BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138465.7 + phase: 0 /pseudo
(2330 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GDA9_WHEAT (P18573) Alpha/beta-gliadin MM1 precursor (Prolamin) 46 0.001
GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor (P... 45 0.003
GDA1_WHEAT (P04721) Alpha/beta-gliadin A-I precursor (Prolamin) 44 0.007
ZIPA_SALTY (P55894) Cell division protein zipA 42 0.015
GDA4_WHEAT (P04724) Alpha/beta-gliadin A-IV precursor (Prolamin) 42 0.015
PQ58_CAEEL (P34552) Protein pqn-58 (Protein YNK1) 41 0.034
NCO6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in... 41 0.034
GDA0_WHEAT (P02863) Alpha/beta-gliadin precursor (Prolamin) 41 0.034
EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 41 0.034
YO86_CAEEL (P34622) Hypothetical protein ZK1236.6 in chromosome III 41 0.045
GDA7_WHEAT (P04727) Alpha/beta-gliadin clone PW8142 precursor (P... 41 0.045
OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein) 40 0.058
NCO6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in... 40 0.058
GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin) 40 0.058
FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK 40 0.058
PCAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associa... 40 0.076
HOG1_HORVU (P17990) Gamma-hordein 1 precursor 39 0.13
AMEL_MONDO (Q28462) Amelogenin 39 0.13
P121_RAT (P52591) Nuclear envelope pore membrane protein POM 121... 39 0.17
GDA3_WHEAT (P04723) Alpha/beta-gliadin A-III precursor (Prolamin) 39 0.22
>GDA9_WHEAT (P18573) Alpha/beta-gliadin MM1 precursor (Prolamin)
Length = 307
Score = 46.2 bits (108), Expect = 0.001
Identities = 32/90 (35%), Positives = 40/90 (43%), Gaps = 6/90 (6%)
Query: 376 QSMATVAPINAAQLPPSYPYAPYSQ----HPFFPPFYHQYPLPSGQPQV--PVNAVVQQM 429
Q + P QLP P PY Q +P PF Q P P QPQ P + QQ
Sbjct: 73 QPYLQLQPFPQPQLPYPQPQLPYPQPQLPYPQPQPFRPQQPYPQSQPQYSQPQQPISQQQ 132
Query: 430 QQQPPVQQQQHQQARPTFPPIPMLYAELLP 459
QQQ QQQ+ QQ + +L +L+P
Sbjct: 133 QQQQQQQQQKQQQQQQQQILQQILQQQLIP 162
>GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor
(Prolamin)
Length = 296
Score = 44.7 bits (104), Expect = 0.003
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 390 PPSYPYAPYSQHPFFPPFYHQYPLPSGQPQV-----PVNAVVQQMQQQPPVQQQQHQQAR 444
P P+ P +P PPF Q P P QPQ P++ Q QQQ QQQQ QQ +
Sbjct: 82 PQPQPFPPQLPYPQPPPFSPQQPYPQPQPQYPQPQQPISQQQAQQQQQQQQQQQQQQQQQ 141
Query: 445 PTFPPIPMLYAELLP 459
I L +L+P
Sbjct: 142 QILQQI--LQQQLIP 154
>GDA1_WHEAT (P04721) Alpha/beta-gliadin A-I precursor (Prolamin)
Length = 262
Score = 43.5 bits (101), Expect = 0.007
Identities = 34/84 (40%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 394 PYAPYSQHPFFPPFYHQYPLPSGQPQV--PVNAVVQQMQQQPPVQQQQHQQARPTFPPIP 451
