BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138130.16 + phase: 0
(425 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NTC1_HUMAN (P46531) Neurogenic locus notch homolog protein 1 pre... 52 4e-06
NTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precu... 51 6e-06
NTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precu... 49 3e-05
NTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 pre... 49 3e-05
NTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pre... 49 3e-05
NOTC_XENLA (P21783) Neurogenic locus notch protein homolog precu... 49 3e-05
KBF1_RAT (Q63369) Nuclear factor NF-kappa-B p105 subunit (DNA-bi... 46 2e-04
CDN6_HUMAN (P42773) Cyclin-dependent kinase 6 inhibitor (p18-INK... 46 2e-04
NTC1_BRARE (P46530) Neurogenic locus notch homolog protein 1 pre... 45 3e-04
NTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 pre... 44 0.001
CDN6_MOUSE (Q60772) Cyclin-dependent kinase 6 inhibitor (p18-INK... 44 0.001
NTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 pre... 43 0.001
KBF1_CHICK (Q04861) Nuclear factor NF-kappa-B p105 subunit [Cont... 43 0.001
KBF1_MOUSE (P25799) Nuclear factor NF-kappa-B p105 subunit (DNA-... 42 0.003
NTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 precu... 41 0.005
NTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 pre... 41 0.005
NOTC_DROME (P07207) Neurogenic locus Notch protein precursor 41 0.005
AFY1_HUMAN (Q9P2R3) Ankyrin repeat and FYVE domain protein 1 (An... 40 0.009
IKBB_RAT (Q9JIA3) NF-kappaB inhibitor beta (NF-kappa-BIB) (I-kap... 40 0.011
AFY1_MOUSE (Q810B6) Ankyrin repeat and FYVE domain protein 1 (An... 40 0.011
>NTC1_HUMAN (P46531) Neurogenic locus notch homolog protein 1
precursor (Notch 1) (hN1) (Translocation-associated notch
protein TAN-1)
Length = 2556
Score = 51.6 bits (122), Expect = 4e-06
Identities = 31/95 (32%), Positives = 45/95 (46%), Gaps = 3/95 (3%)
Query: 6 SILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSV 65
+++ DF+ A+ + R ET HLA RY DA L++ S N+ QD G +
Sbjct: 1909 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI---QDNMGRTP 1965
Query: 66 LHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
LH AVS + LI D++ R +G T L
Sbjct: 1966 LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 2000
>NTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor
(Notch 1)
Length = 2531
Score = 50.8 bits (120), Expect = 6e-06
Identities = 30/95 (31%), Positives = 45/95 (46%), Gaps = 3/95 (3%)
Query: 6 SILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSV 65
+++ DF+ A+ + R ET HLA RY DA L++ S N+ QD G +
Sbjct: 1898 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI---QDNMGRTP 1954
Query: 66 LHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
LH AVS + L+ D++ R +G T L
Sbjct: 1955 LHAAVSADAQGVFQILLRNRATDLDARMHDGTTPL 1989
>NTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor
(Notch 3)
Length = 2319
Score = 48.5 bits (114), Expect = 3e-05
Identities = 32/95 (33%), Positives = 42/95 (43%), Gaps = 3/95 (3%)
Query: 6 SILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSV 65
SI+ D + A R ET HLA RY DA L+ TN QD G +
Sbjct: 1821 SIISDLICQGAQLGARTDRTGETALHLAARYARADAAKRLLDAGADTN---AQDHSGRTP 1877
Query: 66 LHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
LH AV+ + LI D++ R ++G TAL
Sbjct: 1878 LHTAVTADAQGVFQILIRNRSTDLDARMADGSTAL 1912
>NTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3
precursor (Notch 3)
Length = 2318
Score = 48.5 bits (114), Expect = 3e-05
Identities = 32/95 (33%), Positives = 42/95 (43%), Gaps = 3/95 (3%)
Query: 6 SILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSV 65
SI+ D + A R ET HLA RY DA L+ TN QD G +
Sbjct: 1820 SIISDLICQGAQLGARTDRTGETALHLAARYARADAAKRLLDAGADTN---AQDHSGRTP 1876
