BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138131.5 + phase: 0 /partial
(155 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RS11_SOYBN (P17093) 40S ribosomal protein S11 300 8e-82
R11A_ARATH (P16181) 40S ribosomal protein S11-1 299 1e-81
RS11_MAIZE (P25460) 40S ribosomal protein S11 295 2e-80
R11C_ARATH (P42733) 40S ribosomal protein S11-3 290 9e-79
R11B_ARATH (O65569) 40S ribosomal protein S11-2 287 7e-78
RS11_DUNTE (P42756) 40S ribosomal protein S11 227 9e-60
RS11_XENLA (P41115) 40S ribosomal protein S11 192 2e-49
RS11_SCHPO (P79013) 40S ribosomal protein S11 188 4e-48
RS11_RAT (P62282) 40S ribosomal protein S11 187 6e-48
RS11_MOUSE (P62281) 40S ribosomal protein S11 187 6e-48
RS11_MACFA (P61270) 40S ribosomal protein S11 (QnpA-10190) 187 6e-48
RS11_HUMAN (P62280) 40S ribosomal protein S11 187 6e-48
RS11_YEAST (P26781) 40S ribosomal protein S11 (S18) (YS12) (RP41) 182 2e-46
RS11_ANOGA (P52812) 40S ribosomal protein S11 146 2e-35
RS17_PYRHO (O59426) 30S ribosomal protein S17P 99 5e-21
RS17_PYRAB (Q9V1U5) 30S ribosomal protein S17P 99 5e-21
RS17_HALN1 (O24786) 30S ribosomal protein S17 (HHAS17) 97 1e-20
RS17_METTH (O26120) 30S ribosomal protein S17P 95 5e-20
RS17_SULSO (Q9UX98) 30S ribosomal protein S17P 94 1e-19
RS17_METJA (P54036) 30S ribosomal protein S17P 91 8e-19
>RS11_SOYBN (P17093) 40S ribosomal protein S11
Length = 159
Score = 300 bits (768), Expect = 8e-82
Identities = 145/155 (93%), Positives = 152/155 (97%), Gaps = 1/155 (0%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
TEKAFLKQPKVFL +KK+GKGKRPGKGGNRF+KS+GLGFKTPREAI+GTYIDKKCPFTGN
Sbjct: 5 TEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGN 64
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 120
VSIRGRILAGTCHSAKMNRTI+VRRNYLHFIKKYQRYEKRHSNIPAH+SP FRVKEGDHV
Sbjct: 65 VSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHV 124
Query: 121 IIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTG 155
IIGQCRPLSKTVRFNVLKVIPAGSSSGA KKAFTG
Sbjct: 125 IIGQCRPLSKTVRFNVLKVIPAGSSSGA-KKAFTG 158
>R11A_ARATH (P16181) 40S ribosomal protein S11-1
Length = 160
Score = 299 bits (766), Expect = 1e-81
Identities = 141/155 (90%), Positives = 149/155 (95%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
TEKAFLKQPKVFL SKKSGKGKRPGKGGNRF+K++GLGFKTPREAIDG Y+DKKCPFTG
Sbjct: 5 TEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCPFTGT 64
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 120
VSIRGRILAGTCHSAKM RTI+VRR+YLHF+KKYQRYEKRHSNIPAHVSPCFRVKEGDH+
Sbjct: 65 VSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHI 124
Query: 121 IIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTG 155
IIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFTG
Sbjct: 125 IIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTG 159
>RS11_MAIZE (P25460) 40S ribosomal protein S11
Length = 159
Score = 295 bits (756), Expect = 2e-80
Identities = 140/154 (90%), Positives = 151/154 (97%), Gaps = 1/154 (0%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
TEKAFLKQPKVFL SKKSGKGK+PGKGGNRF+KS+GLGFKTPREAI+GTYIDKKCPFTG
Sbjct: 5 TEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 64
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 120
VSIRGRI+AGTCHSAKMNRTI+VRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGDHV
Sbjct: 65 VSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHV 124
Query: 121 IIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFT 154
IIGQCRPLSKTVRFNV+KVIPAGS++ AGKKAFT
Sbjct: 125 IIGQCRPLSKTVRFNVVKVIPAGSAA-AGKKAFT 157
>R11C_ARATH (P42733) 40S ribosomal protein S11-3
Length = 159
Score = 290 bits (742), Expect = 9e-79
Identities = 140/155 (90%), Positives = 147/155 (94%), Gaps = 1/155 (0%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
TEKAFLKQPKVFL SK SGKGKRPGKGGNRF+K++GLGFKTPREAIDG YID KCPFTG
