BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138063.3 - phase: 0 /pseudo
(111 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-... 32 0.34
SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-2... 30 1.3
SNIP_HUMAN (Q9C0H9) p130Cas-associated protein (p140Cap) (SNAP-2... 30 1.3
KLC_LOLPE (P46825) Kinesin light chain (KLC) 29 1.7
H1C_CHITE (P40277) Histone H1C 29 2.2
PVDG_PLAKN (P50494) Duffy receptor, gamma form precursor (Erythr... 28 3.8
CTFX_HUMAN (Q96M20) Protein C20orf152 28 3.8
XPP2_HUMAN (O43895) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.1... 28 5.0
SPEN_DROME (Q8SX83) Split ends protein 28 5.0
USH_DROME (Q9VPQ6) Zinc-finger protein ush (U-shaped protein) 27 6.5
TER2_ECOLI (P04483) Tetracycline repressor protein class B from ... 27 6.5
SYT3_HUMAN (Q9BQG1) Synaptotagmin-3 (Synaptotagmin III) (SytIII) 27 6.5
HYSA_STRPN (Q54873) Hyaluronate lyase precursor (EC 4.2.2.1) (Hy... 27 6.5
ABL2_HUMAN (P42684) Tyrosine-protein kinase ABL2 (EC 2.7.1.112) ... 27 6.5
SRPA_SYNP7 (Q55025) Protein srpA precursor 27 8.5
SFR8_HUMAN (Q12872) Splicing factor, arginine/serine-rich 8 (Sup... 27 8.5
S24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-rela... 27 8.5
PQQC_METEX (Q49150) Bifunctional coenzyme PQQ synthesis protein ... 27 8.5
PBP7_HAEIN (P44664) Penicillin-binding protein 7 homolog precurs... 27 8.5
H12_HUMAN (P16403) Histone H1.2 (Histone H1d) 27 8.5
>SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap)
(SNAP-25-interacting protein) (SNIP)
Length = 1197
Score = 31.6 bits (70), Expect = 0.34
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 80 PTPTSEYNPPQLPIGQKAAKK 100
PTPT ++ PP+ P GQKAA +
Sbjct: 992 PTPTPDHKPPKAPHGQKAAPR 1012
>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap)
(SNAP-25-interacting protein) (SNIP)
Length = 1250
Score = 29.6 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 80 PTPTSEYNPPQLPIGQKAAKK 100
P PT ++ PP+ P GQKAA +
Sbjct: 1025 PAPTPDHKPPKAPHGQKAAPR 1045
>SNIP_HUMAN (Q9C0H9) p130Cas-associated protein (p140Cap)
(SNAP-25-interacting protein) (SNIP)
Length = 1055
Score = 29.6 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 80 PTPTSEYNPPQLPIGQKAAKK 100
P PT ++ PP+ P GQKAA +
Sbjct: 830 PAPTPDHKPPKAPHGQKAAPR 850
>KLC_LOLPE (P46825) Kinesin light chain (KLC)
Length = 571
Score = 29.3 bits (64), Expect = 1.7
Identities = 23/93 (24%), Positives = 39/93 (41%)
Query: 13 KSGASESDNISAAKDIYYQDVREKFTLENAWKLLRDEPKWLAGCVLEPSAKRTKNSASGA 72
K GA + D S K + TL+N L R + K+ A LE A R++ SA
Sbjct: 448 KDGAPQPDYGSWLKAVKVDSPTVTTTLKNLGALYRRQGKYEAAETLEECALRSRKSALEV 507
Query: 73 YLASSNPPTPTSEYNPPQLPIGQKAAKKKGKEK 105
+ S+++ Q P +K + + + +
Sbjct: 508 VRQTKISDVLGSDFSKGQSPKDRKRSNSRDRNR 540
>H1C_CHITE (P40277) Histone H1C
Length = 221
Score = 28.9 bits (63), Expect = 2.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 57 VLEPSAKRTKNSASGAYLASSNPPTPTSEYNPPQLPIGQKAAKKKGKE 104
+ +P AK TK A+ A P P + P P +KAA K K+
Sbjct: 158 IKKPVAKTTKKPAAAKPAAKKAAPKPKAAPKPKAAPKPKKAAAPKAKK 205
>PVDG_PLAKN (P50494) Duffy receptor, gamma form precursor
