BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC138199.3 - phase: 0 
         (306 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AEC1_ARATH (Q9C6B8) Auxin efflux carrier component 1 (PIN-FORMED...   437  e-122
AEC7_ARATH (Q940Y5) Auxin efflux carrier component 7 (AtPIN7)         373  e-103
AEC3_ARATH (Q9S7Z8) Auxin efflux carrier component 3 (AtPIN3)         368  e-102
AEC4_ARATH (Q8RWZ6) Auxin efflux carrier component 4 (AtPIN4)         360  2e-99
AEC2_ARATH (Q9LU77) Auxin efflux carrier component 2 (AtPIN2) (A...   359  5e-99
AEC6_ARATH (Q9SQH6) Probable auxin efflux carrier component 6 (A...   294  2e-79
AEC8_ARATH (Q9FFD0) Putative auxin efflux carrier component 8 (A...   180  3e-45
AEC5_ARATH (Q9LFP6) Putative auxin efflux carrier component 5 (A...   173  4e-43
YFDV_ECOLI (P76519) Hypothetical protein yfdV                          37  0.061
YL52_YEAST (P54072) Hypothetical 64.0 kDa protein in ACS2-MPT4 i...    35  0.23
DNAK_WIGBR (Q8D2Q5) Chaperone protein dnaK (Heat shock protein 7...    31  3.4
YA31_METJA (Q58437) Hypothetical protein MJ1031                        30  5.7
OAC_BPSF6 (P23214) O-acetyl transferase (EC 2.3.1.-) (O-antigen ...    30  5.7
TPPB_SALTY (Q8ZPM6) Tripeptide permease tppB                           30  7.5
NU5M_CHICK (P18940) NADH-ubiquinone oxidoreductase chain 5 (EC 1...    30  7.5
COX3_RICPR (Q9ZDX3) Probable cytochrome c oxidase polypeptide II...    30  7.5
ATOS_ECOLI (Q06067) Sensor protein atoS (EC 2.7.3.-)                   30  7.5

>AEC1_ARATH (Q9C6B8) Auxin efflux carrier component 1 (PIN-FORMED
           protein) (AtPIN1)
          Length = 622

 Score =  437 bits (1123), Expect = e-122
 Identities = 216/247 (87%), Positives = 232/247 (93%), Gaps = 1/247 (0%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
           MIT  DFYHVMTAMVPLYVAMILAYGSVKWWKIF+PDQCSGINRFVALFAVPLLSFHFIA
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query: 61  SNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           +NNPY MNLRFLAAD+LQK+I+L LL +W   S+ G L+WTITLFSLSTLPNTLVMGIPL
Sbjct: 61  ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLIFEQFPDTAGSIVSIHVDSD 180
           LKGMYG FSG LMVQIVVLQCIIWYTLMLF+FE+RGA+LLI EQFPDTAGSIVSIHVDSD
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIVSIHVDSD 180

Query: 181 VMSLDGRTPLETDAEIKEDGKLHITVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIY 240
           +MSLDGR PLET+AEIKEDGKLH+TVR+SNASRSDIYSRRSQGLS+ TPRPSNLTNAEIY
Sbjct: 181 IMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSA-TPRPSNLTNAEIY 239

Query: 241 SLQSSRN 247
           SLQSSRN
Sbjct: 240 SLQSSRN 246


>AEC7_ARATH (Q940Y5) Auxin efflux carrier component 7 (AtPIN7)
          Length = 619

 Score =  373 bits (957), Expect = e-103
 Identities = 184/245 (75%), Positives = 213/245 (86%), Gaps = 3/245 (1%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
           MIT  D Y V+TA++PLYVAMILAYGSV+WWKIFSPDQCSGINRFVA+FAVPLLSFHFI+
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           SNNPY MNLRF+AADTLQKLI+L LL IW+NF++ G LEW+IT+FSLSTLPNTLVMGIPL
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLIFEQFPDTAGSIVSIHVDSD 180
           L  MYGE+SGSLMVQIVVLQCIIWYTL+LF+FE+RGA++LI EQFP+T  SIVS  V+SD
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFPETGASIVSFKVESD 180

