BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138133.4 + phase: 0
(476 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PRX1_CHICK (Q91018) Homeobox prospero-like protein PROX1 (PROX 1) 34 0.72
MYSN_ACACA (P05659) Myosin II heavy chain, non muscle 33 1.6
CC37_DROVI (Q24740) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone pr... 33 1.6
VIT6_CAEEL (P18948) Vitellogenin 6 precursor 32 3.6
Y6G2_ENCCU (Q8SV63) Hypothetical protein ECU06_1620 32 4.7
RX2_BRARE (O42357) Retinal homeobox protein Rx2 32 4.7
RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7 32 4.7
PGDS_RAT (P20786) Alpha platelet-derived growth factor receptor ... 32 4.7
C5P2_MACFA (Q9BE52) CDK5 regulatory subunit associated protein 2... 32 4.7
C5P2_HUMAN (Q96SN8) CDK5 regulatory subunit associated protein 2... 32 4.7
UBP8_MOUSE (Q80U87) Ubiquitin carboxyl-terminal hydrolase 8 (EC ... 31 6.1
GOA2_RAT (Q62839) Golgi autoantigen, golgin subfamily A member 2... 31 6.1
FXO3_HUMAN (O43524) Forkhead box protein O3A (Forkhead in rhabdo... 31 6.1
TRHY_SHEEP (P22793) Trichohyalin 31 8.0
PRX1_MOUSE (P48437) Homeobox prospero-like protein PROX1 (PROX 1) 31 8.0
PFDB_PYRHO (O58268) Prefoldin beta subunit (GimC beta subunit) 31 8.0
MYS3_HUMAN (Q92794) MYST histone acetyltransferase 3 (Runt-relat... 31 8.0
IF2_AQUAE (O67825) Translation initiation factor IF-2 31 8.0
AMIR_PSEAE (P10932) Aliphatic amidase regulator 31 8.0
ALM1_SCHPO (Q9UTK5) Abnormal long morphology protein 1 (Sp8) 31 8.0
>PRX1_CHICK (Q91018) Homeobox prospero-like protein PROX1 (PROX 1)
Length = 736
Score = 34.3 bits (77), Expect = 0.72
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 390 ESREKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELEEKDELLMRDSKR 449
E++ KQ W + Q+ +++ R EQK + LK++L ++++L + E
Sbjct: 206 ENKRKQNWPQQQQQSFQQLVS--ARKEQKREERRQLKQQLEDMQKQLRQLQE-------- 255
Query: 450 ARGRRDFFARYGDSDSESDD 469
+F+ Y +DSE+D+
Sbjct: 256 -----EFYQIYDSTDSENDE 270
>MYSN_ACACA (P05659) Myosin II heavy chain, non muscle
Length = 1509
Score = 33.1 bits (74), Expect = 1.6
Identities = 20/78 (25%), Positives = 37/78 (46%), Gaps = 1/78 (1%)
Query: 392 REKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELEEKDELLMRDSKRAR 451
++K+ +A+ + E+ + LDG+ LK ++ + +R LEE + R K +
Sbjct: 1143 KQKKALEAKLTELEDQVTALDGQKNAAAAQAKTLKTQVDETKRRLEEAEASAARLEKERK 1202
Query: 452 GRRDFFARY-GDSDSESD 468
D A+ D D+E D
Sbjct: 1203 NALDEVAQLTADLDAERD 1220
>CC37_DROVI (Q24740) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone
protein kinase-targeting subunit)
Length = 399
Score = 33.1 bits (74), Expect = 1.6
Identities = 21/68 (30%), Positives = 34/68 (49%), Gaps = 4/68 (5%)
Query: 385 EHLAMESREKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELEEKD---- 440
E +A +EK+ K + + ++ + +K D + LKKEL K+ E +E D