P PYSQ PF Q P P QPQ P + QQ QQQ QQQQ QQ + I
Sbjct: 84 PQLPYSQPQ---PFRPQQPYPQPQPQYSQPQQPISQQQQQQQQQQQQQQQQQQQIIQQI- 139
Query: 452 MLYAELLPTL--LLRGHCTTRHGK 473
L +L+P + +L+ H HGK
Sbjct: 140 -LQQQLIPCMDVVLQQH-NIVHGK 161
>ZIPA_SALTY (P55894) Cell division protein zipA
Length = 328
Score = 42.4 bits (98), Expect = 0.015
Identities = 35/93 (37%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 364 ETEVGMVSAGAGQSMATVAPINAAQLPPSYPYAPYSQHPFFPPFYHQYPLPSGQP-QVPV 422
E V V+ GQS AP + Q PYA P PP Q P QP Q PV
Sbjct: 65 EVRVHRVNHAPGQSQEHDAPRQSPQHQYQPPYASAQPRPAAPP---QPQAPMQQPVQQPV 121
Query: 423 NAVVQQMQQQP---PVQQQQHQQARPTFPPIPM 452
Q Q QP PVQ Q Q A P+ P P+
Sbjct: 122 QPAPQPQQVQPSAPPVQPPQQQPAPPSQAPQPV 154
>GDA4_WHEAT (P04724) Alpha/beta-gliadin A-IV precursor (Prolamin)
Length = 297
Score = 42.4 bits (98), Expect = 0.015
Identities = 28/69 (40%), Positives = 32/69 (45%), Gaps = 2/69 (2%)
Query: 376 QSMATVAPINAAQLPPSYPYAPYSQ-HPFFPPFYHQYPLPS-GQPQVPVNAVVQQMQQQP 433
Q + P QLP P PY Q PF P + P P QPQ P++ QQ QQQ
Sbjct: 73 QPYMQLQPFPQPQLPYPQPQLPYPQPQPFRPQQSYPQPQPQYSQPQQPISQQQQQQQQQQ 132
Query: 434 PVQQQQHQQ 442
QQQ QQ
Sbjct: 133 QQQQQILQQ 141
>PQ58_CAEEL (P34552) Protein pqn-58 (Protein YNK1)
Length = 861
Score = 41.2 bits (95), Expect = 0.034
Identities = 58/236 (24%), Positives = 91/236 (37%), Gaps = 34/236 (14%)
Query: 253 NTRLKPNREFLISLSQ-----KKDESFREYAQIWRGAAARITPALDEEEMTQTFLKTLKK 307
NT +FL ++++ ++ S + AQI+ R+ +LD +E ++
Sbjct: 581 NTNCDIANDFLKAMAENQLINEEHISKEKIAQIFGDLKRRVQSSLDTQETLMNQIQAANN 640
Query: 308 DYV------------ERMIIAAPNNFFEMVTMGTRLEEAVR-----EGIIVFEKVESSVN 350
+ ER++ V + LEE + I+V + + S
Sbjct: 641 TFTGEKTGSSTGAERERILKMLAQASDAYVELKANLEEGTKFYNDLTPILVRLQQKVSDF 700
Query: 351 ASKRYGNDHHKKKETEVGMVSAGAGQSMATVAPINAA-QLPPSYPYAPYSQHPFFPPFYH 409
A R ++ ++ +VS + A +P NA + PP P AP + P PP
Sbjct: 701 AFARQTEKEDLMRQLQLSIVSG----TNAAQSPANAPPRPPPPRPAAPSVESPIPPPRTQ 756
Query: 410 QYPLPSGQPQVPVNAVVQQMQQQPPVQQ-QQH----QQARPTFPPIPMLYAELLPT 460
Q P P Q QQQP +QQ QQH QQ P P PM + PT
Sbjct: 757 Q--SMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYYQQPMPYGQPQPMFQPQYQPT 810
>NCO6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in
breast cancer-3 protein) (Cancer-amplified
transcriptional coactivator ASC-2) (Activating signal
cointegrator-2) (ASC-2) (Peroxisome
proliferator-activated receptor-interacting protein) (PP
Length = 2063
Score = 41.2 bits (95), Expect = 0.034
Identities = 32/94 (34%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 390 PPSYPYAPYSQHPF--FPPFYHQYPLPSGQP--QVPVNAVVQQMQQQPPVQQQQHQQARP 445
PP YP P Q P PP Q+ P QP Q P + QQ Q PP Q Q QQ +
Sbjct: 970 PPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQ 1029
Query: 446 TFPPIPMLYAELLPTLLLRGHCTTRHGKPPPDPL 479
