BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137825.9 - phase: 0 
         (319 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

IM30_PEA (Q03943) Membrane-associated 30 kDa protein, chloroplas...   530  e-150
IM30_ORYSA (Q8S0J7) Probable membrane-associated 30 kDa protein,...   413  e-115
IM30_ARATH (O80796) Probable membrane-associated 30 kDa protein,...   411  e-114
Y617_SYNY3 (Q55707) Hypothetical protein sll0617                      211  3e-54
PSPA_DEIRA (Q9RUB7) Phage shock protein A homolog                     135  1e-31
PSPA_ECOLI (P23853) Phage shock protein A                             116  8e-26
PSPA_BACSU (P54617) Phage shock protein A homolog                     108  2e-23
YVQH_BACSU (O32201) Hypothetical protein yvqH                          87  6e-17
MYSN_ACACA (P05659) Myosin II heavy chain, non muscle                  50  7e-06
RA50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase        50  1e-05
M21_STRPY (P50468) M protein, serotype 2.1 precursor                   48  4e-05
35KD_MYCTU (P31511) 35 kDa protein                                     47  5e-05
RRB1_MOUSE (Q99PL5) Ribosome-binding protein 1 (Ribosome recepto...    47  6e-05
TRIP_HUMAN (Q9BWF2) TRAF-interacting protein                           45  2e-04
SLA2_YEAST (P33338) SLA2 protein (Transmembrane protein MOP2)          44  4e-04
REST_HUMAN (P30622) Restin (Cytoplasmic linker protein-170 alpha...    43  0.001
MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isof...    43  0.001
SMC2_CHICK (Q90988) Structural maintenance of chromosome 2 (Chro...    43  0.001
MYSS_CYPCA (Q90339) Myosin heavy chain, fast skeletal muscle           43  0.001
MYH4_RABIT (Q28641) Myosin heavy chain, skeletal muscle, juvenile      43  0.001

>IM30_PEA (Q03943) Membrane-associated 30 kDa protein, chloroplast
           precursor (M30)
          Length = 323

 Score =  530 bits (1366), Expect = e-150
 Identities = 283/324 (87%), Positives = 300/324 (92%), Gaps = 8/324 (2%)

Query: 1   MATKLQIFTQLPSAPLQSSSSSSSLRKPLATSFFGTRPANTVKFRGMRIAKPVRGGGAIG 60
           M TK QIF+ LPSAPLQ SSS   L+KPLAT+ FGTRP +T+KFR MRIAKPVRGGGAIG
Sbjct: 1   MTTKFQIFSGLPSAPLQPSSSL--LKKPLATTLFGTRPVDTLKFRVMRIAKPVRGGGAIG 58

Query: 61  AGMNLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRME 120
             MNLF+RF RVVKSYANA+VS+FEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKR+E
Sbjct: 59  VRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLE 118

Query: 121 NKYKAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSL 180
           NKYKAA QASEEWYRKAQLALQKGEEDLAREALKRRKSFADNAS+LKAQLDQQK VVD+L
Sbjct: 119 NKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKSVVDNL 178

Query: 181 VSNTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTM 240
           VSNTRLLESKIQEARSKKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKVMTM
Sbjct: 179 VSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMTM 238

Query: 241 ESQAEALGQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRS------ST 294
           ESQAEALGQLT+DDLEGKFAMLE+SSVDDDLANLKKEL+GSSKKGELPPGRS      ST
Sbjct: 239 ESQAEALGQLTTDDLEGKFAMLETSSVDDDLANLKKELAGSSKKGELPPGRSSTTSTTST 298

Query: 295 RTGTPFRDADIETELEQLRQRSKE 318
           +TG PFRDADIE ELEQLR+RSKE
Sbjct: 299 KTGNPFRDADIEIELEQLRKRSKE 322


>IM30_ORYSA (Q8S0J7) Probable membrane-associated 30 kDa protein,
           chloroplast precursor
          Length = 317

 Score =  413 bits (1062), Expect = e-115
 Identities = 226/315 (71%), Positives = 262/315 (82%), Gaps = 9/315 (2%)

Query: 9   TQLPSAPLQSSSSSSSLRKPLATSFFGTRPANTVKFRGMRIAKP-VRGGGAIGAGMNLFE 67
           T L  AP    +S+S  R  L TSF       +V  R +++ +  V      G   NL +
Sbjct: 8   TSLRLAP-PPPASASFRRTALRTSFLN----GSVSLRLIQVRQSNVNRFKCNGIRSNLLD 62

Query: 68  RFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAAT 127
           RF+RVVKSYANA++SSFEDPEKIL+QAVLEMNDDLTKMRQATAQVLASQKR+ENKYKAA 
Sbjct: 63  RFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAE 122

