BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137829.8 - phase: 0
(123 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GALY_KLULA (P32257) Transcription regulatory protein GAL11 39 0.002
SECA_BUCAP (Q8K9U3) Preprotein translocase secA subunit 32 0.25
AVRV_XANCV (Q08678) Avirulence protein avrRxv 32 0.25
DIA2_MOUSE (O70566) Diaphanous protein homolog 2 (Diaphanous-rel... 31 0.43
GRPE_PROMP (Q7V3Q4) GrpE protein (HSP-70 cofactor) 30 0.73
SYV_SYNY3 (Q55522) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 30 0.96
FPG_BACSU (O34403) Formamidopyrimidine-DNA glycosylase (EC 3.2.2... 29 1.6
EFG1_CANAL (P43064) Enhanced filamentous growth protein 29 1.6
SMF1_HUMAN (O14497) SWI/SNF-related, matrix-associated, actin-de... 28 3.6
PIWI_DROME (Q9VKM1) Piwi protein 28 3.6
M3K5_MOUSE (O35099) Mitogen-activated protein kinase kinase kina... 28 3.6
SLBP_HUMAN (Q14493) Histone RNA hairpin-binding protein (Histone... 28 4.7
ESR1_ANOCA (Q9YHT3) Estrogen receptor (ER) (Estradiol receptor) ... 28 4.7
ADP1_MYCPN (P11311) Adhesin P1 precursor (Cytadhesin P1) (Attach... 28 4.7
TUAH_BACSU (O32267) Putative teichuronic acid biosynthesis glyco... 27 6.2
K6PF_METJA (Q58999) ADP-specific phosphofructokinase (EC 2.7.1.1... 27 6.2
GRIA_BACCE (O85467) Spore germination protein gerIA 27 6.2
YE09_MYCPN (P75375) Very hypothetical adhesin P1-like protein MP... 27 8.1
Y504_BORBU (O51457) Hypothetical UPF0144 protein BB0504 27 8.1
TAFC_MOUSE (Q8VE65) Transcription initiation factor TFIID subuni... 27 8.1
>GALY_KLULA (P32257) Transcription regulatory protein GAL11
Length = 1034
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 41/81 (49%), Gaps = 4/81 (4%)
Query: 20 DWRGQLQPESRQRIVNKIMDTLKRHLPVSGQE----GLHELRKIAQKFEDKIYTAATSQS 75
DWR + + R + V ++ L ++G E L +L+K A++FE +Y + S+
Sbjct: 3 DWRSTISTQERSQFVTELAQILADMSRINGGEKANFNLEKLKKSAEQFESSLYASCNSKD 62
Query: 76 DYLRKISLKMLTMETKSQGTI 96
YL + ++ M++ + +I
Sbjct: 63 LYLDAMRKRIAAMDSAKRKSI 83
>SECA_BUCAP (Q8K9U3) Preprotein translocase secA subunit
Length = 874
Score = 32.0 bits (71), Expect = 0.25
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 15 NMDTSDWRGQLQPESRQRIVNKIMDTLKR-HLPVSGQEGLHELRKIAQ----KFEDKIYT 69
N+ DW + ++ I+ KI+D K+ +L Q G H +R I + K D ++
Sbjct: 715 NISIKDWLKKDHDIKKENIIKKIIDIAKKNYLNKEIQIGFHNIRMIEKSIMLKTLDSLWK 774
Query: 70 AATSQSDYLRK 80
S DYLR+
Sbjct: 775 EHLSAMDYLRQ 785
>AVRV_XANCV (Q08678) Avirulence protein avrRxv
Length = 373
Score = 32.0 bits (71), Expect = 0.25
Identities = 17/53 (32%), Positives = 26/53 (48%)
Query: 7 RPNQGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKI 59
RP + AE D + RG L P S N +D L+R+ P+S L ++ +
Sbjct: 75 RPRKKAEALSDAVESRGHLAPPSLVSYANATLDQLRRNEPISESLRLMDIENL 127
>DIA2_MOUSE (O70566) Diaphanous protein homolog 2
(Diaphanous-related formin 2) (DRF2) (mDia3)
Length = 1098
Score = 31.2 bits (69), Expect = 0.43
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 50 QEGLHELRKIAQKFEDKIYTAATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQVGPSN 109
+E + + ++KF+++ +TA L+K K+ +ET+ Q +P GP
Sbjct: 490 EENEQKAMEFSKKFDEE-FTARQEAQAELQKRDEKIKELETEIQQLRGQGVPSAIPGPPP 548
Query: 110 QPPYPG 115
PP PG
Sbjct: 549 PPPLPG 554
>GRPE_PROMP (Q7V3Q4) GrpE protein (HSP-70 cofactor)
Length = 239
Score = 30.4 bits (67), Expect = 0.73
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 22 RGQLQPESR--QRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTA 70
R QL+PES Q + K+ + V Q+G+ +R +AQ+F+ K++ A
Sbjct: 121 RQQLKPESEEAQTLHRSYQGLYKQLVEVLKQQGVSPMRVVAQQFDPKLHEA 171