Sbjct: 38 ERMAESEKEKEELKKKRQSYQARLINVKELISKKEGDEVALKKELEKIENEGKELDRQEN 97
Query: 441 ELLMRDSK 448
ELL R+ K
Sbjct: 98 ELLKREKK 105
>VIT6_CAEEL (P18948) Vitellogenin 6 precursor
Length = 1650
Score = 32.0 bits (71), Expect = 3.6
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 386 HLAMESREKQVWKARYNQAENLIMTLDGRDEQKT----HDNLMLKKELAKVRRELEEKDE 441
HL+ R +Q + E D +++ T + + K RE+ EK+E
Sbjct: 1466 HLSALYRNQQCGLCGHYDNEKETEFYDAENQENTIPKFAKSYLYKDSKCNYEREMFEKEE 1525
Query: 442 LLMRDSKRARGRRDFFARYGDSDSESDDAPTTSYA 476
R K +D Y +S E DD PT A
Sbjct: 1526 NFQRIEKNQEEEKDQEMNYEESRREQDDEPTEQVA 1560
>Y6G2_ENCCU (Q8SV63) Hypothetical protein ECU06_1620
Length = 579
Score = 31.6 bits (70), Expect = 4.7
Identities = 12/32 (37%), Positives = 24/32 (74%)
Query: 424 MLKKELAKVRRELEEKDELLMRDSKRARGRRD 455
M+K+ + RE+E++ + L+RD ++A+GR+D
Sbjct: 302 MIKERQRRREREIEKRVKKLLRDEEKAKGRKD 333
>RX2_BRARE (O42357) Retinal homeobox protein Rx2
Length = 327
Score = 31.6 bits (70), Expect = 4.7
Identities = 34/118 (28%), Positives = 50/118 (41%), Gaps = 25/118 (21%)
Query: 13 DLVSLRELALKV-----KSQTGFRLRYGGLLTLLRTDVEEKLVHTLVQFYDPSFRCFTFP 67
D+ S ELA+KV + Q F+ R + +EK+ ++ +D R F P
Sbjct: 161 DVYSREELAMKVNLPEVRVQVWFQNRRA------KWRRQEKMDTGTMKLHDSPIRSFNRP 214
Query: 68 DFQLVPTLEAYSNLVGL------PIAEKTP------FTGPGTSLTPLVIAKDLYLKTS 113
+ P + SN + L P++ TP F GPG SL P A +L TS
Sbjct: 215 P--MAPNVGPMSNSLPLDPWLSSPLSSATPMHSIPGFMGPGQSLQPTYTAHPGFLNTS 270
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7
Length = 318
Score = 31.6 bits (70), Expect = 4.7
Identities = 20/94 (21%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 380 QDMYQEHLAMESREKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRREL--- 436
Q++ ++ E ++K+ K R+ +AE ++ T + +KT + E KV+ +L
Sbjct: 27 QELAKKRKEQEEKQKRSKKNRFVRAETIVATTLATEREKTRIRRVRDLENQKVKNDLSHI 86
Query: 437 -EEKDELLMRDSKRARGRRDFFARYGDSDSESDD 469
++D +L + A + + D D E ++
Sbjct: 87 PSDRDFILRISEREAGSKATSESELQDVDEEDEE 120
>PGDS_RAT (P20786) Alpha platelet-derived growth factor receptor
precursor (EC 2.7.1.112) (PDGF-R-alpha)
Length = 1088
Score = 31.6 bits (70), Expect = 4.7
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 33 RYGGLLTLLRTDVEEKLVHTLVQFYDPSFRCFTFPDFQLVPT--LEAYSNLVGLPIAEKT 90
RY L L+R E+ +T++ D + +TF LVP LE + G +
Sbjct: 373 RYQSKLKLIRAKEEDSGHYTIIVQNDDDMKSYTFELSTLVPASILELVDDHHGSGGGQTV 432
Query: 91 PFTGPGTSLTPL--VIAKDLYLKTSDVS--------NHLITKSHIRG 127
T GT L + +I KD+ +D S +++IT+ H RG
Sbjct: 433 RCTAEGTPLPNIEWMICKDIKKCNNDTSWTVLASNVSNIITEFHQRG 479
>C5P2_MACFA (Q9BE52) CDK5 regulatory subunit associated protein 2
(CDK5 activator-binding protein C48) (QflA-15432)
Length = 862
Score = 31.6 bits (70), Expect = 4.7
Identities = 17/48 (35%), Positives = 26/48 (53%)
Query: 401 YNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELEEKDELLMRDSK 448