+ ML + P + H PP PL
Sbjct: 1030 QQQMMMMLMMQQDPKSVRLPVSQNVH--PPRGPL 1061
Score = 33.9 bits (76), Expect = 5.5
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 388 QLPPSYPYAPYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPVQQQQHQQ 442
Q PS AP HP P ++ P+ PQ+ QQ QQQ QQQQ QQ
Sbjct: 229 QSHPSGSLAP-PHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQ 282
>GDA0_WHEAT (P02863) Alpha/beta-gliadin precursor (Prolamin)
Length = 286
Score = 41.2 bits (95), Expect = 0.034
Identities = 26/55 (47%), Positives = 27/55 (48%), Gaps = 5/55 (9%)
Query: 390 PPSYPYAPYSQHPFFPPFYHQYPLPSGQPQV--PVNAVVQQMQQQPPVQQQQHQQ 442
P P PYSQ PF Q P P QPQ P + QQ QQQ QQQQ QQ
Sbjct: 80 PFPQPQLPYSQPQ---PFRPQQPYPQPQPQYSQPQQPISQQQQQQQQQQQQQQQQ 131
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein)
Length = 620
Score = 41.2 bits (95), Expect = 0.034
Identities = 27/89 (30%), Positives = 35/89 (38%), Gaps = 9/89 (10%)
Query: 390 PPSYPYAPYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPVQQQQHQQARPTFPP 449
PP++ +AP + P P H P P QPQ P PP Q Q PT+ P
Sbjct: 234 PPTHRHAPPTHQP--SPLRHLPPSPRRQPQPPT-------YSPPPPAYAQSPQPSPTYSP 284
Query: 450 IPMLYAELLPTLLLRGHCTTRHGKPPPDP 478
P Y+ P+ + PPP P
Sbjct: 285 PPPTYSPPPPSPIYSPPPPAYSPSPPPTP 313
Score = 36.6 bits (83), Expect = 0.84
Identities = 32/113 (28%), Positives = 41/113 (35%), Gaps = 23/113 (20%)
Query: 382 APINAAQLPPSYPYAPYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQ-QPPVQQQQH 440
AP + PP + P + P PP H +P P Q P + Q QPP
Sbjct: 149 APPSGGHTPPRGQHPPSHRRPS-PPSRHGHPPPPTYAQPPPTPIYSPSPQVQPP------ 201
Query: 441 QQARPTFPPIPMLYAELLPTLLLRGH-----------CTTRHGKPPPDPLLLR 482
PT+ P P + + P+ RGH T RH P P LR
Sbjct: 202 ----PTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHAPPTHRHAPPTHQPSPLR 250
Score = 36.6 bits (83), Expect = 0.84
Identities = 27/97 (27%), Positives = 36/97 (36%), Gaps = 10/97 (10%)
Query: 382 APINAAQLPPSYPYAP--YSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPVQQQQ 439
AP + PP+Y P Y+Q P PP Y P P P + PP Q
Sbjct: 405 APPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQ 464
Query: 440 HQQARPTFPPIPMLYAELLPTLLLRGHCTTRHGKPPP 476
PT+ P P Y+ P+ + + PPP
Sbjct: 465 PPPPPPTYSPPPPAYSPPPPSPI--------YSPPPP 493
Score = 34.7 bits (78), Expect = 3.2
Identities = 27/94 (28%), Positives = 34/94 (35%), Gaps = 6/94 (6%)
Query: 383 PINAAQLPPSYPYAPYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPVQQQQHQQ 442
P+ + PPSY P + P PP P PS P P + PP
Sbjct: 351 PVYSPPPPPSYSPPPPTYLP--PPPPSSPPPPSFSPPPP----TYEQSPPPPPAYSPPLP 404
Query: 443 ARPTFPPIPMLYAELLPTLLLRGHCTTRHGKPPP 476
A PT+ P P Y+ PT + PPP
Sbjct: 405 APPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPP 438
>YO86_CAEEL (P34622) Hypothetical protein ZK1236.6 in chromosome III
