAHYK 393
Query: 398 LGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNL-KDQGIRPDMY 456
+G + + P+ T+ +L + +D A +L L +D +
Sbjct: 394 VGDFAACFSHFELFKKYDITPSTATHTIMLKVYRGLNDLDGAFRILKRLSEDPSVEITEG 453
Query: 457 TYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNL 488
+ +LI+ C++ AQ++F +L+ + YN+
Sbjct: 454 HFALLIQMCCKTTNHLIAQELF-NLMTEHYNI 484
Score = 38.1 bits (87), Expect = 0.061
Identities = 38/185 (20%), Positives = 80/185 (42%), Gaps = 13/185 (7%)
Query: 275 NINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMK----KDIILDVVTYNSLMDGYCLVKE 330
NI + S L+D + + + EA + K +D ++ V YN + Y ++
Sbjct: 483 NIQHTGKSISALMDVYIESNRPTEAIALFEKHSKNLSWRDGLISV--YNKAIKAYIGLRN 540
Query: 331 INKAKDIFDSMASRGVIANVQSYTTMINGLCKI-KMVDEAVNLFEEMRCRKIIPNVVTYN 389
NK +++FD + + + N + Y MI L + + + A+++ +++ +I T+
Sbjct: 541 ANKCEELFDKITTSKLAVNSEFYKMMIKFLVTLNEDCETALSIIDQLIKHSVIKVDATHF 600
Query: 390 SLI-DGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCK-----NHHVDKAIALL 443
+I + K G ++ L M P N IL A+ K N + + I ++
Sbjct: 601 EIIMEAYDKEGYRDGIINLYKTMSQNKVPANSKILYYILKAVAKKSLQNNEEIKETINMV 660
Query: 444 TNLKD 448
++ +
Sbjct: 661 EDIME 665
>POLB_MAIZE (P15718) Retrovirus-related Pol polyprotein from
transposon element BS1 (ORF 1) [Contains: Protease (EC
3.4.23.-); Reverse transcriptase (EC 2.7.7.49);
Endonuclease]
Length = 740
Score = 37.7 bits (86), Expect = 0.079
Identities = 20/72 (27%), Positives = 36/72 (49%), Gaps = 9/72 (12%)
Query: 471 LEDAQKVFEDLLVKGYN---------LDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGC 521
+EDA KVF+ +L KG + + +++Q + G A +L +M++NG
Sbjct: 442 VEDAAKVFDKMLTKGEEAPSVQRGVVMTAVAHNLLVQALFMDGRASDAYVVLEEMQNNGP 501
Query: 522 IPNAKTYEIVIL 533
P+ TY + +L
Sbjct: 502 FPDVFTYTLKVL 513
Score = 30.8 bits (68), Expect = 9.7
Identities = 17/67 (25%), Positives = 33/67 (48%), Gaps = 9/67 (13%)
Query: 366 VDEAVNLFEEMRC---------RKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ 416
V++A +F++M R ++ V +N L+ L G+ S +++EM + G
Sbjct: 442 VEDAAKVFDKMLTKGEEAPSVQRGVVMTAVAHNLLVQALFMDGRASDAYVVLEEMQNNGP 501
Query: 417 PPNIITY 423
P++ TY
Sbjct: 502 FPDVFTY 508
>SR54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)
Length = 433
Score = 34.3 bits (77), Expect = 0.88
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 328 VKEINKAKDI--FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNV 385
VK I +D+ F+ + R +A V + L KIK V E + EE+ ++ ++
Sbjct: 266 VKFIGVGEDVDEFEQFSPRKFVARVLGMGDLDTLLEKIKAVFEEEEVLEEIESGRL--DL 323
Query: 386 VTYNSLIDGLGKLGKISCVLKLV 408
+T+ ID L KLG +S V +L+
Sbjct: 324 LTFKKQIDSLLKLGPLSKVFQLL 346
>MSN5_YEAST (P52918) MSN5 protein
Length = 1224
Score = 34.3 bits (77), Expect = 0.88
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 37/163 (22%)
Query: 22 QQSPNPNFIGLFPSSISLYSQLHHHQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLV 81
Q + NPN S S+L++HQ E +I FN L N P F K+L+ L+
Sbjct: 1004 QGNANPN---------SAKSRLNNHQMEMRKII--FNDL----NTLAP---FLKLLNHLI 1045
Query: 82 KAKHHSTALS--------LHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILK 133
K + + L + N V ++FTF ++ N L LN L S F K
Sbjct: 1046 SFKDTKCSFNSILVMKCCLTSVLNQNNTVDEYFTFEVMKN----LLLNVLCNSAF----K 1097
Query: 134 KGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176
F F + LC + +A F ++ G+++D++
Sbjct: 1098 DSFHEALYAFTVIFLTLCKEYPSARAFLFE---ISNGYNIDEL 1137
>GLNA_BUTFI (Q05650) Glutamine synthetase (EC 6.3.1.2)
(Glutamate--ammonia ligase) (GS)
Length = 700
Score = 34.3 bits (77), Expect = 0.88
Identities = 22/84 (26%), Positives = 42/84 (49%), Gaps = 5/84 (5%)
Query: 262 KEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSL 321
KE + ++++LEN Y+ SI +++ + +++ V +KD+ ++V SL