Y E + G E N+ LK E+ ++REL+E++ LL+R SK
Sbjct: 82 YFLEERMQQEFHGPAEHIYKTNIELKVEVESLKRELQERERLLIRASK 129
>C5P2_HUMAN (Q96SN8) CDK5 regulatory subunit associated protein 2
(CDK5 activator-binding protein C48)
Length = 1893
Score = 31.6 bits (70), Expect = 4.7
Identities = 16/48 (33%), Positives = 27/48 (55%)
Query: 401 YNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELEEKDELLMRDSK 448
Y E + G E N+ LK E+ ++REL+E+++LL++ SK
Sbjct: 82 YFLEERMQQEFHGPTEHIYKTNIELKVEVESLKRELQEREQLLIKASK 129
>UBP8_MOUSE (Q80U87) Ubiquitin carboxyl-terminal hydrolase 8 (EC
3.1.2.15) (Ubiquitin thiolesterase 8)
(Ubiquitin-specific processing protease 8)
(Deubiquitinating enzyme 8) (mUBPy)
Length = 1080
Score = 31.2 bits (69), Expect = 6.1
Identities = 16/45 (35%), Positives = 28/45 (61%), Gaps = 4/45 (8%)
Query: 415 DEQKTHDNLMLKKELAKVRRELEEKD----ELLMRDSKRARGRRD 455
+ ++ ++L L+ E A+VR++LEEKD E L + ++ GR D
Sbjct: 101 EAERLSESLKLRYEEAEVRKQLEEKDRREEEQLQQQKRQEMGRED 145
>GOA2_RAT (Q62839) Golgi autoantigen, golgin subfamily A member 2
(Cis-Golgi matrix protein GM130)
Length = 986
Score = 31.2 bits (69), Expect = 6.1
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 373 LPLLPTTQDMYQEHLAMESREKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKV 432
L L +D Y E+L ES +W+ R Q + L EQ+ L+ LA++
Sbjct: 374 LKQLQVERDQYAENLKGESA---MWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAEL 430
Query: 433 RRELEE 438
R ++EE
Sbjct: 431 RSQMEE 436
>FXO3_HUMAN (O43524) Forkhead box protein O3A (Forkhead in
rhabdomyosarcoma-like 1) (AF6q21 protein)
Length = 673
Score = 31.2 bits (69), Expect = 6.1
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 290 MKSKPISLATSP-EFFFYTNAPTGQRKAFMDAWSKVRRKSVKHLGVRSGIAHEAYTQWVI 348
+++ P S SP + + +PT + +DAW+ R ++ + SG +
Sbjct: 274 LQTAPESADDSPSQLSKWPGSPTSRSSDELDAWTDFRSRTNSNASTVSGRLSPIMASTEL 333
Query: 349 DRAEEIGMPYPAMRYVSSS--TPSMPLPL---LPTTQDM 382
D ++ P M Y SS+ +PS+ P LP DM
Sbjct: 334 DEVQDDDAPLSPMLYSSSASLSPSVSKPCTVELPRLTDM 372
>TRHY_SHEEP (P22793) Trichohyalin
Length = 1549
Score = 30.8 bits (68), Expect = 8.0
Identities = 15/66 (22%), Positives = 33/66 (49%)
Query: 390 ESREKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELEEKDELLMRDSKR 449
+ RE+Q + Q E + + ++ + L+KEL + L+E+++LL + ++
Sbjct: 614 QERERQYLEKVELQEEEQVQRQEREKRRQERERQYLEKELQRQEERLQEEEQLLREEREK 673
Query: 450 ARGRRD 455
R R+
Sbjct: 674 RRQERE 679
>PRX1_MOUSE (P48437) Homeobox prospero-like protein PROX1 (PROX 1)
Length = 737
Score = 30.8 bits (68), Expect = 8.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 390 ESREKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELEEKDELLMRDSKR 449
E++ KQ K Q ++ + R EQK + LK++L ++++L + E
Sbjct: 206 ENKRKQ--KLPQQQQQSFQQLVSARKEQKREERRQLKQQLEDMQKQLRQLQE-------- 255
Query: 450 ARGRRDFFARYGDSDSESDD 469