Length = 206
Score = 40.8 bits (94), Expect = 0.045
Identities = 25/68 (36%), Positives = 30/68 (43%), Gaps = 6/68 (8%)
Query: 384 INAAQLPPSYPYAPYSQHPFFPPFYH-QYPLPSGQPQVPVNAVVQQMQQQPPVQ-----Q 437
+ A P P PY Q PF P F QY PSGQ + Q QQQ P Q +
Sbjct: 23 VGAGAAPTMAPQNPYGQQPFQPQFQQGQYQQPSGQQYQSMQQQFQSPQQQAPTQPTHPDR 82
Query: 438 QQHQQARP 445
+ +Q A P
Sbjct: 83 ESYQTALP 90
>GDA7_WHEAT (P04727) Alpha/beta-gliadin clone PW8142 precursor
(Prolamin)
Length = 313
Score = 40.8 bits (94), Expect = 0.045
Identities = 26/60 (43%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 388 QLPPSYPYAPYSQHPFFPPFYHQYPLPSG-----QPQVPVNAVVQQMQQQPPVQQQQHQQ 442
Q P P PY Q FPP Q P P QPQ P++ Q QQQ QQQQ QQ
Sbjct: 80 QPQPFLPQLPYPQPQSFPP---QQPYPQQRPKYLQPQQPISQQQAQQQQQQQQQQQQQQQ 136
Score = 36.6 bits (83), Expect = 0.84
Identities = 28/76 (36%), Positives = 30/76 (38%), Gaps = 16/76 (21%)
Query: 383 PINAAQLPPSYPY---------APYSQHPFFP---PFYHQYPLPSGQPQVPVNAVVQQ-- 428
P Q PP PY PY Q FP PF Q P P Q P QQ
Sbjct: 48 PGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQPQPFLPQLPYPQPQSFPPQQPYPQQRP 107
Query: 429 --MQQQPPVQQQQHQQ 442
+Q Q P+ QQQ QQ
Sbjct: 108 KYLQPQQPISQQQAQQ 123
>OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein)
Length = 2716
Score = 40.4 bits (93), Expect = 0.058
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 389 LPPSYPYAPYSQH---PFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPVQQQQHQQARP 445
LPP +P+ Y ++ P P+ + PLP G+P QQQP QQQ QQ P
Sbjct: 140 LPPPHPHPAYGRYHADPNMDPYRYGQPLPGGKP---------PQQQQPHPQQQPPQQPGP 190
Query: 446 TFPPIPMLYAELLPTLLLRGHCTT-----RHGKPPPDP 478
P +P +G T + PPP P
Sbjct: 191 GGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPPPPP 228
Score = 39.3 bits (90), Expect = 0.13
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 7/100 (7%)
Query: 382 APINAAQLPPSYPYAPYSQHPFFPPFY--HQYPLPSGQPQVPVNAVVQQMQQQPPVQQQQ 439
AP A PP P+ P Q P + H+YP G P P Q QQQ P QQ
Sbjct: 1530 APPRGAAPPPGAPHGPPIQQPAGVAQWDQHRYPPQQGPPPPPQQQQQPQQQQQQPPYQQV 1589
Query: 440 HQQARPTFPPIPMLYAELLPTLLLRGHCTTRHGKPPPDPL 479
P P +A++ P G PP PL
Sbjct: 1590 AGPPGQQPPQAPPQWAQMNP-----GQTAQSGIAPPGSPL 1624
>NCO6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in
breast cancer-3 protein) (Cancer-amplified
transcriptional coactivator ASC-2) (Activating signal
cointegrator-2) (ASC-2) (Peroxisome
proliferator-activated receptor-interacting protein) (PP
Length = 2067
Score = 40.4 bits (93), Expect = 0.058
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 390 PPSYPYAPYSQHPF--FPPFYHQYPLPSGQP--QVPVNAVVQQMQQQPPVQQQQHQQ 442
PP YP P Q P PP Q+ P QP Q P + QQ Q PP Q Q QQ
Sbjct: 974 PPGYPTQPVEQRPLPQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQQQ 1030