Query: 181 VMSLDGRTPLETDAEIKEDGKLHITVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIY 240
           V+SLDG   LETDA+I +DGKLH+TVRKSNASR   Y     G ++ TPRPSNLT AEIY
Sbjct: 181 VVSLDGHDFLETDAQIGDDGKLHVTVRKSNASRRSFY---GGGGTNMTPRPSNLTGAEIY 237

Query: 241 SLQSS 245
           SL ++
Sbjct: 238 SLNTT 242


>AEC3_ARATH (Q9S7Z8) Auxin efflux carrier component 3 (AtPIN3)
          Length = 640

 Score =  368 bits (945), Expect = e-102
 Identities = 183/245 (74%), Positives = 213/245 (86%), Gaps = 6/245 (2%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
           MI+  D Y V+TA++PLYVAMILAYGSV+WWKIFSPDQCSGINRFVA+FAVPLLSFHFI+
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           +NNPY MNLRF+AADTLQK+I+L LL +W+NF++ G LEW+IT+FSLSTLPNTLVMGIPL
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLIFEQFPDTAGSIVSIHVDSD 180
           L  MYGE+SGSLMVQIVVLQCIIWYTL+LF+FEFRGA++LI EQFP+TA SIVS  V+SD
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFPETAASIVSFKVESD 180

Query: 181 VMSLDGRTPLETDAEIKEDGKLHITVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIY 240
           V+SLDG   LETDAEI +DGKLH+TVRKSNA      SRRS    + TPRPSNLT AEIY
Sbjct: 181 VVSLDGHDFLETDAEIGDDGKLHVTVRKSNA------SRRSFCGPNMTPRPSNLTGAEIY 234

Query: 241 SLQSS 245
           SL ++
Sbjct: 235 SLSTT 239


>AEC4_ARATH (Q8RWZ6) Auxin efflux carrier component 4 (AtPIN4)
          Length = 616

 Score =  360 bits (924), Expect = 2e-99
 Identities = 179/245 (73%), Positives = 206/245 (84%), Gaps = 9/245 (3%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
           MIT  D Y V+TA+VPLYVAMILAYGSV+WWKIFSPDQCSGINRFVA+FAVPLLSFHFI+
Sbjct: 1   MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           +N+PY MN RF+AADTLQK+I+L LLA+W+N +K G LEW IT+FSLSTLPNTLVMGIPL
Sbjct: 61  TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLIFEQFPDTAGSIVSIHVDSD 180
           L  MYG ++GSLMVQ+VVLQCIIWYTL+LF+FE+RGA+LLI EQFP+T  SIVS  V+SD
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETGASIVSFKVESD 180

Query: 181 VMSLDGRTPLETDAEIKEDGKLHITVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIY 240
           V+SLDG   LETDAEI  DGKLH+TVRKSNASR  +           TPRPSNLT AEIY
Sbjct: 181 VVSLDGHDFLETDAEIGNDGKLHVTVRKSNASRRSLMM---------TPRPSNLTGAEIY 231

Query: 241 SLQSS 245
           SL S+
Sbjct: 232 SLSST 236


>AEC2_ARATH (Q9LU77) Auxin efflux carrier component 2 (AtPIN2)
           (Auxin efflux carrier AGR) (Polar-auxin-transport efflux
           component AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive
           root 1) (AtEIR1) (WAVY6)
          Length = 647

