Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC138133.3 - phase: 0 /pseudo
         (430 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

LTS2_HUMAN (Q9NRM7) Serine/threonine protein kinase LATS2 (EC 2....    33  1.4
PHA2_YEAST (P32452) Prephenate dehydratase (EC 4.2.1.51) (PDT)         31  7.0
PGH1_BOVIN (O62664) Prostaglandin G/H synthase 1 (EC 1.14.99.1) ...    31  7.0
Y831_METJA (Q58241) Hypothetical protein MJ0831                        30  9.2
TIE1_BOVIN (Q06805) Tyrosine-protein kinase receptor Tie-1 precu...    30  9.2
PGH1_SHEEP (P05979) Prostaglandin G/H synthase 1 precursor (EC 1...    30  9.2

>LTS2_HUMAN (Q9NRM7) Serine/threonine protein kinase LATS2 (EC
           2.7.1.37) (Large tumor suppressor homolog 2)
           (Serine/threonine kinase kpm) (Kinase phosphorylated
           during mitosis protein) (Warts-like kinase)
          Length = 1088

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 17/103 (16%)

Query: 316 DTWRVADGYVLWYARVSHPQILPPIPRDLPRPANEEQIIAEQWQRY-----EARSSPDTY 370
           D W V  G +L+   V  P  L P P        E Q+    W+       + + SP+  
Sbjct: 895 DWWSV--GVILFEMLVGQPPFLAPTP-------TETQLKVINWENTLHIPAQVKLSPEAR 945

Query: 371 DMVSGVVAYADAQLGQEEVMSMTPQQWFEAM---THMREQIAP 410
           D+++ +   AD +LG+     +    +F A+   + +R+Q AP
Sbjct: 946 DLITKLCCSADHRLGRNGADDLKAHPFFSAIDFSSDIRKQPAP 988


>PHA2_YEAST (P32452) Prephenate dehydratase (EC 4.2.1.51) (PDT)
          Length = 368

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 39/165 (23%), Positives = 67/165 (39%), Gaps = 35/165 (21%)

Query: 252 IMCGVRRVYRHLPERVLRQYGYVQTIPRHPTDVRDLPPPSIVQMF--------VDFGTHT 303
           +  G +  Y H  +  L+Q+       +  +DV  LP  SI Q F        +D+    
Sbjct: 43  LFLGPKGTYSH--QAALQQF-------QSTSDVEYLPAASIPQCFNQLENDTSIDYSVVP 93

Query: 304 LKADARGEQAGEDTWRVADGYVLWYARVSHPQILPPIPRDLPRPANEEQIIAEQWQRYEA 363
           L+    G+        V   Y L   R+    +  P P D  R   + ++IAEQ+     
Sbjct: 94  LENSTNGQ--------VVFSYDLLRDRMIKKALSLPAPADTNRITPDIEVIAEQY----- 140

Query: 364 RSSPDTYDMVSGV-VAYADAQLG--QEEVMSMTPQQWFEAMTHMR 405
              P T+ ++S + +    A LG  +E ++   PQ W +   ++R
Sbjct: 141 --VPITHCLISPIQLPNGIASLGNFEEVIIHSHPQVWGQVECYLR 183


>PGH1_BOVIN (O62664) Prostaglandin G/H synthase 1 (EC 1.14.99.1)
           (Cyclooxygenase-1) (COX-1) (Prostaglandin-endoperoxide
           synthase 1) (Prostaglandin H2 synthase 1) (PGH synthase
           1) (PGHS-1) (PHS 1) (Fragment)
          Length = 259

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)

Query: 317 TWRVADGYVLW--YARVSH-PQILPPIPRDLPRP 347
           T+ VA  Y+ W  ++ VS+  +ILP +PRD P P
Sbjct: 9   TYNVAHDYISWESFSNVSYYTRILPSVPRDCPTP 42


>Y831_METJA (Q58241) Hypothetical protein MJ0831
          Length = 432

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 10/28 (35%), Positives = 18/28 (63%)

Query: 256 VRRVYRHLPERVLRQYGYVQTIPRHPTD 283
           + +V + + E++L  YGY++ I  H TD
Sbjct: 8   IEKVTKAIKEKILNHYGYIRVITHHDTD 35


>TIE1_BOVIN (Q06805) Tyrosine-protein kinase receptor Tie-1
           precursor (EC 2.7.1.112)
          Length = 1136

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 20/50 (40%), Positives = 24/50 (48%)

Query: 329 ARVSHPQILPPIPRDLPRPANEEQIIAEQWQRYEARSSPDTYDMVSGVVA 378
           ARV  P   PP PR L   A  +  I   WQR EA + P +  +V   VA
Sbjct: 633 ARVLLPPSGPPAPRHLHAQALSDSEIQLMWQRPEAAAGPISKYIVEVQVA 682


>PGH1_SHEEP (P05979) Prostaglandin G/H synthase 1 precursor (EC
           1.14.99.1) (Cyclooxygenase -1) (COX-1)
           (Prostaglandin-endoperoxide synthase 1) (Prostaglandin
           H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1)
          Length = 600

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)

Query: 317 TWRVADGYVLW--YARVSH-PQILPPIPRDLPRP 347
           T+ +A  Y+ W  ++ VS+  +ILP +PRD P P
Sbjct: 129 TYNIAHDYISWESFSNVSYYTRILPSVPRDCPTP 162


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.140    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,830,491
Number of Sequences: 164201
Number of extensions: 2429447
Number of successful extensions: 6355
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6352
Number of HSP's gapped (non-prelim): 7
length of query: 430
length of database: 59,974,054
effective HSP length: 113
effective length of query: 317
effective length of database: 41,419,341
effective search space: 13129931097
effective search space used: 13129931097
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)


Medicago: description of AC138133.3