>SYV_SYNY3 (Q55522) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA
ligase) (ValRS)
Length = 910
Score = 30.0 bits (66), Expect = 0.96
Identities = 18/44 (40%), Positives = 25/44 (55%), Gaps = 1/44 (2%)
Query: 24 QLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKI 67
QL PE Q I ++DT++ +P+SG L LR QK DK+
Sbjct: 818 QLPPEQTQAIAG-VVDTIQVLIPLSGLVDLDILRNKIQKTLDKV 860
>FPG_BACSU (O34403) Formamidopyrimidine-DNA glycosylase (EC
3.2.2.23) (FAPY-DNA glycosylase)
Length = 276
Score = 29.3 bits (64), Expect = 1.6
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 44 HLPVSGQEGLHELRKIAQKFEDKIYTAATSQSDYLRKISLKMLTMETKSQGTIANNIPPN 103
HL + G+ GLH+ + K I+T R + K TM G A +P +
Sbjct: 74 HLRMEGKYGLHQAEEPDDKHVHVIFTMTDGTQLRYRDVR-KFGTMHLFKPGEEAGELPLS 132
Query: 104 QVGP 107
Q+GP
Sbjct: 133 QLGP 136
>EFG1_CANAL (P43064) Enhanced filamentous growth protein
Length = 552
Score = 29.3 bits (64), Expect = 1.6
Identities = 20/59 (33%), Positives = 25/59 (41%), Gaps = 11/59 (18%)
Query: 68 YTAATSQSDYLRKISLKMLTMETKSQGTIANN----------IPPNQV-GPSNQPPYPG 115
Y AATSQ +Y ++ L+ +N IP N GPS QPP PG
Sbjct: 104 YPAATSQGNYYQQTIPNQLSQPQPQHYNGSNRNYTSAPSGAPIPSNSTSGPSQQPPLPG 162
>SMF1_HUMAN (O14497) SWI/SNF-related, matrix-associated,
actin-dependent regulator of chromatin subfamily F
member 1 (SWI-SNF complex protein p270) (B120)
Length = 1902
Score = 28.1 bits (61), Expect = 3.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 4 NNWRPNQGAEPNMDTSDWRGQLQPE 28
N+ PN G +P+M+TSD G++ E
Sbjct: 820 NSMTPNPGYQPSMNTSDMMGRMSYE 844
>PIWI_DROME (Q9VKM1) Piwi protein
Length = 843
Score = 28.1 bits (61), Expect = 3.6
Identities = 19/71 (26%), Positives = 32/71 (44%), Gaps = 7/71 (9%)
Query: 9 NQGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIY 68
+ G P + +DW+ + QR++ D L R ++ Q HELR + D +Y
Sbjct: 446 HNGKVPAGENADWQRHFRD---QRMLTTPSDGLDRWAVIAPQRNSHELRTLL----DSLY 498
Query: 69 TAATSQSDYLR 79
AA+ +R
Sbjct: 499 RAASGMGLRIR 509
>M3K5_MOUSE (O35099) Mitogen-activated protein kinase kinase kinase 5
(EC 2.7.1.37) (MAPK/ERK kinase kinase 5) (MEK kinase 5)
(MEKK 5) (Apoptosis signal-regulating kinase 1) (ASK-1)
Length = 1379
Score = 28.1 bits (61), Expect = 3.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 61 QKFEDKIYTAATSQSDYLRKISL--KMLTMETKSQGTIANNIPPNQVGPSNQPPYPGLHL 118
+K + K+ +T ++YLR ISL +L +T S + P ++ + P P L L
Sbjct: 952 KKTQPKLSALSTGSNEYLRSISLPVPVLVEDTSSSSEYGSVSPDTELKATPSPSKPELSL 1011
>SLBP_HUMAN (Q14493) Histone RNA hairpin-binding protein (Histone
stem-loop binding protein)
Length = 270
Score = 27.7 bits (60), Expect = 4.7
Identities = 29/114 (25%), Positives = 48/114 (41%), Gaps = 14/114 (12%)
Query: 10 QGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVS--GQEGLHELRKIAQKFEDKI 67
+G +P SDW ++ + + VNK M KR L ++ G+E RK + D
Sbjct: 64 EGPKPRSRCSDWASAVEEDEMRTRVNKEMARYKRKLLINDFGRE-----RKSSSGSSDSK 118
Query: 68 YTAATSQSDYLRKISLKMLTMETKSQG--TIA-----NNIPPNQVGPSNQPPYP 114
+ +T +D+ S+ M + + G TIA +P + P P P
Sbjct: 119 ESMSTVPADFETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTP 172
>ESR1_ANOCA (Q9YHT3) Estrogen receptor (ER) (Estradiol receptor)
(ER-alpha) (Fragment)
Length = 349
Score = 27.7 bits (60), Expect = 4.7
Identities = 26/101 (25%), Positives = 42/101 (40%), Gaps = 16/101 (15%)
Query: 32 RIVNKIMDTLKRHLPVSGQEGLHELRKIAQ-------------KFEDKIYTAATSQSDYL 78
R+++KI DTL + SG + R++AQ K + +Y+ L
Sbjct: 231 RVLDKITDTLMHLMAKSGLSLQQQHRRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPL 290