 Score =  359 bits (921), Expect = 5e-99
 Identities = 183/251 (72%), Positives = 211/251 (83%), Gaps = 5/251 (1%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
           MIT  D Y V+ AMVPLYVAMILAYGSV+WW IF+PDQCSGINRFVA+FAVPLLSFHFI+
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           SN+PY MN  FLAAD+LQK++IL  L +W  FS+RG LEW ITLFSLSTLPNTLVMGIPL
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLIFEQFPDTAGSIVSIHVDSD 180
           L+ MYG+FSG+LMVQIVVLQ IIWYTLMLF+FEFRGA+LLI EQFP+TAGSI S  VDSD
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSITSFRVDSD 180

Query: 181 VMSLDGRTPLETDAEIKEDGKLHITVRKSNASRSDIYS---RRSQGLSSN--TPRPSNLT 235
           V+SL+GR PL+TDAEI +DGKLH+ VR+S+A+ S I S       GL+S+  TPR SNLT
Sbjct: 181 VISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSMITPRASNLT 240

Query: 236 NAEIYSLQSSR 246
             EIYS+QSSR
Sbjct: 241 GVEIYSVQSSR 251


>AEC6_ARATH (Q9SQH6) Probable auxin efflux carrier component 6
           (AtPIN6)
          Length = 570

 Score =  294 bits (753), Expect = 2e-79
 Identities = 148/248 (59%), Positives = 187/248 (74%), Gaps = 4/248 (1%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
           MIT  +FY VM AM PLY AM +AYGSVKW KIF+P QCSGINRFV++FAVP+LSFHFI+
Sbjct: 1   MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60

Query: 61  SNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
            NNPYKM+  F+ ADTL K+ +  LL++W+ F K G L+W ITLFS++TLPNTLVMGIPL
Sbjct: 61  QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLIFEQFP-DTAGSIVSIHVDS 179
           L+ MYG+++ +LMVQ+VVLQCIIWYTL+LF+FE R ARLLI  +FP   AGSI  I VD 
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDD 180

Query: 180 DVMSLDGRTPLETDAEIKEDGKLHITVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEI 239
           DV+SLDG  PL T+ E   +G++ + +R+S +S  D     S  L   TPR SNL+NAEI
Sbjct: 181 DVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCL---TPRASNLSNAEI 237

Query: 240 YSLQSSRN 247
           +S+ +  N
Sbjct: 238 FSVNTPNN 245


>AEC8_ARATH (Q9FFD0) Putative auxin efflux carrier component 8
           (AtPIN8)
          Length = 351

 Score =  180 bits (457), Expect = 3e-45
 Identities = 86/157 (54%), Positives = 111/157 (69%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
           MI   D Y V+ AMVPLYVA+IL YGSVKWW IF+ DQC  INR V  F +PL +  F A
Sbjct: 1   MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60

Query: 61  SNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
             +P+ MN RF+AAD L K+II+ +LA+W+ +S +G   W+IT FSL TL N+LV+G+PL
Sbjct: 61  HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGA 157
            K MYG+ +  L+VQ  V Q I+W TL+LF+ EFR A
Sbjct: 121 AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKA 157


>AEC5_ARATH (Q9LFP6) Putative auxin efflux carrier component 5
           (AtPIN5)
          Length = 367

 Score =  173 bits (439), Expect = 4e-43
 Identities = 87/200 (43%), Positives = 131/200 (65%), Gaps = 10/200 (5%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA 60
           MI+  D YHV++A VPLYV+M L + S +  K+FSP+QC+GIN+FVA F++PLLSF  I+
Sbjct: 1   MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60

Query: 61  SNNPYKMNLRFLAADTLQKLIILCLLAIWSNF-----SKRGCLEWTITLFSLSTLPNTLV 115
            NNP+KM+ + + +D LQK +++ +LA+   F      + G L W IT  S+S LPNTL+
Sbjct: 61  ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120

Query: 116 MGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLIFEQFPDTAGSIVSI 175
           +G+P+L  +YG+ + S++ QIVVLQ +IWYT++LF+FE   AR L     P +  S+   
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARAL-----PSSGASLEHT 175