Query: 128 QASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLL 187
           QAS++WYR+AQLALQKG+EDLAREALKRRKS+ADNAS+LKAQLDQQKGVV++LVSNTR+L
Sbjct: 123 QASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSNTRVL 182

Query: 188 ESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEAL 247
           ESKI EA+ KKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVM MESQAEAL
Sbjct: 183 ESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAMESQAEAL 242

Query: 248 GQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGR---SSTRTGTPFRDAD 304
           GQL +DDLEGKFA+LE+SSVDDDLA +KKE+SGSS KGELPPGR   S++    PFRD +
Sbjct: 243 GQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAARPFRDIE 302

Query: 305 IETELEQLRQRSKEF 319
           IE EL +LR+++ E+
Sbjct: 303 IENELNELRKKANEY 317


>IM30_ARATH (O80796) Probable membrane-associated 30 kDa protein,
           chloroplast precursor
          Length = 330

 Score =  411 bits (1057), Expect = e-114
 Identities = 221/312 (70%), Positives = 266/312 (84%), Gaps = 7/312 (2%)

Query: 13  SAPLQSSSSSSSLR-KPLATSFFGTRPANTVKFRGMRIA--KPVRGGGAIGAGMNLFERF 69
           S+P  SS+   SLR  PL TSFFG   +  ++   +R+A    +R  G  GA MNLFERF
Sbjct: 21  SSPSTSSNRPCSLRILPLRTSFFGNS-SGALRVNVLRLACDNRLRCNGH-GATMNLFERF 78

Query: 70  TRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQA 129
           +RVVKSYANA++SSFEDPEKILEQ V+EMN DLTKMRQATAQVLASQK+++NKYKAA Q+
Sbjct: 79  SRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQS 138

Query: 130 SEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLES 189
           S++WY++AQLAL KG+EDLAREALKRRKSFADNA+ALK QLDQQKGVVD+LVSNTRLLES
Sbjct: 139 SDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQKGVVDNLVSNTRLLES 198

Query: 190 KIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEALGQ 249
           KIQEA++KKDTL ARA++AKT+TKV EM+G VNTSGALSAFEKMEEKVM MES+A+AL Q
Sbjct: 199 KIQEAKAKKDTLLARARTAKTATKVQEMIGTVNTSGALSAFEKMEEKVMAMESEADALTQ 258

Query: 250 LTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRSSTRTGT--PFRDADIET 307
           + +D+LEGKF MLE+SSVDDDLA+LKKELSGSSKKGELPPGRS+    T  PF+D++IE 
Sbjct: 259 IGTDELEGKFQMLETSSVDDDLADLKKELSGSSKKGELPPGRSTVAASTRYPFKDSEIEN 318

Query: 308 ELEQLRQRSKEF 319
           EL +LR+++ +F
Sbjct: 319 ELNELRRKANDF 330


>Y617_SYNY3 (Q55707) Hypothetical protein sll0617
          Length = 267

 Score =  211 bits (536), Expect = 3e-54
 Identities = 118/263 (44%), Positives = 175/263 (65%), Gaps = 10/263 (3%)

Query: 63  MNLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENK 122
           M LF+R  RVV++  N +VS  EDPEK+LEQAV++M +DL ++RQA A+ +A +KR E +
Sbjct: 1   MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQR 60

Query: 123 YKAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVS 182
               TQ +++W  +A+LAL  GEE+LAREAL R+KS  D A+A + QL QQ+ + ++L  
Sbjct: 61  LNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRR 120

Query: 183 NTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMES 242
           N   LE+KI EA++KK+ L+ARA++AK + ++ + LG + TS A SAFE+ME KV+ ME+
Sbjct: 121 NLAALEAKISEAKTKKNMLQARAKAAKANAELQQTLGGLGTSSATSAFERMENKVLDMEA 180

Query: 243 QAEALGQLTSDDLEGKFAMLESSS-VDDDLANLKKELSGSSKKG--------ELPPGRSS 293
            ++A G+L    +E +FA LE+SS V+D+LA LK  ++G +  G        E  P  SS
Sbjct: 181 TSQAAGELAGFGIENQFAQLEASSGVEDELAALKASMAGGALPGTSAATPQLEAAPVDSS 240

Query: 294 TRTGTPFR-DADIETELEQLRQR 315
                  + DA I+ EL+ LR+R
Sbjct: 241 VPANNASQDDAVIDQELDDLRRR 263


>PSPA_DEIRA (Q9RUB7) Phage shock protein A homolog
          Length = 223

 Score =  135 bits (341), Expect = 1e-31
 Identities = 78/223 (34%), Positives = 128/223 (56%), Gaps = 2/223 (0%)