Query: 66 LHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
LH AV+ + LI D++ R ++G TAL
Sbjct: 1877 LHTAVTADAQGVFQILIRNRSTDLDARMADGSTAL 1911
>NTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3
precursor (Notch 3)
Length = 2321
Score = 48.5 bits (114), Expect = 3e-05
Identities = 32/95 (33%), Positives = 42/95 (43%), Gaps = 3/95 (3%)
Query: 6 SILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSV 65
SI+ D + A R ET HLA RY DA L+ TN QD G +
Sbjct: 1819 SIISDLICQGAQLGARTDRTGETALHLAARYARADAAKRLLDAGADTN---AQDHSGRTP 1875
Query: 66 LHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
LH AV+ + LI D++ R ++G TAL
Sbjct: 1876 LHTAVTADAQGVFQILIRNRSTDLDARMADGSTAL 1910
>NOTC_XENLA (P21783) Neurogenic locus notch protein homolog precursor
(XOTCH protein)
Length = 2524
Score = 48.5 bits (114), Expect = 3e-05
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 2 NGKVSILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRY 61
+ +++ DF+ A + R ET HLA RY DA L++ S N+ QD
Sbjct: 1901 DASANMISDFIGQGAQLHNQTDRTGETALHLAARYARADAAKRLLESSADANV---QDNM 1957
Query: 62 GNSVLHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
G + LH AV+ + LI D++ R +G T L
Sbjct: 1958 GRTPLHAAVAADAQGVFQILIRNRATDLDARMFDGTTPL 1996
>KBF1_RAT (Q63369) Nuclear factor NF-kappa-B p105 subunit
(DNA-binding factor KBF1) (EBP-1) [Contains: Nuclear
factor NF-kappa-B p50 subunit] (Fragment)
Length = 522
Score = 46.2 bits (108), Expect = 2e-04
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 27 ETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGRHKMTDFLINKTK 86
+T HLAV D + L++V +LL DR+GNSVLHLA G K+ L+ +K
Sbjct: 130 QTPLHLAVITKQEDVVEDLLRVGADLSLL---DRWGNSVLHLAAKEGHDKILGVLLKNSK 186
Query: 87 --LDINTRNSEGMTALDI 102
L IN N EG+ A+ I
Sbjct: 187 AALLINHPNGEGLNAIHI 204
>CDN6_HUMAN (P42773) Cyclin-dependent kinase 6 inhibitor (p18-INK6)
(Cyclin-dependent kinase 4 inhibitor C) (p18-INK4c)
Length = 168
Score = 45.8 bits (107), Expect = 2e-04
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 29 VFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGRHKMTDFLINKTKLD 88
V H A R G D L L++ N+ +D GN LHLA G ++ +FL+ T +
Sbjct: 73 VIHDAARAGFLDTLQTLLEFQADVNI---EDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 89 INTRNSEGMTALDI 102
+ RN +G TA D+
Sbjct: 130 VGHRNHKGDTACDL 143
>NTC1_BRARE (P46530) Neurogenic locus notch homolog protein 1
precursor
Length = 2437
Score = 45.4 bits (106), Expect = 3e-04
Identities = 29/94 (30%), Positives = 42/94 (43%), Gaps = 3/94 (3%)
Query: 7 ILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVL 66
++ DF+ A + R ET HLA RY DA L++ N+ QD G + L
Sbjct: 1897 VITDFIYHGANLHNQTDRTGETALHLAARYARSDAAKRLLESCADANV---QDNMGRTPL 1953
Query: 67 HLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
H AV+ + LI D++ R +G T L
Sbjct: 1954 HAAVAADAQGVFQILIRNRATDLDARMHDGTTPL 1987
>NTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1
precursor (Notch 1) (Motch A) (mT14) (p300)
Length = 2531
Score = 43.5 bits (101), Expect = 0.001
Identities = 29/95 (30%), Positives = 43/95 (44%), Gaps = 4/95 (4%)
Query: 6 SILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSV 65
+++ DF+ A+ + R ET HLA RY D L + S N+ QD G +
Sbjct: 1898 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDRRKRL-EASADANI---QDNMGRTP 1953
Query: 66 LHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
LH AVS + L+ D++ R +G T L
Sbjct: 1954 LHAAVSADAQGVFQILLRNRATDLDARMHDGTTPL 1988
>CDN6_MOUSE (Q60772) Cyclin-dependent kinase 6 inhibitor (p18-INK6)
(Cyclin-dependent kinase 4 inhibitor C) (p18-INK4c)
Length = 168
Score = 43.5 bits (101), Expect = 0.001
Identities = 25/74 (33%), Positives = 37/74 (49%), Gaps = 3/74 (4%)