(Erythrocyte binding protein)
Length = 1070
Score = 28.1 bits (61), Expect = 3.8
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 10 ALKKSGASESDNISAAKDIYYQDVR--EKFTLENAWKLLRDEPKWLAGCVLEPSAKRT-- 65
++KK+ E++NI+ A DI Q++ + T EN + C+++ + K T
Sbjct: 454 SVKKAQKIETENIARAYDILKQELNGFNEVTFENEINKRDKLYNYFCVCIVQEARKNTQE 513
Query: 66 --KNSASG--AYLASSNP 79
KN SG + SSNP
Sbjct: 514 NVKNVGSGVESKAPSSNP 531
>CTFX_HUMAN (Q96M20) Protein C20orf152
Length = 576
Score = 28.1 bits (61), Expect = 3.8
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Query: 31 QDVREKFTLENAWKLLRDEPKWLAGCVLEPSAKRTKNSASGAYLASSNPPTPTSEYNPPQ 90
+D+ +KF +N+W + R K L ++EP + L + N P YNP
Sbjct: 482 EDMCQKFLQQNSWNIFR---KDLLQLLVEPCQSQ---------LFTPNRPKKREIYNPKS 529
Query: 91 LPIGQKAAKKKGKEKHVVF 109
+ + + K K ++ +F
Sbjct: 530 VVLDLCSINKTTKPRYPIF 548
>XPP2_HUMAN (O43895) Xaa-Pro aminopeptidase 2 precursor (EC
3.4.11.9) (X-Pro aminopeptidase 2) (Membrane-bound
aminopeptidase P) (Membrane-bound APP) (Membrane-bound
AmP) (mAmP) (Aminoacylproline aminopeptidase)
Length = 674
Score = 27.7 bits (60), Expect = 5.0
Identities = 18/44 (40%), Positives = 24/44 (53%), Gaps = 1/44 (2%)
Query: 29 YYQDVREKFTLENAWKLLRDEPKWLAGCVLEPSAKRTKNSASGA 72
YYQ +REK E + L +E +WL EP A R ++AS A
Sbjct: 617 YYQTIREKVGPELQRRQLLEEFEWLQQHT-EPLAARAPDTASWA 659
>SPEN_DROME (Q8SX83) Split ends protein
Length = 5560
Score = 27.7 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (61%)
Query: 59 EPSAKRTKNSASGAYLASSNPPTPTSEYN 87
+PS+ T NS+SG+ L + TP EY+
Sbjct: 1215 QPSSSSTTNSSSGSGLGGISSLTPADEYH 1243
>USH_DROME (Q9VPQ6) Zinc-finger protein ush (U-shaped protein)
Length = 1191
Score = 27.3 bits (59), Expect = 6.5
Identities = 16/46 (34%), Positives = 23/46 (49%), Gaps = 2/46 (4%)
Query: 37 FTLENAWKLLRDEPKWLAGCVLEPSAKRTKNSASGAYLASSNPPTP 82
FT++N ++ L G LEP +SA+ A A S+PP P
Sbjct: 484 FTVDNG--TIKPLATALVGATLEPERPSAPSSAAEATEAKSSPPEP 527
>TER2_ECOLI (P04483) Tetracycline repressor protein class B from
transposon Tn10
Length = 207
Score = 27.3 bits (59), Expect = 6.5
Identities = 21/76 (27%), Positives = 32/76 (41%), Gaps = 9/76 (11%)
Query: 34 REKFTLENAWKLLRDEPKWLAGCVLEPSAKRTKNSASGAYLASSNPPTPTSEYNPPQLPI 93
++ F+LENA L + GCVLE + +A TPT++ PP L
Sbjct: 122 QQGFSLENALYALSAVGHFTLGCVLEDQEHQ---------VAKEERETPTTDSMPPLLRQ 172
Query: 94 GQKAAKKKGKEKHVVF 109
+ +G E +F
Sbjct: 173 AIELFDHQGAEPAFLF 188
>SYT3_HUMAN (Q9BQG1) Synaptotagmin-3 (Synaptotagmin III) (SytIII)
Length = 590
Score = 27.3 bits (59), Expect = 6.5
Identities = 14/38 (36%), Positives = 23/38 (59%), Gaps = 4/38 (10%)
Query: 77 SNPPTPTSEYNPPQLPI----GQKAAKKKGKEKHVVFQ 110
++ P P+SE PP LP+ G++ AK G+ K ++Q
Sbjct: 239 TSQPDPSSEERPPALPLPLPGGEEKAKLIGQIKPELYQ 276
>HYSA_STRPN (Q54873) Hyaluronate lyase precursor (EC 4.2.2.1)
(Hyaluronidase) (HYase)
Length = 1066
Score = 27.3 bits (59), Expect = 6.5
Identities = 14/65 (21%), Positives = 28/65 (42%)
Query: 15 GASESDNISAAKDIYYQDVREKFTLENAWKLLRDEPKWLAGCVLEPSAKRTKNSASGAYL 74
G S+ D+ +A + + + + T +W +L+D+ +L + S + L
Sbjct: 759 GTSKLDDANATATMDFTNWNQTLTAHKSWFMLKDKIAFLGSNIQNTSTDTAATTIDQRKL 818
