
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138017.12 + phase: 1 /pseudo
(95 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PGL2_CHAOB (Q7M1E7) Polygalacturonase precursor (PG) (EC 3.2.1.1... 37 0.007
PGL2_JUNAS (Q9FY19) Polygalacturonase precursor (PG) (EC 3.2.1.1... 33 0.12
PGL2_CRYJA (P43212) Polygalacturonase precursor (EC 3.2.1.15) (P... 32 0.28
BIOB_HAEIN (P44987) Biotin synthase (EC 2.8.1.6) (Biotin synthet... 28 5.2
ATE_RALSO (Q8XYZ0) Putative arginyl-tRNA--protein transferase (E... 28 5.2
YM68_YEAST (Q04991) Hypothetical transporter YMR221C 27 6.8
SEB2_HUMAN (Q96T68) Probable histone-lysine N-methyltransferase,... 27 8.9
PASK_MOUSE (Q8CEE6) PAS domain containing serine/threonine-prote... 27 8.9
COR4_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein) 27 8.9
AGSR_HUMAN (O00253) Agouti-related protein precursor 27 8.9
>PGL2_CHAOB (Q7M1E7) Polygalacturonase precursor (PG) (EC 3.2.1.15)
(Pectinase) (Major pollen allergen Cha o 2)
Length = 514
Score = 37.4 bits (85), Expect = 0.007
Identities = 20/84 (23%), Positives = 34/84 (39%), Gaps = 23/84 (27%)
Query: 16 MEENGSMLAEK----LQIGSRPPKCERRCRSCVHCEAVQVPIVPSKVQIHRSHYDSAAYS 71
M+EN A+ + + S PP C+ +C+ C C+ + + P+K Q
Sbjct: 449 MDENKGACAKGDSTCISLSSSPPNCKNKCKGCQPCKPKLIIVHPNKPQ------------ 496
Query: 72 SRGDGLSNYKPISWKCKCGDYFFN 95
+Y P W C C + +N
Sbjct: 497 -------DYYPQKWVCSCHNKIYN 513
>PGL2_JUNAS (Q9FY19) Polygalacturonase precursor (PG) (EC 3.2.1.15)
(Pectinase) (Major pollen allergen Jun a 2)
Length = 507
Score = 33.1 bits (74), Expect = 0.12
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 21/76 (27%)
Query: 22 MLAEKL--QIGSRPPKCERRCRSCVHCEAVQVPIVPSKVQIHRSHYDSAAYSSRGDGLSN 79
++ EK+ + S PP C+ +C+ C C+ + + P++ + +
Sbjct: 450 LMDEKMGASLNSSPPNCKNKCKGCQPCKPKLIIVHPNQPE-------------------D 490
Query: 80 YKPISWKCKCGDYFFN 95
Y P W C C + +N
Sbjct: 491 YYPQRWVCSCHNKIYN 506
>PGL2_CRYJA (P43212) Polygalacturonase precursor (EC 3.2.1.15) (PG)
(Pectinase) (Major pollen allergen Cry j 2) (Cry j II)
Length = 514
Score = 32.0 bits (71), Expect = 0.28
Identities = 10/23 (43%), Positives = 15/23 (64%)
Query: 26 KLQIGSRPPKCERRCRSCVHCEA 48
++ +GSRPP C +C C C+A
Sbjct: 463 RILLGSRPPNCTNKCHGCSPCKA 485
>BIOB_HAEIN (P44987) Biotin synthase (EC 2.8.1.6) (Biotin
synthetase)
Length = 333
Score = 27.7 bits (60), Expect = 5.2
Identities = 20/52 (38%), Positives = 26/52 (49%), Gaps = 4/52 (7%)
Query: 22 MLAEKLQIGSRPPKCERRCRSCVHCEAV-QVP---IVPSKVQIHRSHYDSAA 69
MLAEKLQI S P S EA+ + P +V Q+HR H++ A
Sbjct: 1 MLAEKLQINSITPHPSVEYWSVCKVEALFETPFLELVYRATQVHRKHFNPRA 52
>ATE_RALSO (Q8XYZ0) Putative arginyl-tRNA--protein transferase (EC
2.3.2.8) (R-transferase) (Arginyltransferase)
Length = 257
Score = 27.7 bits (60), Expect = 5.2
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 34 PKCERRCRSCVHCEAVQVPIVPSKVQ 59