Query: 29 VFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGRHKMTDFLINKTKLD 88
V H A R G D + L++ N+ +D GN LHLA G + +FL+ T +
Sbjct: 73 VIHDAARAGFLDTVQALLEFQADVNI---EDNEGNLPLHLAAKEGHLPVVEFLMKHTACN 129
Query: 89 INTRNSEGMTALDI 102
+ RN +G TA D+
Sbjct: 130 VGHRNHKGDTAFDL 143
>NTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2
precursor (Notch 2) (Motch B)
Length = 2470
Score = 43.1 bits (100), Expect = 0.001
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 2 NGKVSILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRY 61
+ +I+ D V A+ R E HLA RY DA L+ N QD
Sbjct: 1851 DSSANIITDLVYQGASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADRN---AQDNM 1907
Query: 62 GNSVLHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
G LH AV+G + LI D++ R ++G T L
Sbjct: 1908 GRCPLHAAVAGDAQGVFQILIRNRVTDLDARMNDGTTPL 1946
>KBF1_CHICK (Q04861) Nuclear factor NF-kappa-B p105 subunit
[Contains: Nuclear factor NF-kappa-B p50 subunit]
Length = 984
Score = 43.1 bits (100), Expect = 0.001
Identities = 28/79 (35%), Positives = 43/79 (53%), Gaps = 5/79 (6%)
Query: 27 ETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGRHKMTDFLINKTK 86
+T HLAV + + L++ NLL DR+GNSVLHLA + G K+ L+ K
Sbjct: 581 QTPLHLAVITKQAEVVEDLLKAGANVNLL---DRHGNSVLHLAAAEGDDKILSLLLKHQK 637
Query: 87 LD--INTRNSEGMTALDIL 103
I+ N EG++A+ ++
Sbjct: 638 ASSMIDLSNGEGLSAIHMV 656
Score = 31.6 bits (70), Expect = 4.0
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 4 KVSILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGN 63
+ +++D + + A+ + L R +V HLA G L L++ ++++ + G
Sbjct: 592 QAEVVEDLLK-AGANVNLLDRHGNSVLHLAAAEGDDKILSLLLKHQKASSMIDLSNGEGL 650
Query: 64 SVLHLAVSGGRHKMTDFLINKTKLDINTRNSE-GMTALDI 102
S +H+ V+ LI +D+N + + G TAL +
Sbjct: 651 SAIHMVVTANSLSCLKLLI-AAGVDVNAQEQKSGRTALHL 689
>KBF1_MOUSE (P25799) Nuclear factor NF-kappa-B p105 subunit
(DNA-binding factor KBF1) (EBP-1) (NF-kappa-B1
p84/NF-kappa-B1 p98) [Contains: Nuclear factor
NF-kappa-B p50 subunit]
Length = 971
Score = 42.0 bits (97), Expect = 0.003
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 27 ETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGRHKMTDFLINKTK 86
+T HLAV D + L++V +LL DR+GNSVLHLA G ++ L+ K
Sbjct: 579 QTPLHLAVITKQEDVVEDLLRVGADLSLL---DRWGNSVLHLAAKEGHDRILSILLKSRK 635
Query: 87 LD--INTRNSEGMTALDI 102
I+ N EG+ A+ I
Sbjct: 636 AAPLIDHPNGEGLNAIHI 653
>NTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 precursor
(Notch 2)
Length = 2471
Score = 41.2 bits (95), Expect = 0.005
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Query: 2 NGKVSILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRY 61
+ +I+ D V A+ R E HLA RY DA L+ N QD
Sbjct: 1853 DSSANIITDLVYQGASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADAN---AQDNM 1909
Query: 62 GNSVLHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
G LH AV+ + LI D++ R ++G T L
Sbjct: 1910 GRCPLHAAVAADAQGVFQILIRNRVTDLDARMNDGTTPL 1948
>NTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2
precursor (Notch 2) (hN2)
Length = 2471
Score = 41.2 bits (95), Expect = 0.005
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Query: 2 NGKVSILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRY 61
+ +I+ D V A+ R E HLA RY DA L+ N QD
Sbjct: 1853 DSSANIITDLVYQGASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADAN---AQDNM 1909
Query: 62 GNSVLHLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
G LH AV+ + LI D++ R ++G T L
Sbjct: 1910 GRCPLHAAVAADAQGVFQILIRNRVTDLDARMNDGTTPL 1948
>NOTC_DROME (P07207) Neurogenic locus Notch protein precursor
Length = 2703
Score = 41.2 bits (95), Expect = 0.005
Identities = 26/94 (27%), Positives = 41/94 (42%), Gaps = 3/94 (3%)
Query: 7 ILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVL 66
