BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137986.10 - phase: 0 
         (393 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BGIB_HUMAN (Q06430) N-acetyllactosaminide beta-1,6-N-acetylgluco...    52  2e-06
G6NT_BOVIN (Q92180) Beta-1,3-galactosyl-O-glycosyl-glycoprotein ...    50  8e-06
G6NT_MOUSE (Q09324) Beta-1,3-galactosyl-O-glycosyl-glycoprotein ...    50  1e-05
BGIB_MOUSE (P97402) N-acetyllactosaminide beta-1,6-N-acetylgluco...    50  1e-05
G6NT_HUMAN (Q02742) Beta-1,3-galactosyl-O-glycosyl-glycoprotein ...    49  3e-05
RPC2_SINAL (Q9THV5) DNA-directed RNA polymerase beta'' chain (EC...    35  0.33
DYR_AEDAL (P28019) Dihydrofolate reductase (EC 1.5.1.3)                33  1.6
XTH8_ARATH (Q8L9A9) Probable xyloglucan endotransglucosylase/hyd...    31  6.2
AB12_HUMAN (Q86UK0) ATP-binding cassette, sub-family A, member 1...    31  6.2

>BGIB_HUMAN (Q06430) N-acetyllactosaminide
           beta-1,6-N-acetylglucosaminyl-transferase (EC 2.4.1.150)
           (N-acetylglucosaminyltransferase) (I-branching enzyme)
           (IGNT)
          Length = 400

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 67/285 (23%), Positives = 117/285 (40%), Gaps = 51/285 (17%)

Query: 70  RLLKVLYHPNNYYLIHMDYGAPDAEHKDVAEYVANDPVFSQVGNVWIVGKPNLVTYRGPT 129
           RL + +Y P N Y +H+D  A   E KD  E      + S   N ++  K   V Y G +
Sbjct: 110 RLFRAIYMPQNIYCVHVDEKA-TTEFKDAVE-----QLLSCFPNAFLASKMEPVVYGGIS 163

Query: 130 MLATTLHAMAMLLK-TCHWDWFINLSASDYPLVTQDGMVPRDINFIQHTSRLGWKFNKRG 188
            L   L+ +  L      W + IN    D+PL T   +V     +++     G+K  K  
Sbjct: 164 RLQADLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIV----QYLK-----GFK-GKNI 213

Query: 189 KPMIIDPGLYSLNKS----------DIWWIIKQRNL----PTSFKLYTGSAWTIVSRSFS 234
            P ++ P  +++ ++          ++ ++I+   L    P +  +Y GSA+  +SR F+
Sbjct: 214 TPGVLPPA-HAIGRTKYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFA 272

Query: 235 EYCIMGWENLPRTL-LLYYTNFVSSPEGYFQTVICN----SQEYKNTTANHDLHYITWDN 289
            + +    + PR + LL ++    SP+ +F   +           N +   +L  I W +
Sbjct: 273 NFVL----HDPRAVDLLQWSKDTFSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSD 328

Query: 290 PPKQHPRS----------LGLKDYRKMVLSSRPFARKFKRNNIVL 324
              +H              G  D + +V S   FA KF+ N   L
Sbjct: 329 MEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPL 373


>G6NT_BOVIN (Q92180) Beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase (EC 2.4.1.102)
           (Core 2 branching enzyme) (Core2-GlcNAc-transferase)
           (C2GNT) (Core 2 GNT)
          Length = 427

 Score = 50.4 bits (119), Expect = 8e-06
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 25/208 (12%)

Query: 68  LKRLLKVLYHPNNYYLIHMDYGAPDAEHKDVAEYVANDPVFSQVGNVWIVGKPNLVTYRG 127
           L RLL+ +Y P N+Y IH+D     +E   +A  V     FS   NV++  +   V Y  
Sbjct: 136 LDRLLRAIYMPQNFYCIHVD---AKSEKSFLAAAVGIASCFS---NVFVASQLESVVYAS 189