Query: 63  MNLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENK 122
           M++F+R +R++++  N ++S  EDP KI++QA+ +M       R   A  +A   ++E +
Sbjct: 1   MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLERE 60

Query: 123 YKAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVS 182
               ++ + E+ +KA+ AL+ G EDLAREAL+R ++  D A     Q   Q+  VD L +
Sbjct: 61  AGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKT 120

Query: 183 NTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMES 242
             R LE+KI E  SKK  L AR ++A+    +  + G     GA+ AF +ME+KV  ME 
Sbjct: 121 QLRALEAKIDEMESKKTLLAARQKTAQAGETLDRVSGFSKAGGAMDAFNEMEQKVAGMED 180

Query: 243 QAEALGQLTSD-DLEGKFAML-ESSSVDDDLANLKKELSGSSK 283
           + +A+G+L +D D + +   L     VDD LA LK ++  S++
Sbjct: 181 RNKAMGELRNDQDFDAQLKDLGRDKDVDDALAALKAKVQSSNQ 223


>PSPA_ECOLI (P23853) Phage shock protein A
          Length = 221

 Score =  116 bits (290), Expect = 8e-26
 Identities = 65/215 (30%), Positives = 117/215 (54%), Gaps = 1/215 (0%)

Query: 65  LFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYK 124
           +F RF  +V +  NA++   EDP+K++   + EM D L ++R  +A+ LA +K++  + +
Sbjct: 2   IFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIE 61

Query: 125 AATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNT 184
            A+    EW  KA+LAL K  EDLAR AL  ++   D   +L+ ++      +  +    
Sbjct: 62  QASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEI 121

Query: 185 RLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQA 244
             LE+K+ E R+++  L  R Q+A +S  V   L +     A++ FE  E ++  ME++A
Sbjct: 122 GELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEA 181

Query: 245 EALGQLTSDDLEGKFAMLES-SSVDDDLANLKKEL 278
           E+        L+ +FA L++  ++ + LA LK ++
Sbjct: 182 ESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKM 216


>PSPA_BACSU (P54617) Phage shock protein A homolog
          Length = 226

 Score =  108 bits (269), Expect = 2e-23
 Identities = 75/229 (32%), Positives = 124/229 (53%), Gaps = 21/229 (9%)

Query: 64  NLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKY 123
           ++  RF  ++ +  NA++   E+PEK+++Q +  MN DL K++  TA V+A ++R + +Y
Sbjct: 1   SIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAVMAEEQRAKREY 60

Query: 124 KAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKA-------QLDQQKGV 176
                  E+    A  ALQ G E  AR+ L+R+ S     S L+A          Q + +
Sbjct: 61  HECQADMEKMESYAMKALQAGNESDARKFLERKTSLESKLSELQAANQIAATNAAQMRKM 120

Query: 177 VDSLVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNV-NTSGALSAFEKMEE 235
            D LVS+       I E  ++K+ +KA+   AKT  +++++  +V +TS ++SAF +ME+
Sbjct: 121 HDKLVSD-------IGELEARKNMIKAKWAVAKTQERMNKLGASVSSTSQSMSAFGRMED 173

Query: 236 KVMTMESQAEALGQLTS------DDLEGKFAMLESSSVDDDLANLKKEL 278
           KV     QA A+ +L S       DL  K+    SS VDD+LA LK ++
Sbjct: 174 KVNKALDQANAMAELNSAPQDDMADLSAKYDTGGSSQVDDELAALKAKM 222


>YVQH_BACSU (O32201) Hypothetical protein yvqH
          Length = 225

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 55/197 (27%), Positives = 97/197 (48%), Gaps = 10/197 (5%)

Query: 81  VSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEEWYRKAQLA 140
           +   E+P+ +L Q V +M  D+ K +Q   +      + + KY+ A + + +   +AQLA
Sbjct: 18  LDKMENPKVMLNQYVRDMESDIAKAKQTIVKQHTIAYQFKKKYEEAAEVAGKRKNQAQLA 77

Query: 141 LQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLESKIQEARSKKDT 200
              GEE+LA++AL   K     A+  KA  +Q    +  L      LE+K+Q+ + KK  
Sbjct: 78  FDAGEEELAKKALTEMKYLEGKAAEHKASYEQANSQLADLKEQLAALETKLQDVKDKKQA 137

Query: 201 LKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTME------SQAEALGQLT--- 251
           L ARA +AK    ++     +++  A   F ++E ++  ME        AEA  +LT   
Sbjct: 138 LIARANAAKAKEHMNTTFDKIDSESAYREFLRIENRIEEMEIRANYSKSAEAGTELTRKE 197

Query: 252 -SDDLEGKFAMLESSSV 267
            +DD+E +   + + S+
Sbjct: 198 FADDVEAEIEKMRTLSL 214


>MYSN_ACACA (P05659) Myosin II heavy chain, non muscle
          Length = 1509

 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 60/273 (21%), Positives = 119/273 (42%), Gaps = 46/273 (16%)