++ D ++ A + + ET HLA R+ DA L+ N CQD G + L
Sbjct: 1932 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADAN---CQDNTGRTPL 1988
Query: 67 HLAVSGGRHKMTDFLINKTKLDINTRNSEGMTAL 100
H AV+ + L+ ++N R +G T L
Sbjct: 1989 HAAVAADAMGVFQILLRNRATNLNARMHDGTTPL 2022
>AFY1_HUMAN (Q9P2R3) Ankyrin repeat and FYVE domain protein 1
(Ankyrin repeats hooked to a zinc finger motif)
Length = 1169
Score = 40.4 bits (93), Expect = 0.009
Identities = 25/101 (24%), Positives = 47/101 (45%), Gaps = 6/101 (5%)
Query: 24 REEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGRHKMTDFLIN 83
R+ +T HLA +G + + L++ N QD G + +H+A+S + L++
Sbjct: 768 RDGQTPLHLAASWGLEETVQCLLEFGANVN---AQDAEGRTPIHVAISSQHGVIIQLLVS 824
Query: 84 KTKLDINTRNSEGMTALDILDQAMDSVESRQLQAIFIRAGG 124
+ +N R+ +G+T AM ++ +AI R G
Sbjct: 825 HPDIHLNVRDRQGLTPFAC---AMTFKNNKSAEAILKRESG 862
Score = 40.4 bits (93), Expect = 0.009
Identities = 28/91 (30%), Positives = 41/91 (44%), Gaps = 3/91 (3%)
Query: 15 SAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGR 74
+ A + LT+ +T HLA + + V + NG + D GN+ LHLAV GR
Sbjct: 928 AGAKVNELTKHRQTALHLAAQQDL--PTICSVLLENGVDFA-AVDENGNNALHLAVMHGR 984
Query: 75 HKMTDFLINKTKLDINTRNSEGMTALDILDQ 105
L+ + +D N G + L IL Q
Sbjct: 985 LNNIRVLLTECTVDAEAFNLRGQSPLHILGQ 1015
Score = 32.3 bits (72), Expect = 2.4
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 26 EETVFHLAVRYGCY----DALVFLVQVSN-----GTNLLHCQDRYGNSVLHLAVSGGRHK 76
+ET HL Y D + + Q++ G N + QD G + LH+++ G
Sbjct: 323 QETPLHLVALYSSKKHSADVMSEMAQIAEALLQAGANP-NMQDSKGRTPLHVSIMAGNEY 381
Query: 77 MTDFLINKTKLDINTRNSEGMTAL 100
+ L+ +LD+ ++ EG TAL
Sbjct: 382 VFSQLLQCKQLDLELKDHEGSTAL 405
>IKBB_RAT (Q9JIA3) NF-kappaB inhibitor beta (NF-kappa-BIB)
(I-kappa-B-beta) (IkappaBbeta) (IKB-beta) (IKB-B)
Length = 359
Score = 40.0 bits (92), Expect = 0.011
Identities = 25/67 (37%), Positives = 35/67 (51%)
Query: 3 GKVSILDDFVSGSAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYG 62
G V+ L +S + F Y+T + +T HLAV + L FL+ S GT L Q+ G
Sbjct: 35 GLVAELSPELSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYLDLQNDLG 94
Query: 63 NSVLHLA 69
+ LHLA
Sbjct: 95 QTALHLA 101
>AFY1_MOUSE (Q810B6) Ankyrin repeat and FYVE domain protein 1
(Ankyrin repeats hooked to a zinc finger motif)
Length = 1169
Score = 40.0 bits (92), Expect = 0.011
Identities = 25/101 (24%), Positives = 48/101 (46%), Gaps = 6/101 (5%)
Query: 24 REEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGRHKMTDFLIN 83
R+ +T HLA +G + + L++ N QD G + +H+A+S + LI+
Sbjct: 768 RDGQTPLHLAASWGLEETVQCLLEFGANVN---AQDAEGRTPVHVAISNQHSVIIQLLIS 824
Query: 84 KTKLDINTRNSEGMTALDILDQAMDSVESRQLQAIFIRAGG 124
++++ R+ +G+T AM ++ +AI R G
Sbjct: 825 HPNIELSVRDRQGLTPFAC---AMTYKNNKAAEAILKRESG 862
Score = 40.0 bits (92), Expect = 0.011
Identities = 28/91 (30%), Positives = 41/91 (44%), Gaps = 3/91 (3%)
Query: 15 SAASFHYLTREEETVFHLAVRYGCYDALVFLVQVSNGTNLLHCQDRYGNSVLHLAVSGGR 74
+ A + LT+ +T HLA + + V + NG + D GN+ LHLAV GR
Sbjct: 928 AGAKVNELTKHRQTALHLAAQQDL--PTICSVLLENGVDFA-AVDENGNNALHLAVMHGR 984
Query: 75 HKMTDFLINKTKLDINTRNSEGMTALDILDQ 105
L+ + +D N G + L IL Q
Sbjct: 985 LNNIRALLTECTVDAEAFNLRGQSPLHILGQ 1015
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,991,958
Number of Sequences: 164201
Number of extensions: 2008097
Number of successful extensions: 6481
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 6324
Number of HSP's gapped (non-prelim): 211
length of query: 425
length of database: 59,974,054
effective HSP length: 113
effective length of query: 312
effective length of database: 41,419,341
effective search space: 12922834392
effective search space used: 12922834392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC138130.16