Query: 176 HVDSDVMSLDGRTPLETDAE 195
             D +  +++     E D E
Sbjct: 176 GNDQEEANIEDEPKEEEDEE 195


>YFDV_ECOLI (P76519) Hypothetical protein yfdV
          Length = 314

 Score = 37.0 bits (84), Expect = 0.061
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 14/132 (10%)

Query: 14  MVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLA 73
           ++P+ V M+L Y S +  + FS DQ    N+ V  +A+P   F  I      + N   + 
Sbjct: 9   LLPIIVIMLLGYFSGRR-ETFSEDQARAFNKLVLNYALPAALFVSIT-----RANREMIF 62

Query: 74  ADTLQKLIILCLLAIWSNFSKRGCLEW-------TITLFSLSTLPNTLVMGIPLLKGMYG 126
           ADT   L+ L ++     FS  GC ++             ++  P    +G  +L  +YG
Sbjct: 63  ADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYG 122

Query: 127 E-FSGSLMVQIV 137
           +  S  L+V I+
Sbjct: 123 DSVSTGLVVAII 134


>YL52_YEAST (P54072) Hypothetical 64.0 kDa protein in ACS2-MPT4
           intergenic region
          Length = 576

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 8   YHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKM 67
           Y  +  +  +Y  M++ Y   K+  I S +   GI+  V    +P L+F+ I SN  ++ 
Sbjct: 10  YIALKPIFKIYTIMLVGYLVAKF-DIVSMENAKGISNMVVNAILPCLTFNKIVSNISWR- 67

Query: 68  NLRFLAADTLQKLIILCL---LAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPLLKGM 124
           +++ +    L   I+  L    A+++ F+     ++   L      PN   + I  ++ M
Sbjct: 68  DIKEIGVIILSAFILFVLGATGALFTTFATTVPKKFFWGLIFAGFFPNISDLPIAYIQSM 127

Query: 125 YGE--FSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLIFEQFPDTAGSIVSIHVDSDVM 182
                F+     + V   CI  +     M  F G   ++   F DT         DS+ +
Sbjct: 128 GNGSIFTAEEADKGVAYSCIFLFIQSFLMMNF-GMWRVVGLDFRDTK------EPDSENI 180

Query: 183 SLDGRTPLETDAEIKEDGKLHITVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIY 240
           +    +P   D ++ E  KL    R +NA +S+  +R +  LS N+   + +T    Y
Sbjct: 181 T-PSVSPAIDDRKLTEITKLPNITRPTNAYQSE-DARSNSDLSCNSITTNEMTPQAFY 236


>DNAK_WIGBR (Q8D2Q5) Chaperone protein dnaK (Heat shock protein 70)
           (Heat shock 70 kDa protein) (HSP70)
          Length = 645

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 17/58 (29%), Positives = 29/58 (49%), Gaps = 1/58 (1%)

Query: 171 SIVSIHVDSDVMSLDGRTPLETDAEIKEDGKLHITVRKSNASRSD-IYSRRSQGLSSN 227
           S+   ++D    ++ G   +E   +I  DG LH++ +  N+ R   I  + S GLS N
Sbjct: 457 SLGQFNLDGIAPAMRGMPQIEVTFDIDADGILHVSAKDKNSGREQKITIKASSGLSEN 514


>YA31_METJA (Q58437) Hypothetical protein MJ1031
          Length = 308

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 24/130 (18%)

Query: 11  MTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLR 70
           M  ++ + + +++ Y S K + I   +    +N  V   A+P   F  I+ N      L 
Sbjct: 4   MDVVLIVLILVLVGYFS-KIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILE 62

Query: 71  FLAADTLQKLIILCLLAIWSNFSKRGCLEWTIT-------------LFSLSTLPNTLVMG 117
           FL    L  +I LC L +       G L + +              L  +S L NT  +G
Sbjct: 63  FLK---LPVVIFLCCLFV-------GILAYLLGKHIFKLKDEKLGGLILVSMLGNTGFLG 112