Query: 79 RKISLKMLTMETKSQGTIANNIPPNQVGPSNQ--PPYPGLH 117
+ L+ML + A PP++ P NQ P P +H
Sbjct: 291 YDLLLEMLDAH-RLHAPAAKGSPPSEDDPLNQLAVPSPSMH 330
>ADP1_MYCPN (P11311) Adhesin P1 precursor (Cytadhesin P1) (Attachment
protein)
Length = 1627
Score = 27.7 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 69 TAATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQV 105
T +T+ S YL + K +T K + N + PNQV
Sbjct: 1231 TQSTNSSPYLHLVKPKKVTQSDKLDDDLKNLLDPNQV 1267
>TUAH_BACSU (O32267) Putative teichuronic acid biosynthesis glycosyl
transferase tuaH (EC 2.4.1.-)
Length = 397
Score = 27.3 bits (59), Expect = 6.2
Identities = 22/72 (30%), Positives = 31/72 (42%), Gaps = 5/72 (6%)
Query: 46 PVSGQEGLHE--LRKIAQKFEDKIYTAA---TSQSDYLRKISLKMLTMETKSQGTIANNI 100
P+SG+ L RK+ + E +I A T SDYL K K LT + T+ N +
Sbjct: 140 PISGRSNLLSEFRRKVIKSAELRIIQRADSITCSSDYLHKEVDKKLTAGREKVHTVENGV 199
Query: 101 PPNQVGPSNQPP 112
+ Q P
Sbjct: 200 EYELFSANKQAP 211
>K6PF_METJA (Q58999) ADP-specific phosphofructokinase (EC 2.7.1.146)
(ADP-dependent phosphofructokinase) (ADP-Pfk)
Length = 462
Score = 27.3 bits (59), Expect = 6.2
Identities = 18/59 (30%), Positives = 28/59 (46%)
Query: 36 KIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAATSQSDYLRKISLKMLTMETKSQG 94
+ +D L L + + L++IA+KF D Y A S S Y+ K + +T S G
Sbjct: 389 RAIDDLHEGLKIPHNKYGDLLKEIAEKFNDNNYKIALSPSRYVEKPKSTVGLGDTISSG 447
>GRIA_BACCE (O85467) Spore germination protein gerIA
Length = 663
Score = 27.3 bits (59), Expect = 6.2
Identities = 15/46 (32%), Positives = 26/46 (55%), Gaps = 1/46 (2%)
Query: 14 PNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKI 59
P++D + L P +R N ++ LK H+P+SG ++L+KI
Sbjct: 218 PSLDGEKLQKYLMPTLLER-PNASLEELKEHIPMSGITITNDLQKI 262
>YE09_MYCPN (P75375) Very hypothetical adhesin P1-like protein
MPN409 (F11_orf533L)
Length = 533
Score = 26.9 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 69 TAATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQV 105
T +T+ S YL I K +T K + N + PN+V
Sbjct: 431 TQSTNSSPYLHLIQPKKVTQSDKLDDDLKNLLDPNEV 467
>Y504_BORBU (O51457) Hypothetical UPF0144 protein BB0504
Length = 510
Score = 26.9 bits (58), Expect = 8.1
Identities = 15/54 (27%), Positives = 27/54 (49%)
Query: 24 QLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAATSQSDY 77
+++PES + IV +I D + P + +E L+ ++ ED Y+ Q Y
Sbjct: 399 EVKPESLEAIVVQIADAISASRPGARRESLNNYINRLKRLEDIAYSFEGVQKCY 452
>TAFC_MOUSE (Q8VE65) Transcription initiation factor TFIID subunit
12 (Transcription initiation factor TFIID 20 kDa
subunits) (TAFII-20) (TAFII20)
Length = 161
Score = 26.9 bits (58), Expect = 8.1
Identities = 19/66 (28%), Positives = 35/66 (52%), Gaps = 3/66 (4%)
Query: 23 GQLQPESRQRIVNKIMDTLKRHLPVSGQ--EGLHE-LRKIAQKFEDKIYTAATSQSDYLR 79
G+L PE+ Q + K + L R + + Q E + E L +IA F + + TAA + + +
Sbjct: 48 GRLSPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRK 107
Query: 80 KISLKM 85
+L++
Sbjct: 108 SSTLEV 113
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.130 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,865,597
Number of Sequences: 164201
Number of extensions: 521676
Number of successful extensions: 1303
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1294
Number of HSP's gapped (non-prelim): 24
length of query: 123
length of database: 59,974,054
effective HSP length: 99
effective length of query: 24
effective length of database: 43,718,155
effective search space: 1049235720
effective search space used: 1049235720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC137829.8