Score = 33.1 bits (74), Expect = 9.3
Identities = 30/94 (31%), Positives = 36/94 (37%), Gaps = 21/94 (22%)
Query: 369 MVSAGAGQSMATVAPINAAQLPPSYPYAPYSQ-----------------HPF--FPPFYH 409
M G S + +AP +L P P P SQ HP PP +H
Sbjct: 183 MTPQGGNMSSSMMAPGPNPELQPRTP-RPASQSDAMDPLLSGLHIQQQSHPSGSLPPAHH 241
Query: 410 QY-PLPSGQPQVPVNAVVQQMQQQPPVQQQQHQQ 442
P+P + P N Q QQQ QQQQ QQ
Sbjct: 242 SMQPVPVNRQMNPANFPQLQQQQQQQQQQQQQQQ 275
>GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin)
Length = 319
Score = 40.4 bits (93), Expect = 0.058
Identities = 26/60 (43%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 388 QLPPSYPYAPYSQHPFFPPFYHQYPLPSGQPQV-----PVNAVVQQMQQQPPVQQQQHQQ 442
Q P P PY Q FPP Q P P QPQ P++ Q QQQ QQQQ QQ
Sbjct: 83 QPQPFPPQLPYPQPQSFPP---QQPYPQQQPQYLQPQQPISQQQAQQQQQQQQQQQQQQQ 139
Score = 38.1 bits (87), Expect = 0.29
Identities = 36/103 (34%), Positives = 40/103 (37%), Gaps = 28/103 (27%)
Query: 383 PINAAQLPPSYPY---------APYSQ-HPF-----FPP---------FYHQYPLPSGQP 418
P Q PP PY PY Q PF FPP F Q P P QP
Sbjct: 51 PGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQPQPFPPQLPYPQPQSFPPQQPYPQQQP 110
Query: 419 QV--PVNAVVQQMQQQPPVQQQQHQQARPTFPPIPMLYAELLP 459
Q P + QQ QQ QQQQ QQ + I L +L+P
Sbjct: 111 QYLQPQQPISQQQAQQQQQQQQQQQQQQQILQQI--LQQQLIP 151
>FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK
Length = 1347
Score = 40.4 bits (93), Expect = 0.058
Identities = 40/111 (36%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 376 QSMATVAPINAAQLPPSYPYAPYSQH-----PFFPPFYHQYPLPSGQPQVPVNAVVQQMQ 430
Q VAP Q P P AP Q+ P P +Q P QPQ PV Q Q
Sbjct: 754 QPQQPVAPQQQYQ-QPQQPVAPQPQYQQPQQPVAPQPQYQQPQYQ-QPQQPVAPQQQYQQ 811
Query: 431 QQPPVQQQQHQQARPTFPPIPMLYAELLPTLLLR-GHCTTRHGKPPPDPLL 480
Q PV QQ Q +P P +P LL LL+R G H P P L
Sbjct: 812 PQQPVTQQPQYQ-QPQQPVVPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSL 861
>PCAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated
protein (PC2 glutamine/Q-rich-associated protein)
(TPA-inducible gene-1) (TIG-1) (Activator-recruited
cofactor 105 kDa component) (ARC105) (CTG repeat protein
7a)
Length = 788
Score = 40.0 bits (92), Expect = 0.076
Identities = 27/61 (44%), Positives = 33/61 (53%), Gaps = 9/61 (14%)
Query: 426 VQQMQQQPPVQQQQHQQARPTFPPI---PMLY-----AELLPTLLLRGHCTTRHGKPPPD 477
+QQ QQQ QQQQ QQA PPI PM ++ LP L + H T+H +PPP
Sbjct: 246 LQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMH-HTQHHQPPPQ 304
Query: 478 P 478
P
Sbjct: 305 P 305
>HOG1_HORVU (P17990) Gamma-hordein 1 precursor
Length = 305
Score = 39.3 bits (90), Expect = 0.13
Identities = 34/91 (37%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 377 SMATVAPINAAQLPPSY--------PYAPYSQHPFFPPFYHQYPLPSG----QPQVPVNA 424