Query: 128 PTMLATTLHAMAMLLK-TCHWDWFINLSASDYPLVTQDGMVPRDINFIQ-----HTSRLG 181
            + +   L+ M  L +    W + INL   D+P+ T   +V R +  +       T ++ 
Sbjct: 190 WSRVQADLNCMQDLYQMNAGWKYLINLCGMDFPIKTNLEIV-RKLKLLMGENNLETEKMP 248

Query: 182 WKFNKRGKP--MIIDPGLYSLNKSDIWWIIKQRNLPTSFKLYTGSAWTIVSRSFSEYCIM 239
               +R K    +++  L ++    I       + P    L++GSA  +VSR + EY + 
Sbjct: 249 SHKKERWKKHYEVVNGKLTNMGTDKI-------HPPLETPLFSGSAHFVVSREYVEYVLQ 301

Query: 240 GWENLPRTLLLYYTNFVSSPEGYFQTVI 267
             +N+ +   + +     SP+ Y    I
Sbjct: 302 N-QNIQK--FMEWAKDTYSPDEYLWATI 326


>G6NT_MOUSE (Q09324) Beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase (EC 2.4.1.102)
           (Core 2 branching enzyme) (Core2-GlcNAc-transferase)
           (C2GNT)
          Length = 428

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 69/308 (22%), Positives = 124/308 (39%), Gaps = 56/308 (18%)

Query: 45  RTNITYPITFAYLISASKGDTLKLKRLLKVLYHPNNYYLIHMDYGAPDAEHKDVAEYVAN 104
           +  + +PI ++ ++         L RLL+ +Y P N+Y IH+D  A +      +   A 
Sbjct: 116 KEEVGFPIAYSIVVHHK---IEMLDRLLRAIYMPQNFYCIHVDRKAEE------SFLAAV 166

Query: 105 DPVFSQVGNVWIVGKPNLVTYRGPTMLATTLHAMAMLLK-TCHWDWFINLSASDYPLVTQ 163
             + S   NV++  +   V Y   T +   L+ M  L +   +W + INL   D+P+ T 
Sbjct: 167 QGIASCFDNVFVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTN 226

Query: 164 DGMVPR------DINFIQHTSRLGWKFNKRGKP--MIIDPGLYSLNKSDIWWIIKQRNLP 215
             +V +      + N    T ++     +R K    ++D  L +         I +   P
Sbjct: 227 LEIVRKLKCSTGENNL--ETEKMPPNKEERWKKRYAVVDGKLTNTG-------IVKAPPP 277

Query: 216 TSFKLYTGSAWTIVSRSFSEYCIMGWENLPRTLLLYYTNFVSSPEGYFQTVI-------- 267
               L++GSA+ +V+R +  Y ++  EN+ +  L+ +     SP+ +    I        
Sbjct: 278 LKTPLFSGSAYFVVTREYVGY-VLENENIQK--LMEWAQDTYSPDEFLWATIQRIPEVPG 334

Query: 268 --CNSQEYKNTTANHDLHYITWD-----------NPPKQ--HPRSL---GLKDYRKMVLS 309
              +S +Y  +  N    ++ W             PP    H RS+   G  D   M+  
Sbjct: 335 SFPSSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQ 394

Query: 310 SRPFARKF 317
              FA KF
Sbjct: 395 HHLFANKF 402


>BGIB_MOUSE (P97402) N-acetyllactosaminide
           beta-1,6-N-acetylglucosaminyl-transferase (EC 2.4.1.150)
           (N-acetylglucosaminyltransferase) (I-branching enzyme)
           (IGNT) (Large I antigen-forming
           beta-1,6-N-acetylglucosaminyltransferase)
          Length = 400

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 65/285 (22%), Positives = 116/285 (39%), Gaps = 51/285 (17%)

