BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC138015.15 + phase: 0 /pseudo
         (821 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YTX2_XENLA (P14381) Transposon TX1 hypothetical 149 kDa protein ...    45  6e-04
S126_MOUSE (Q924N4) Solute carrier family 12 member 6 (Electrone...    33  3.1
S126_HUMAN (Q9UHW9) Solute carrier family 12 member 6 (Electrone...    33  3.1
POL2_MOUSE (P11369) Retrovirus-related Pol polyprotein [Contains...    33  3.1
LIN1_NYCCO (P08548) LINE-1 reverse transcriptase homolog               33  3.1
Y94A_RHOBA (Q7ULI3) Hypothetical UPF0324 membrane protein RB9488       33  4.0

>YTX2_XENLA (P14381) Transposon TX1 hypothetical 149 kDa protein
           (ORF 2)
          Length = 1308

 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 420 VKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYYSVE*PFINYLMLEMGFPCKF 479
           V GR IFDN+ L  +L+    R G+S    + +D +KA+  V+  ++   +    F  +F
Sbjct: 562 VPGRTIFDNVFLIRDLLHFARRTGLS-LAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQF 620

Query: 480 VN*AMACLTTTSYTYNVNGDLTRPFAAKKGLRQG 513
           V        +      +N  LT P A  +G+RQG
Sbjct: 621 VGYLKTMYASAECLVKINWSLTAPLAFGRGVRQG 654


>S126_MOUSE (Q924N4) Solute carrier family 12 member 6
           (Electroneutral potassium-chloride cotransporter 3)
           (K-Cl cotransporter 3)
          Length = 1150

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 15/64 (23%), Positives = 34/64 (52%), Gaps = 5/64 (7%)

Query: 292 VLCYLSISKTCCAQS---SQPWRSKMRYSPWIL--LRLQVLMVTVFVSLNALGTLLVIVS 346
           ++CYL ++  C  Q+   +  WR + RY  W L  + + + +  +F+S      + ++++
Sbjct: 651 LMCYLFVNLACALQTLLRTPNWRPRFRYYHWALSFMGMSICLALMFISSWYYAIVAMVIA 710

Query: 347 LMLY 350
            M+Y
Sbjct: 711 GMIY 714


>S126_HUMAN (Q9UHW9) Solute carrier family 12 member 6
           (Electroneutral potassium-chloride cotransporter 3)
           (K-Cl cotransporter 3)
          Length = 1150

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 15/64 (23%), Positives = 34/64 (52%), Gaps = 5/64 (7%)

Query: 292 VLCYLSISKTCCAQS---SQPWRSKMRYSPWIL--LRLQVLMVTVFVSLNALGTLLVIVS 346
           ++CYL ++  C  Q+   +  WR + RY  W L  + + + +  +F+S      + ++++
Sbjct: 651 LMCYLFVNLACALQTLLRTPNWRPRFRYYHWALSFMGMSICLALMFISSWYYAIVAMVIA 710

Query: 347 LMLY 350
            M+Y
Sbjct: 711 GMIY 714


>POL2_MOUSE (P11369) Retrovirus-related Pol polyprotein [Contains:
           Reverse transcriptase (EC 2.7.7.49); Endonuclease]
          Length = 1300

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 21/95 (22%), Positives = 41/95 (43%)

Query: 419 FVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYYSVE*PFINYLMLEMGFPCK 478
           F+ G   + NI  S  ++   ++       ++ +D +KA+  ++ PF+  ++   G    
Sbjct: 592 FIPGMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGP 651

Query: 479 FVN*AMACLTTTSYTYNVNGDLTRPFAAKKGLRQG 513
           ++N   A  +       VNG+       K G RQG
Sbjct: 652 YLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQG 686


>LIN1_NYCCO (P08548) LINE-1 reverse transcriptase homolog
          Length = 1260

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 21/95 (22%), Positives = 45/95 (47%)

Query: 419 FVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYYSVE*PFINYLMLEMGFPCK 478
           F+ G   + NI  S  +++  ++       ++ ID +KA+ +++ PF+   + ++G    
Sbjct: 565 FIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGT 624

Query: 479 FVN*AMACLTTTSYTYNVNGDLTRPFAAKKGLRQG 513
           F+    A  +  +    +NG   + F  + G RQG
Sbjct: 625 FLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQG 659


>Y94A_RHOBA (Q7ULI3) Hypothetical UPF0324 membrane protein RB9488
          Length = 543

 Score = 32.7 bits (73), Expect = 4.0
 Identities = 25/73 (34%), Positives = 33/73 (44%), Gaps = 7/73 (9%)

Query: 85  FLKEYLITVLYVWICLVLLLQRILLSYLLMY*LTIIFFPSLIQEK*GQNLHTNLLTNIWF 144
           FL+  + T  Y+   LVLL   +L+S LL   L  +F   L+           L+T  WF
Sbjct: 242 FLRPAISTEFYIKTGLVLLGAEVLMSRLLALGLPGVFVAWLVTP-------VVLITTYWF 294

Query: 145 KLKALKKDLKELN 157
             K LK   K LN
Sbjct: 295 GQKVLKIQSKSLN 307


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.348    0.153    0.523 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,563,495
Number of Sequences: 164201
Number of extensions: 2950589
Number of successful extensions: 10769
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 10764
Number of HSP's gapped (non-prelim): 7
length of query: 821
length of database: 59,974,054
effective HSP length: 119
effective length of query: 702
effective length of database: 40,434,135
effective search space: 28384762770
effective search space used: 28384762770
T: 11
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.8 bits)
S2: 70 (31.6 bits)