Query: 118 IPLLKGMYGE 127
            P+  GM+GE
Sbjct: 113 YPVALGMFGE 122


>OAC_BPSF6 (P23214) O-acetyl transferase (EC 2.3.1.-) (O-antigen
           acetylase)
          Length = 333

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 18/109 (16%)

Query: 48  LFAVPL-------LSFHFIASNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEW 100
           +F++PL       L+F F A+   Y+ +          K+ ++ LLA+++  S    +++
Sbjct: 188 MFSIPLWLYPLRGLAFFFGATMAMYEKSWNVSNV----KITVVSLLAMYAYASYGKGIDY 243

Query: 101 TIT---LFSLSTLPNTLVMGIPLLKG----MYGEFSGSLMVQIVVLQCI 142
           T+T   L S ST+     +G PL+KG     YG +  +  VQ VV+  +
Sbjct: 244 TMTCYILVSFSTIAICTSVGDPLVKGRFDYSYGVYIYAFPVQQVVINTL 292


>TPPB_SALTY (Q8ZPM6) Tripeptide permease tppB
          Length = 501

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 34  FSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTL--QKLIILCLLAIWSN 91
           F P+Q   +N F  +   P+L+  +    +   M ++F     L     +IL L A ++N
Sbjct: 316 FEPEQYQALNPFWIIIGSPILAAIYNRMGDTLPMPMKFAIGMVLCSGAFLILPLGAKFAN 375

Query: 92  FSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
            +    + W I  + L ++   ++ G+ L
Sbjct: 376 DAGIVSVNWLIASYGLQSIGELMISGLGL 404


>NU5M_CHICK (P18940) NADH-ubiquinone oxidoreductase chain 5 (EC
           1.6.5.3)
          Length = 605

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 29/106 (27%), Positives = 47/106 (43%), Gaps = 7/106 (6%)

Query: 23  LAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKLII 82
           L    +K    FS     G+        +P L+F  I+++  +K  L FL +      +I
Sbjct: 293 LTQNDIKKIIAFSTSSQLGLMMVTIGLDLPQLAFLHISTHAFFKAML-FLCSG-----LI 346

Query: 83  LCLLAIWSNFSKRGCLEWTITLF-SLSTLPNTLVMGIPLLKGMYGE 127
           +  L    +  K GCL+ T+ +  S  T+ N  +MG P L G Y +
Sbjct: 347 IHSLNGEQDIRKMGCLQKTLPMTTSCLTIGNLALMGTPFLAGFYSK 392


>COX3_RICPR (Q9ZDX3) Probable cytochrome c oxidase polypeptide III
          (EC 1.9.3.1) (Cytochrome AA3 subunit 3)
          Length = 278

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 49 FAVPLLSFHFIASNNPYKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLE 99
          FA+ LL    I+S + YK N+  L+A  +   +I CL + W +  + G +E
Sbjct: 28 FALLLLVIGGISSMHGYKFNMYILSAGVIS--VIYCLYSWWRDVVQEGIVE 76


>ATOS_ECOLI (Q06067) Sensor protein atoS (EC 2.7.3.-)
          Length = 608

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 65  YKMNLRFLAADTLQKLIILCLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPLLKGM 124
           +KM++R +   T   LI L L+ +   FS+R      I    LSTL   +   +P L G 
Sbjct: 186 WKMDVRIIIVLTAGLLISLLLIVL---FSRRLSANIDIITDGLSTLAQNIPTRLPQLPGE 242

Query: 125 YGEFSGSL 132
            G+ S S+
Sbjct: 243 MGQISQSV 250


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.325    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,765,056
Number of Sequences: 164201
Number of extensions: 1054974
Number of successful extensions: 3322
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3298
Number of HSP's gapped (non-prelim): 22
length of query: 306
length of database: 59,974,054
effective HSP length: 110
effective length of query: 196
effective length of database: 41,911,944
effective search space: 8214741024
effective search space used: 8214741024
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)