Sbjct: 556 KEEIYSRYEILLEN-----YSKSIHIESLTMQEMIRKDLTEGLVAYEKDLSKEIVQKKSL 610
Query: 322 MDGYCLVKEINKAKDIFDSMASRG 345
+DG C E+ K + S A G
Sbjct: 611 LDGDCCALELGVLKSLDKSSAEMG 634
>Y391_HUMAN (O15091) Hypothetical protein KIAA0391
Length = 567
Score = 33.9 bits (76), Expect = 1.1
Identities = 23/71 (32%), Positives = 35/71 (48%), Gaps = 1/71 (1%)
Query: 173 LDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDL 232
L+ Y LI GL R AL LL+ + K++ P+ YN I + VN A++L
Sbjct: 208 LEPRGYSLLIRGLIHSDRWREALLLLEDIK-KVITPSKKNYNDCIQGALLHQDVNTAWNL 266
Query: 233 YSQMVAKRISP 243
Y +++ I P
Sbjct: 267 YQELLGHDIVP 277
>IMA2_HUMAN (P52292) Importin alpha-2 subunit (Karyopherin alpha-2
subunit) (SRP1-alpha) (RAG cohort protein 1)
Length = 529
Score = 33.9 bits (76), Expect = 1.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 52 NLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHH 86
NL + ++L +KNP PPI +IL +LV+ HH
Sbjct: 228 NLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH 262
>NPD_VIBCH (Q9KRX4) NAD-dependent deacetylase (EC 3.5.1.-)
(Regulatory protein SIR2 homolog)
Length = 246
Score = 33.5 bits (75), Expect = 1.5
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 373 FEEMRCRKIIPNVVTYNSLIDGLGKL-----GKISCVLKLVDEMHDRGQPPNII-TYNSI 426
F R RK++ + + N LGKL G ++ + + +D +H+RG NII + +
Sbjct: 56 FYNQRRRKLLSDAIQPNPAHLALGKLEKELQGSVTVITQNIDNLHERGGSQNIIHMHGEL 115
Query: 427 LDALC 431
L A C
Sbjct: 116 LKARC 120
>IMA2_MOUSE (P52293) Importin alpha-2 subunit (Karyopherin alpha-2
subunit) (SRP1-alpha) (RAG cohort protein 1) (Pendulin)
(Pore targeting complex 58 kDa subunit) (PTAC58)
(Importin alpha P1)
Length = 529
Score = 33.5 bits (75), Expect = 1.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 52 NLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHS 87
NL + ++L +KNP PP+ +IL +LV+ HH+
Sbjct: 228 NLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHN 263
>CND3_YEAST (Q06680) Condensin complex subunit 3 (CAPG homolog)
Length = 1035
Score = 33.1 bits (74), Expect = 2.0
Identities = 58/234 (24%), Positives = 102/234 (42%), Gaps = 34/234 (14%)
Query: 46 HQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTA---LSLHQQMELNGIV 102
++DEE++ ISSF+S + + + + I+++L K S+A L L + + +V
Sbjct: 530 NEDEEDDNISSFHSAVENLVQGNGNVSESDIINNLPPEKEASSATIVLCLTRSSYMLELV 589
Query: 103 SDFFTFNILINCFSQLGLNSLSFSVFGKILKKG---------FDPNAITFNTLIKGLCL- 152
+ T NILI + + I + G D N I G+C+
Sbjct: 590 NTPLTENILIASLMDTLITPAVRNTAPNIRELGVKNLGLCCLLDVKLAIDNMYILGMCVS 649
Query: 153 KGHIHQALNFHDKVVAQGFHLD--QVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNA 210
KG N K +A +D V T+++G KV I+ L ++ K+++ N
Sbjct: 650 KG------NASLKYIALQVIVDIFSVHGNTVVDGEGKVDSIS-----LHKIFYKVLKNNG 698
Query: 211 VMYNMII--DNMCKAKLVNDAF---DLYSQMVAKRISPDDFTCNSLI--YGFCI 257
+ +I + +CK L D F DL+ +V SP + + +L+ + FCI
Sbjct: 699 LPECQVIAAEGLCKLFLA-DVFTDDDLFETLVLSYFSPINSSNEALVQAFAFCI 751
>PPIA_SALTY (P20753) Peptidyl-prolyl cis-trans isomerase A precursor
(EC 5.2.1.8) (PPIase A) (Rotamase A)
Length = 190
Score = 32.7 bits (73), Expect = 2.6
Identities = 21/77 (27%), Positives = 37/77 (47%), Gaps = 6/77 (7%)
Query: 57 FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116
FN + K P PPI N+ + L ++ +++ + + + S FF N+ N F
Sbjct: 84 FNEQMQQKKPNPPIK--NEADNGL---RNTRGTIAMARTADKDSATSQFF-INVADNAFL 137
Query: 117 QLGLNSLSFSVFGKILK 133
G ++VFGK++K
Sbjct: 138 DHGQRDFGYAVFGKVVK 154
>ISPG_MYCGA (Q7NBH3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase (EC 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase)
Length = 359
Score = 32.3 bits (72), Expect = 3.3