Sbjct: 5 TEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCPFTGT 64
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 120
VSIRGRILAGTCHSAKM RTI+VRRNYLHF+KKYQRYEKRHSNIPAHVSPCFRVKEGDHV
Sbjct: 65 VSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 124
Query: 121 IIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTG 155
IIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAFTG
Sbjct: 125 IIGQCRPLSKTVRFNVLKVIPAGASA-FGKKAFTG 158
>R11B_ARATH (O65569) 40S ribosomal protein S11-2
Length = 159
Score = 287 bits (734), Expect = 7e-78
Identities = 138/155 (89%), Positives = 148/155 (95%), Gaps = 1/155 (0%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
TEKAFLKQPKVFL SKKSGKGKRPGKGGNRF+K++GLGFKTPREAI+GTYID+KCPFTG
Sbjct: 5 TEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCPFTGT 64
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 120
VSIRGRIL+GTCHSAKM RTI+VRR+YLHF+KKY+RYEKRHSNIPAHVSPCFRVKEGD V
Sbjct: 65 VSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKEGDRV 124
Query: 121 IIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTG 155
IGQCRPLSKTVRFNVLKVIPAGSSS GKKAFTG
Sbjct: 125 TIGQCRPLSKTVRFNVLKVIPAGSSS-IGKKAFTG 158
>RS11_DUNTE (P42756) 40S ribosomal protein S11
Length = 157
Score = 227 bits (578), Expect = 9e-60
Identities = 112/155 (72%), Positives = 127/155 (81%), Gaps = 3/155 (1%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
TEKAF KQ V C K K K PGK G+RFFK+VGL FKTP+EAIDG Y+DKKCPFTGN
Sbjct: 5 TEKAFQKQVGVTGCFKSKEK-KAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCPFTGN 63
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 120
VSIRGRIL G S+KM RTI+VRR+YLHFI KY RYEKRH+NIPAHVSPCFRV++GD V
Sbjct: 64 VSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFRVRDGDTV 123
Query: 121 IIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTG 155
IIGQCRPLSKT+RFNVL+VIP + GKK+F+G
Sbjct: 124 IIGQCRPLSKTIRFNVLRVIP--QAGATGKKSFSG 156
>RS11_XENLA (P41115) 40S ribosomal protein S11
Length = 158
Score = 192 bits (488), Expect = 2e-49
Identities = 93/146 (63%), Positives = 115/146 (78%), Gaps = 1/146 (0%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
TE+A+ KQP +F K+ +G+ + R+++SVGLGFKTPREAIDGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKCPFTGN 65
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFR-VKEGDH 119
VSIRGRIL+G KM RTIV+RR+YLH+I+KY R+EKRH N+ H+SPCFR V+ GD
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGDT 125
Query: 120 VIIGQCRPLSKTVRFNVLKVIPAGSS 145
V +G+CRPLSKTVRFNVLKV A +
Sbjct: 126 VTVGECRPLSKTVRFNVLKVTKAAGT 151
>RS11_SCHPO (P79013) 40S ribosomal protein S11
Length = 152
Score = 188 bits (478), Expect = 4e-48
Identities = 91/140 (65%), Positives = 106/140 (75%), Gaps = 8/140 (5%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
+E+AF KQP +F +KK G R++K VGLGFKTP EAI G Y+DKKCPF G
Sbjct: 9 SERAFQKQPHIFQNAKKGA--------GRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQ 60
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 120
VSIRGRIL GT S KM+RTI++RR YLHFI KY RYEKRH N+ AHVSP FR+ EGD V
Sbjct: 61 VSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVV 120
Query: 121 IIGQCRPLSKTVRFNVLKVI 140
+GQCRPLSKTVRFNVL+V+
Sbjct: 121 TVGQCRPLSKTVRFNVLRVV 140
>RS11_RAT (P62282) 40S ribosomal protein S11
Length = 158
Score = 187 bits (476), Expect = 6e-48
Identities = 93/151 (61%), Positives = 116/151 (76%), Gaps = 11/151 (7%)
Query: 1 TEKAFLKQPKVFLCSKK-----SGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKC 55
TE+A+ KQP +F K+ +GK K P R++K++GLGFKTP+EAI+GTYIDKKC
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLP-----RYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 56 PFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFR-V 114
PFTGNVSIRGRIL+G KM RTIV+RR+YLH+I+KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 115 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 145
