
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137994.2 + phase: 0 /pseudo
(379 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YTH3_CAEEL (P54002) Putative glycosyl transferase C14A4.3 in chr... 31 4.5
>YTH3_CAEEL (P54002) Putative glycosyl transferase C14A4.3 in
chromosome II (EC 2.-.-.-)
Length = 603
Score = 31.2 bits (69), Expect = 4.5
Identities = 20/63 (31%), Positives = 31/63 (48%), Gaps = 1/63 (1%)
Query: 18 KSYVRVDNLQEKYNEIQREMKALHRKELFGINAYDLC-LVSNVVIPPKFKVPDFEKYKGN 76
K +++ D L E I EM L+++E+ D C V +V +P + PDF K + N
Sbjct: 496 KPFLKSDKLVEVTRHIPTEMNNLNQEEISRYVDLDSCDYVVDVDMPQSDREPDFRKMEDN 555
Query: 77 TFP 79
P
Sbjct: 556 WKP 558
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.340 0.147 0.501
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,571,207
Number of Sequences: 164201
Number of extensions: 1556115
Number of successful extensions: 4897
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4897
Number of HSP's gapped (non-prelim): 1
length of query: 379
length of database: 59,974,054
effective HSP length: 112
effective length of query: 267
effective length of database: 41,583,542
effective search space: 11102805714
effective search space used: 11102805714
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC137994.2