Query: 70  RLLKVLYHPNNYYLIHMDYGAPDAEHKDVAEYVANDPVFSQVGNVWIVGKPNLVTYRGPT 129
           RL + ++ P N Y +H+D  A  AE K   E +      S   NV++  K   V Y G +
Sbjct: 110 RLFRAIFMPQNIYCVHVDEKAT-AEFKGAVEQLV-----SCFPNVFLASKMEPVVYGGIS 163

Query: 130 MLATTLHAMAMLLKT-CHWDWFINLSASDYPLVTQDGMVPRDINFIQHTSRLGWKFNKRG 188
            L   L+ +  L  +   W + IN    D+PL T   +V       Q+   L     K  
Sbjct: 164 RLQADLNCIKDLSTSEVPWKYAINTCGQDFPLKTNKEIV-------QYLKGLK---GKNL 213

Query: 189 KPMIIDPGLYSLNKS----------DIWWIIKQRNL----PTSFKLYTGSAWTIVSRSFS 234
            P ++ P  +++ ++          ++ ++I+   L    P +  +Y GSA+  +SR F+
Sbjct: 214 TPGVLPPA-HAIGRTRYVHREHLSKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFA 272

Query: 235 EYCIMGWENLPRTL-LLYYTNFVSSPEGYFQTVICNSQEYKNTTAN----HDLHYITWDN 289
            + +      PR + LL+++    SP+ +F   +        +  N     +L  + W +
Sbjct: 273 NFVLRD----PRAVDLLHWSKDTFSPDEHFWVTLNRIPGVPGSPPNASWTGNLRAVKWMD 328

Query: 290 PPKQHPRS----------LGLKDYRKMVLSSRPFARKFKRNNIVL 324
              +H              G  D + ++ S   FA KF+ N   L
Sbjct: 329 MEAKHGGCQGHYVHGICIYGNGDLQWLINSQSLFANKFELNTYPL 373


>G6NT_HUMAN (Q02742) Beta-1,3-galactosyl-O-glycosyl-glycoprotein
           beta-1,6-N-acetylglucosaminyltransferase (EC 2.4.1.102)
           (Core 2 branching enzyme) (Core2-GlcNAc-transferase)
           (C2GNT) (Core 2 GNT)
          Length = 428

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 48/206 (23%), Positives = 85/206 (40%), Gaps = 21/206 (10%)

Query: 68  LKRLLKVLYHPNNYYLIHMDYGAPDAEHKDVAEYVANDPVFSQVGNVWIVGKPNLVTYRG 127
           L RLL+ +Y P N+Y +H+D  + D      +   A   + S   NV++  +   V Y  
Sbjct: 136 LDRLLRAIYMPQNFYCVHVDTKSED------SYLAAVMGIASCFSNVFVASRLESVVYAS 189

Query: 128 PTMLATTLHAMA-MLLKTCHWDWFINLSASDYPLVTQDGMVPRDINFIQ-----HTSRLG 181
            + +   L+ M  +   + +W + INL   D+P+ T   +V R +  +       T R+ 
Sbjct: 190 WSRVQADLNCMKDLYAMSANWKYLINLCGMDFPIKTNLEIV-RKLKLLMGENNLETERMP 248

Query: 182 WKFNKRGKPMIIDPGLYSLNKSDIWWIIKQRNLPTSFKLYTGSAWTIVSRSFSEYCIMGW 241
               +R K           N   +  +      P    L++GSA+ +VSR +  Y +   
Sbjct: 249 SHKEERWKKRYEVVNGKLTNTGTVKML-----PPLETPLFSGSAYFVVSREYVGYVL--- 300

Query: 242 ENLPRTLLLYYTNFVSSPEGYFQTVI 267
           +N     L+ +     SP+ Y    I
Sbjct: 301 QNEKIQKLMEWAQDTYSPDEYLWATI 326


>RPC2_SINAL (Q9THV5) DNA-directed RNA polymerase beta'' chain (EC
            2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta''
            subunit) (RNA polymerase beta'' subunit)
          Length = 1384