+ GD V +G+CRPLSKTVRFNVLKV A +
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGT 151
>RS11_MOUSE (P62281) 40S ribosomal protein S11
Length = 158
Score = 187 bits (476), Expect = 6e-48
Identities = 93/151 (61%), Positives = 116/151 (76%), Gaps = 11/151 (7%)
Query: 1 TEKAFLKQPKVFLCSKK-----SGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKC 55
TE+A+ KQP +F K+ +GK K P R++K++GLGFKTP+EAI+GTYIDKKC
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLP-----RYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 56 PFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFR-V 114
PFTGNVSIRGRIL+G KM RTIV+RR+YLH+I+KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 115 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 145
+ GD V +G+CRPLSKTVRFNVLKV A +
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGT 151
>RS11_MACFA (P61270) 40S ribosomal protein S11 (QnpA-10190)
Length = 158
Score = 187 bits (476), Expect = 6e-48
Identities = 93/151 (61%), Positives = 116/151 (76%), Gaps = 11/151 (7%)
Query: 1 TEKAFLKQPKVFLCSKK-----SGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKC 55
TE+A+ KQP +F K+ +GK K P R++K++GLGFKTP+EAI+GTYIDKKC
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLP-----RYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 56 PFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFR-V 114
PFTGNVSIRGRIL+G KM RTIV+RR+YLH+I+KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 115 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 145
+ GD V +G+CRPLSKTVRFNVLKV A +
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGT 151
>RS11_HUMAN (P62280) 40S ribosomal protein S11
Length = 158
Score = 187 bits (476), Expect = 6e-48
Identities = 93/151 (61%), Positives = 116/151 (76%), Gaps = 11/151 (7%)
Query: 1 TEKAFLKQPKVFLCSKK-----SGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKC 55
TE+A+ KQP +F K+ +GK K P R++K++GLGFKTP+EAI+GTYIDKKC
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLP-----RYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 56 PFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFR-V 114
PFTGNVSIRGRIL+G KM RTIV+RR+YLH+I+KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 115 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 145
+ GD V +G+CRPLSKTVRFNVLKV A +
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGT 151
>RS11_YEAST (P26781) 40S ribosomal protein S11 (S18) (YS12) (RP41)
Length = 155
Score = 182 bits (463), Expect = 2e-46
Identities = 92/150 (61%), Positives = 112/150 (74%), Gaps = 10/150 (6%)
Query: 1 TEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGN 60
+E+AF KQP +F K + K R++K+ GLGFKTP+ AI+G+YIDKKCPFTG
Sbjct: 8 SERAFQKQPHIFNNPKV-----KTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGL 62
Query: 61 VSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHV 120
VSIRG+IL GT S KM+RTIV+RR YLH+I KY RYEKRH N+P HVSP FRV+ GD V
Sbjct: 63 VSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIV 122
Query: 121 IIGQCRPLSKTVRFNVLKVIPAGSSSGAGK 150
+GQCRP+SKTVRFNV+KV S+ AGK
Sbjct: 123 TVGQCRPISKTVRFNVVKV-----SAAAGK 147
>RS11_ANOGA (P52812) 40S ribosomal protein S11
Length = 151
Score = 146 bits (369), Expect = 2e-35
Identities = 82/153 (53%), Positives = 101/153 (65%), Gaps = 12/153 (7%)
Query: 3 KAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCPFTGNVS 62
+AF KQ + L K + K G R S+GLGFKTP+EAI GTYIDKKCPFTG++S
Sbjct: 8 RAFQKQLGINLNRKNVSRKK-----GLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHIS 62
Query: 63 IRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFR-VKEGDHVI 121
IRGRIL G K + +RR+YL FI+KY +EKR+ N+ H+SPCFR V+ GD V
Sbjct: 63 IRGRILTGVVR--KCIVLLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVEAGDIVT 120
Query: 122 IGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFT 154