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 29/202 (14%)
Query: 130 KILKK-GFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKV 188
++LK+ GFD I+ T L + QA K + HL GTLING K
Sbjct: 160 RMLKRFGFDNIVISLKTSSALLSM-----QAYELGAKKFSYPLHLGITEAGTLINGTIK- 213
Query: 189 GRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTC 248
+ LL + G ++ + + +D + AK + ++ LY +V P TC
Sbjct: 214 -SVAGLTPLLLKGIGDTIRIS--LSTNPVDEIKVAKKMLNSLGLYENLVDVVACP---TC 267
Query: 249 NSLIYG-FCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML---- 303
L + F + +++E V LH + SIL + G+ KEA + +
Sbjct: 268 GRLNFDLFKVTKEIEEFVKDLHFPL---------KVSILGCSVNGPGEAKEADIGIAGGK 318
Query: 304 --GVTMKKDIILDVVTYNSLMD 323
G+ KK +++ V L+D
Sbjct: 319 QEGIIFKKGVVVKSVKQEYLVD 340
>DNAA_MYCGE (P35888) Chromosomal replication initiator protein dnaA
Length = 437
Score = 32.3 bits (72), Expect = 3.3
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 33/184 (17%)
Query: 49 EENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSD--FF 106
E++NL S L P IQ +A+H + +S + LNGI + FF
Sbjct: 266 EKHNLSSLCEILTVKLKEKDPNIQITN------EARHDAAQISGNDVRALNGIATKLLFF 319
Query: 107 TFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKV 166
N + L + F F K KK FDP LI+ +C + ++ D V
Sbjct: 320 AKTSKQNLINTENLKEILFEEFEKFHKKSFDP-----YLLIENVCRRFNVPM-----DSV 369
Query: 167 VAQGFHLDQVSYGTLINGLCK---------VGRI-----TAALQLLKRVDGKLVQPNAVM 212
+++ + V + N L + +G+I ++ L +KRV K+++ ++ +
Sbjct: 370 LSENRKAELVRVRDVCNYLLRQKYNMQFQQIGKIFKRSHSSVLMAVKRV-AKMIENDSSL 428
Query: 213 YNMI 216
++I
Sbjct: 429 RDVI 432
>NPD_VIBPA (Q87PH8) NAD-dependent deacetylase (EC 3.5.1.-)
(Regulatory protein SIR2 homolog)
Length = 241
Score = 32.0 bits (71), Expect = 4.4
Identities = 19/70 (27%), Positives = 35/70 (49%), Gaps = 6/70 (8%)
Query: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKL-----GKISCVLKLVDEMHDRGQPPNII- 421
+ V F R +K+ + N+ LG+L GK++ + + +D +H+RG N+I
Sbjct: 51 DLVQSFYNQRRQKLQDETIKPNAAHLALGRLEAELEGKVTVITQNIDNLHERGGSQNVIH 110
Query: 422 TYNSILDALC 431
+ +L A C
Sbjct: 111 MHGELLKARC 120
>GL34_ARATH (Q9FLT3) Putative germin-like protein subfamily 3 member
4 precursor
Length = 210
Score = 32.0 bits (71), Expect = 4.4
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 461 LIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALA 511
++KG+ +G ++ K+F+ +L KG DV+ + + FC+ G F+ A A
Sbjct: 117 VVKGVVFAGFVDTNNKIFQTVLQKG---DVFVFPKGLLHFCLSGGFEPATA 164
>RPM2_YEAST (Q02773) Ribonuclease P protein component, mitochondrial
precursor (EC 3.1.26.5) (RNase P)
Length = 1202
Score = 31.6 bits (70), Expect = 5.7
Identities = 27/101 (26%), Positives = 44/101 (42%), Gaps = 16/101 (15%)
Query: 190 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFD--------LYSQMVAKRI 241
+I + Q LKR D + P ++ ++D++CK L N+ D Y M+ R+
Sbjct: 205 KINSLYQSLKRND---IVPPLEIFTKVLDSLCKRPLDNNDLDNKMYELLTCYQDMINNRL 261
Query: 242 SPDDFTCN----SLIYGFCIMGQLKEAVGL-LHKMILENIN 277
P D N SL G + Q + G +K+ +E N
Sbjct: 262 KPPDEIYNIVLLSLFKGSILAYQFENPNGSDFYKIAIELFN 302
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.324 0.140 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,470,440
Number of Sequences: 164201
Number of extensions: 2665659
Number of successful extensions: 6246
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 6176
Number of HSP's gapped (non-prelim): 79
length of query: 557
length of database: 59,974,054
effective HSP length: 115
effective length of query: 442
effective length of database: 41,090,939
effective search space: 18162195038
effective search space used: 18162195038
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 68 (30.8 bits)
Medicago: description of AC138580.2