Query: 75 ASSNP 79
S NP
Sbjct: 819 ESGNP 823
>ABL2_HUMAN (P42684) Tyrosine-protein kinase ABL2 (EC 2.7.1.112)
(Tyrosine kinase ARG)
Length = 1182
Score = 27.3 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 60 PSAKRTKNSASGAYLASSNPPTPTSEYNPPQLPIGQKAAKKKGKEKH 106
P AK A+ L + + +E +PP + + AA KGKEK+
Sbjct: 848 PKAKLLPRGATALPLRTPSGDLAITEKDPPGVGVAGVAAAPKGKEKN 894
>SRPA_SYNP7 (Q55025) Protein srpA precursor
Length = 339
Score = 26.9 bits (58), Expect = 8.5
Identities = 11/19 (57%), Positives = 14/19 (72%)
Query: 63 KRTKNSASGAYLASSNPPT 81
K +N A A+LAS+NPPT
Sbjct: 170 KYPENKAQAAFLASNNPPT 188
>SFR8_HUMAN (Q12872) Splicing factor, arginine/serine-rich 8
(Suppressor of white apricot protein homolog)
Length = 951
Score = 26.9 bits (58), Expect = 8.5
Identities = 18/63 (28%), Positives = 28/63 (43%), Gaps = 6/63 (9%)
Query: 50 PKWLAGCVLEPSAKRTKNSASGAYLASSNPPTPTSEYNPPQLPIG------QKAAKKKGK 103
P+ AG + E ++S + L + P PT E PP P ++ K+K K
Sbjct: 699 PEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEKKK 758
Query: 104 EKH 106
+KH
Sbjct: 759 KKH 761
>S24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-related
protein D)
Length = 1032
Score = 26.9 bits (58), Expect = 8.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 77 SNPPTPTSEYNPPQLP 92
S PP P ++Y PP LP
Sbjct: 197 SGPPPPNAQYQPPPLP 212
>PQQC_METEX (Q49150) Bifunctional coenzyme PQQ synthesis protein C/D
(Pyrroloquinoline quinone biosynthesis protein C/D)
Length = 372
Score = 26.9 bits (58), Expect = 8.5
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 55 GCVLEPSAKRTKNSASGAYLASSNPPTPTSEYNPPQLPIGQKAAKKKGKEKHVV 108
G V E ++ +A+ + A++ PT S + P+LP G + + + KHV+
Sbjct: 256 GLVAETNSAEDSPAAAASPAATTAEPTAFSGSDVPRLPRGVRLRFDEVRNKHVL 309
>PBP7_HAEIN (P44664) Penicillin-binding protein 7 homolog precursor
(PBP-7) (D-alanyl-D-alanine-endopeptidase) (EC 3.4.99.-)
(DD-endopeptidase)
Length = 292
Score = 26.9 bits (58), Expect = 8.5
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 7 DVVALKKSGASESD--NISAAKDIYYQDVREKFTLENAWKLLRDE 49
D+V L K ++SD +S Y Q ++K ++N KL+RDE
Sbjct: 155 DLVKLAKYSLNKSDIKRLSNLSATYIQAGKQKLYIKNTNKLVRDE 199
>H12_HUMAN (P16403) Histone H1.2 (Histone H1d)
Length = 212
Score = 26.9 bits (58), Expect = 8.5
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 61 SAKRTKNSASGAYLASSNPPTPTSEYNPPQLPIGQKAAKKKGKEK 105
+AK+ K +A GA S TP P + +K AK K K
Sbjct: 133 AAKKPKKAAGGATPKKSAKKTPKKAKKPAAATVTKKVAKSPKKAK 177
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.310 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,040,687
Number of Sequences: 164201
Number of extensions: 536693
Number of successful extensions: 1470
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1453
Number of HSP's gapped (non-prelim): 26
length of query: 111
length of database: 59,974,054
effective HSP length: 87
effective length of query: 24
effective length of database: 45,688,567
effective search space: 1096525608
effective search space used: 1096525608
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC138063.3