+G+CRPLSKTVRFNVLK S KK F+
Sbjct: 121 LGECRPLSKTVRFNVLK----ESKMAGSKKKFS 149
>RS17_PYRHO (O59426) 30S ribosomal protein S17P
Length = 116
Score = 98.6 bits (244), Expect = 5e-21
Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 30 RFFKSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLH 89
+ + +GL + P E D D KCP+ G++ I GR+ G S K +T+ V R Y H
Sbjct: 3 KMVRDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYH 58
Query: 90 FIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 140
++KKY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 YLKKYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 109
>RS17_PYRAB (Q9V1U5) 30S ribosomal protein S17P
Length = 116
Score = 98.6 bits (244), Expect = 5e-21
Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 30 RFFKSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLH 89
+ + +GL + P E D D KCP+ G++ I GR+ G S K +T+ V R Y H
Sbjct: 3 KMVRDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYH 58
Query: 90 FIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 140
++KKY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 YLKKYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 109
>RS17_HALN1 (O24786) 30S ribosomal protein S17 (HHAS17)
Length = 109
Score = 97.4 bits (241), Expect = 1e-20
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 34 SVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKK 93
++GL P +GT D+ CPF GN+S+RG++L G S M +T+VV R Y F+ K
Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57
Query: 94 YQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 145
Y RY KR S +PAH CF + GD V I + RPLSKT V+++ G +
Sbjct: 58 YDRYMKRRSRVPAHAPECFDISVGDTVSIAETRPLSKTKSHVVVEITDGGDA 109
>RS17_METTH (O26120) 30S ribosomal protein S17P
Length = 106
Score = 95.1 bits (235), Expect = 5e-20
Identities = 46/88 (52%), Positives = 59/88 (66%)
Query: 52 DKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPC 111
D CPF G++ +RG+IL GT S K RT+ V R++ FI+KY+RYEKR S I AH C
Sbjct: 15 DPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKYERYEKRKSKIKAHKPDC 74
Query: 112 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 139
V+ GD V I +CRPLSKT F V++V
Sbjct: 75 IDVRVGDTVKIAECRPLSKTKNFVVVEV 102
>RS17_SULSO (Q9UX98) 30S ribosomal protein S17P
Length = 114
Score = 94.0 bits (232), Expect = 1e-19
Identities = 42/86 (48%), Positives = 58/86 (66%)
Query: 52 DKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPC 111
D+ CP+ G++ +RG L G + + V+ R YL++ KY+RYE+R S I AHV PC
Sbjct: 25 DEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAHVPPC 84
Query: 112 FRVKEGDHVIIGQCRPLSKTVRFNVL 137
V+EGD VIIG+CRPLSK++ F VL
Sbjct: 85 INVREGDKVIIGECRPLSKSISFVVL 110
>RS17_METJA (P54036) 30S ribosomal protein S17P
Length = 117
Score = 91.3 bits (225), Expect = 8e-19
Identities = 41/106 (38%), Positives = 66/106 (61%), Gaps = 4/106 (3%)
Query: 33 KSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIK 92
+++G+ K P D DK CPF GN+ +RG+ G S K ++T++++R + +IK
Sbjct: 4 RNIGIQVKAPEVECD----DKNCPFHGNLPVRGQSFVGVVVSDKPHKTVIIKREVVKYIK 59
Query: 93 KYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 138
KY+RYE+R + + AH PC + GD V + +CRP+SKT F V++
Sbjct: 60 KYERYERRTTKLAAHNPPCIHARVGDIVRVMECRPISKTKAFVVVE 105
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.139 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,730,673
Number of Sequences: 164201
Number of extensions: 840847
Number of successful extensions: 1484
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1421
Number of HSP's gapped (non-prelim): 65
length of query: 155
length of database: 59,974,054
effective HSP length: 101
effective length of query: 54
effective length of database: 43,389,753
effective search space: 2343046662
effective search space used: 2343046662
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC138131.5