+MAT + Q+ PS PY P SQ PF Q+P P QPQ P
Sbjct: 11 AMATTFATSEMQVNPSVQVQPTQQQPY-PESQQPFISQSQQQFPQPQQPFPQQPQQPFPQ 69
Query: 425 VVQQMQQQPPVQQQQHQQARPT--FPPIPML 453
QQ QQP QHQ +PT FP P+L
Sbjct: 70 SQQQCLQQP-----QHQFPQPTQQFPQRPLL 95
>AMEL_MONDO (Q28462) Amelogenin
Length = 202
Score = 39.3 bits (90), Expect = 0.13
Identities = 32/76 (42%), Positives = 35/76 (45%), Gaps = 8/76 (10%)
Query: 383 PINAAQ--LPPSYPYAPY-SQHPFFPPFYHQ--YPLPSGQPQVPVNAVVQQMQQQPPVQQ 437
PI AAQ PP P P QHP P +HQ P P QP P A QQ Q P+Q
Sbjct: 71 PIMAAQQPAPPQQPVMPVPGQHPMAPTQHHQPNLPQPGQQPYQPQPA--QQPQPHQPIQP 128
Query: 438 -QQHQQARPTFPPIPM 452
Q Q +P P PM
Sbjct: 129 IQPIQPIQPMQPMQPM 144
>P121_RAT (P52591) Nuclear envelope pore membrane protein POM 121
(Pore membrane protein of 121 kDa) (P145)
Length = 1199
Score = 38.9 bits (89), Expect = 0.17
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 15/110 (13%)
Query: 26 LAAQEQSATAIPVATAIPI-ATSVIPT-----ASTDARFAMPTGFPYGLPPFFTPSTAAG 79
L +AT P +TA+P AT+ T S + AMP P+ L P+T A
Sbjct: 716 LPTSSSAATTTPASTALPTTATATAHTFKPIFESVEPFAAMPLSPPFSLKQTTAPATTAA 775
Query: 80 TSGTANNGAVPGTNTISINTTLPQ---------TTATVTEPLVHAISQGV 120
TS G T+T++ TT TTA T + + SQ +
Sbjct: 776 TSAPLLTGLGTATSTVATGTTASASKPVFGFGVTTAASTASTIASTSQSI 825
>GDA3_WHEAT (P04723) Alpha/beta-gliadin A-III precursor (Prolamin)
Length = 282
Score = 38.5 bits (88), Expect = 0.22
Identities = 22/53 (41%), Positives = 25/53 (46%), Gaps = 2/53 (3%)
Query: 390 PPSYPYAPYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPVQQQQHQQ 442
P P+ P +P PF Q P P QPQ P Q + QQ QQQQ QQ
Sbjct: 77 PQPQPFPPQLPYPQTQPFPPQQPYPQPQPQYP--QPQQPISQQQAQQQQQQQQ 127
Score = 37.4 bits (85), Expect = 0.49
Identities = 32/93 (34%), Positives = 35/93 (37%), Gaps = 21/93 (22%)
Query: 383 PINAAQLPPSYPYA---------PYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQP 433
P Q PP PY PY Q FPP Q P P QP P Q Q P
Sbjct: 52 PGQQEQFPPQQPYPHQQPFPSQQPYPQPQPFPP---QLPYPQTQPFPPQQPYPQPQPQYP 108
Query: 434 PVQQ-------QQHQQARPTFPPIPMLYAELLP 459
QQ QQ QQ + T I L +L+P
Sbjct: 109 QPQQPISQQQAQQQQQQQQTLQQI--LQQQLIP 139
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.338 0.146 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 245,471,756
Number of Sequences: 164201
Number of extensions: 9902522
Number of successful extensions: 43282
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 41660
Number of HSP's gapped (non-prelim): 1066
length of query: 2330
length of database: 59,974,054
effective HSP length: 126
effective length of query: 2204
effective length of database: 39,284,728
effective search space: 86583540512
effective search space used: 86583540512
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 74 (33.1 bits)
Medicago: description of AC138465.7