F+ Y +DSE+D+
Sbjct: 256 -----KFYQVYDSTDSENDE 270
>PFDB_PYRHO (O58268) Prefoldin beta subunit (GimC beta subunit)
Length = 117
Score = 30.8 bits (68), Expect = 8.0
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 381 DMYQEHLAMESREKQVWKARYNQAENLIMTL----DGRDEQKTHDNLMLKKELAKVRREL 436
D YQ+ L + ++KQ +A N+A+ + + D KT L++K K +EL
Sbjct: 16 DTYQQQLQLVIQQKQKVQADLNEAKKALEEIETLPDDAQIYKTVGTLIVKTTKEKAVQEL 75
Query: 437 EEKDELL 443
+EK E L
Sbjct: 76 KEKIETL 82
>MYS3_HUMAN (Q92794) MYST histone acetyltransferase 3 (Runt-related
transcription factor binding protein 2) (Monocytic
leukemia zinc finger protein) (Zinc finger protein 220)
Length = 2004
Score = 30.8 bits (68), Expect = 8.0
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 367 STPSMPLPLLPTTQDMYQEHLAMES-REKQVWKARYNQAENLIMTLDGRDEQKTHDNLML 425
ST L PT +D+ +E ES + + K+R + LD +EQ +HD ++
Sbjct: 1326 STKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTSVV 1385
Query: 426 KKELAKVRRELEE----KDELL 443
+++A + EE K+EL+
Sbjct: 1386 SEQMAGSEDDHEEDSHTKEELI 1407
>IF2_AQUAE (O67825) Translation initiation factor IF-2
Length = 805
Score = 30.8 bits (68), Expect = 8.0
Identities = 15/73 (20%), Positives = 38/73 (51%)
Query: 378 TTQDMYQEHLAMESREKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELE 437
+ +++ +E L + +EK+ K + E + ++ + E++ + KKE K + ++
Sbjct: 127 SVEELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMS 186
Query: 438 EKDELLMRDSKRA 450
+K+ +MR + A
Sbjct: 187 KKEREIMRKLEHA 199
>AMIR_PSEAE (P10932) Aliphatic amidase regulator
Length = 196
Score = 30.8 bits (68), Expect = 8.0
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 373 LPLLPTTQDMYQEHLAMESREKQVWK-----ARYNQAENLIMTLDGRDEQKTHDNL---- 423
LP+L + + + +E ++ + +Q+ + AR NQA+ L+M G DE++ H L
Sbjct: 116 LPVLVSARRISEEMAKLKQKTEQLQERIAGQARINQAKALLMQRHGWDEREAHQYLSREA 175
Query: 424 MLKKE-LAKVRREL 436
M ++E + K+ +EL
Sbjct: 176 MKRREPILKIAQEL 189
>ALM1_SCHPO (Q9UTK5) Abnormal long morphology protein 1 (Sp8)
Length = 1727
Score = 30.8 bits (68), Expect = 8.0
Identities = 18/46 (39%), Positives = 29/46 (62%), Gaps = 3/46 (6%)
Query: 393 EKQVWKARYNQAENLIMTLDGRDEQKTHDNLMLKKELAKVRRELEE 438
E+QV ++ Q +N+ L+ R++ K ML+K LA+VR ELE+
Sbjct: 1616 EEQVAQSHQKQLDNIRKELEMRNKLKLS---MLEKNLARVRAELEQ 1658
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,170,352
Number of Sequences: 164201
Number of extensions: 2588683
Number of successful extensions: 7034
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 7018
Number of HSP's gapped (non-prelim): 29
length of query: 476
length of database: 59,974,054
effective HSP length: 114
effective length of query: 362
effective length of database: 41,255,140
effective search space: 14934360680
effective search space used: 14934360680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC138133.4