 Score = 35.0 bits (79), Expect = 0.33
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 18/131 (13%)

Query: 15   ILFFFLFIPTRLTLQISTLKPSAMDYFNVLRTNITYPITFAYLISASKGDTLKLKRLLKV 74
            IL F  F  T+L  QIS +K     Y ++  +N+ +P+  +YLI    G    L     +
Sbjct: 989  ILIFIHFAFTKLINQISCIK-----YLHLQTSNVFFPVIHSYLID-ENGRIFNLDPYSNL 1042

Query: 75   LYHP--NNYYLIHMDYGAPDAEHKDVA----------EYVANDPVFSQVGNVWIVGKPNL 122
            + +P   N+Y +H +Y     E                 +A    + + G V IV + ++
Sbjct: 1043 VLNPFKLNWYFLHQNYNNNYCEETSTIISLGQFFCENVCIAKKEPYLKSGQVLIVQRDSV 1102

Query: 123  VTYRGPTMLAT 133
            V       LAT
Sbjct: 1103 VIRSAKPYLAT 1113


>DYR_AEDAL (P28019) Dihydrofolate reductase (EC 1.5.1.3)
          Length = 186

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 106 PVFSQVGNVWIVGKPNLVTYRGPTMLATTLHAMAM--LLKTCHWDWFINLSASDYPLVTQ 163
           P+ +++ NVWIVG      Y+   M +   H + +  + +T   D F     SD+ LV  
Sbjct: 104 PLVNEIENVWIVG--GNAVYK-EAMQSDRCHRIYLTEIKETFECDAFFPEITSDFQLVKN 160

Query: 164 DGMVPRDI---NFIQHTSRLGWKFNK 186
           D  VP DI   N IQ+  R+  K  K
Sbjct: 161 DDDVPEDIQEENGIQYQYRIYEKVPK 186


>XTH8_ARATH (Q8L9A9) Probable xyloglucan
           endotransglucosylase/hydrolase protein 8 precursor (EC
           2.4.1.207) (At-XTH8) (XTH-8)
          Length = 292

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 24/97 (24%), Positives = 41/97 (41%), Gaps = 12/97 (12%)

Query: 264 QTVICNSQEYKNTTANHDLHYITWDNPPKQ-HPRSLGLKDYRKMVLSSRPFARKFKRNNI 322
           Q  I  +  YKN T N ++ +  W +P K  H  S+   +++ +    R   R +K +  
Sbjct: 114 QPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNS-- 171

Query: 323 VLDKI-DRDLLKRYKGGFSFGG------WCSQGGRNK 352
             DK+ + D     K  + F        W ++GG  K
Sbjct: 172 --DKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEK 206


>AB12_HUMAN (Q86UK0) ATP-binding cassette, sub-family A, member 12
           (ATP-binding cassette transporter 12) (ATP-binding
           cassette 12)
          Length = 2595

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 20/75 (26%), Positives = 34/75 (44%), Gaps = 5/75 (6%)

Query: 243 NLPRTLLLYYTNFVSSPEGYFQTVICNSQEYKNTTANHDLHYITWDNPPKQHPRSLGLKD 302
           ++P T  +Y +N +++P+G F T+         TT      Y+T   P  Q P+    KD
Sbjct: 702 SVPLTQAMYRSNRMNTPQGSFSTISQALCSQGITT-----EYLTAMLPSSQRPKGNHTKD 756

Query: 303 YRKMVLSSRPFARKF 317
           +    L+    A K+
Sbjct: 757 FLTYKLTKEQIASKY 771


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.325    0.140    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,948,244
Number of Sequences: 164201
Number of extensions: 2168095
Number of successful extensions: 5474
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 5461
Number of HSP's gapped (non-prelim): 12
length of query: 393
length of database: 59,974,054
effective HSP length: 112
effective length of query: 281
effective length of database: 41,583,542
effective search space: 11684975302
effective search space used: 11684975302
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)