P C+ C +C C V P VPS+ Q
Sbjct: 64 PHCDD-CHACTPCRVVVAPFVPSRAQ 88
>YM68_YEAST (Q04991) Hypothetical transporter YMR221C
Length = 504
Score = 27.3 bits (59), Expect = 6.8
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 3 RPISNLNEVAKNGMEENGSMLAEKLQIGSRPPKCERRCRSCVHCEAVQVPIVPSK 57
+ ++++ ++A G++ENG ++ G P + ER+ + E +P P +
Sbjct: 212 KTVNHIAKIAVEGLDENGRLIEGDTGSGIIPDEQERQSLIAIEREEDSIPSRPQR 266
>SEB2_HUMAN (Q96T68) Probable histone-lysine N-methyltransferase, H3
lysine-9 specific (EC 2.1.1.43) (Histone H3-K9
methyltransferase) (H3-K9-HMTase) (SET domain bifurcated
2) (Chronic lymphocytic leukemia deletion region gene 8
protein)
Length = 719
Score = 26.9 bits (58), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (43%), Gaps = 6/61 (9%)
Query: 1 AGRPISNLNEVAKNGMEENGSMLAEKLQIGSRPPKCERRCRSCVHCEAVQVPIVPSKVQI 60
+GR +S N G++ENG I S+ K E C C +V ++P ++
Sbjct: 397 SGRLLSRANTEKSYGIDENGRDENTMKNIFSKKRKLEVACSDC------EVEVLPLGLET 450
Query: 61 H 61
H
Sbjct: 451 H 451
>PASK_MOUSE (Q8CEE6) PAS domain containing serine/threonine-protein
kinase (EC 2.7.1.37) (PAS-kinase) (PASKIN)
Length = 1383
Score = 26.9 bits (58), Expect = 8.9
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 12/58 (20%)
Query: 10 EVAKNGMEENGSMLAEKLQIGSRPPK------------CERRCRSCVHCEAVQVPIVP 55
EV + E+G + A L+IGSR P R R HC ++ P +P
Sbjct: 1324 EVCRTNQPESGLLSAASLEIGSRSPSEMAQREGLCGPPAPRETRGDQHCLHLKDPSLP 1381
>COR4_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)
Length = 262
Score = 26.9 bits (58), Expect = 8.9
Identities = 21/79 (26%), Positives = 34/79 (42%), Gaps = 12/79 (15%)
Query: 6 SNLNEVAKNGMEENGSM--------LAEKLQIGSRPPKCERRCRSCVHCEAVQVPIVPSK 57
S+ +E + +++NG + L EKLQ G P + H + P P+
Sbjct: 87 SSSDEEEEEVIDDNGEVIKRKKKKGLKEKLQ-GKLPGHKDTEGE---HVTGLPAPAAPAS 142
Query: 58 VQIHRSHYDSAAYSSRGDG 76
VQ H H+D+ + DG
Sbjct: 143 VQTHGGHHDTDVVVEKIDG 161
>AGSR_HUMAN (O00253) Agouti-related protein precursor
Length = 132
Score = 26.9 bits (58), Expect = 8.9
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 10 EVAKNGMEENGSMLAEKLQIGSRPPKCERRC-RSCVHCEAVQVP 52
E A+ + + LAE L + R P+ RRC R C QVP
Sbjct: 57 EQAEEDLLQEAQALAEVLDLQDREPRSSRRCVRLHESCLGQQVP 100
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.134 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,359,600
Number of Sequences: 164201
Number of extensions: 429624
Number of successful extensions: 919
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 912
Number of HSP's gapped (non-prelim): 11
length of query: 95
length of database: 59,974,054
effective HSP length: 71
effective length of query: 24
effective length of database: 48,315,783
effective search space: 1159578792
effective search space used: 1159578792
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC138017.12