Query: 73   VKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEE 132
            V+S  N +   +ED E     ++ +  +DL++  + T   LA  + +    ++  + +E 
Sbjct: 980  VESERNELQDKYED-EAAAHDSLKKKEEDLSRELRETKDALADAENISETLRSKLKNTER 1038

Query: 133  WYRKAQLALQKGEEDLAREAL---KRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLES 189
                 +  L    +D+    L   K +KS  +  +  +AQL+++K   ++  S  + L  
Sbjct: 1039 GADDVRNEL----DDVTATKLQLEKTKKSLEEELAQTRAQLEEEKSGKEAASSKAKQLGQ 1094

Query: 190  KIQEARSKKDTLKARAQSAKTSTK--------VSEMLGNVNTSGALSAFEK--MEEKVMT 239
            ++++ARS+ D+LK++  +A+ S K        + E L +  T  A    +K  +E K+  
Sbjct: 1095 QLEDARSEVDSLKSKLSAAEKSLKTAKDQNRDLDEQLEDERTVRANVDKQKKALEAKLTE 1154

Query: 240  MESQAEAL-GQLTS-------------------DDLEGKFAMLESSSVD--DDLANLKKE 277
            +E Q  AL GQ  +                   ++ E   A LE    +  D++A L  +
Sbjct: 1155 LEDQVTALDGQKNAAAAQAKTLKTQVDETKRRLEEAEASAARLEKERKNALDEVAQLTAD 1214

Query: 278  LSGSSKKGELPPGRSSTRTGTPFRDADIETELE 310
            L      G     + +TR       +++++ELE
Sbjct: 1215 LDAERDSGAQQRRKLNTRI------SELQSELE 1241


>RA50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase
          Length = 876

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 42/254 (16%)

Query: 90  ILEQAVLEMNDDLTKMRQATAQVLASQKRMENK------YKAATQASEEWYRKAQLALQ- 142
           +  +AV     ++ K+ +AT +    +KR+ ++      +K A + + E  R A+  L+ 
Sbjct: 130 VFREAVYIRQGEIAKLVEATRE---ERKRIVDRTLGLAEFKKAREQAHELLRVAEAKLET 186

Query: 143 --------KG-EEDLAR-----EALKRR-KSFADNASALKAQLDQ---QKGVVDSLVSNT 184
                   KG +++L R     E LKR  K        LK +L++    K   + L    
Sbjct: 187 FRERVRDLKGSKKELKRVERELEELKREVKELEPEVEELKERLNELREAKREFERLEGEL 246

Query: 185 RLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQA 244
           RLLE+KI+  + ++D L+   +  K + +  + LG+V      S   ++E +   +  + 
Sbjct: 247 RLLENKIESLKGRRDDLRKLVEEGKEAERELQRLGDVP-----SKVRELENEEAELRRRI 301

Query: 245 EALGQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRSSTRTGTPFRDAD 304
           E L  L  DDL      LES+  +++L  +K+EL     +  + P R        F+D  
Sbjct: 302 EELRNLL-DDLRSLRNRLESA--EEELEGVKRELEELKDEAGVDPERL-----VEFKDKI 353

Query: 305 IETELEQLRQRSKE 318
           +E   E+LR   +E
Sbjct: 354 VEAS-ERLRDLRRE 366



 Score = 32.0 bits (71), Expect = 2.1
 Identities = 44/195 (22%), Positives = 77/195 (38%), Gaps = 29/195 (14%)

Query: 82  SSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEEWYRKAQ--- 138
           S  ED E+ L +   E +    K+R+A  + L     +E K K A +A +E  R  +   
Sbjct: 575 SGVEDVEEELRRLEEERDHVGQKLREAEGE-LERYHNLEEKVKRAREARKELKRIERDLE 633

Query: 139 ---------------LALQKGEEDLAREAL----KRRKSFADNASALKAQLDQQKGVVDS 179
                          L  + G ED   E L    K+ +   D  S +K +L+  +   + 
Sbjct: 634 DAKGRLEQVERNLEGLRERYGSEDRLEEELESVEKKYERVRDKLSEVKGRLNGMEKRREE 693

Query: 180 LVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMT 239
           L    R    K +EA+ +K+ L+   +      +V     +V     L A E+   K+  
Sbjct: 694 LKKQVR----KYREAKERKERLERVVEVLSLCKEVFRYSRDVAREKVLPAVEREASKI-- 747

Query: 240 MESQAEALGQLTSDD 254
           ++  ++  G L  +D
Sbjct: 748 LQDLSDRYGSLRIED 762


>M21_STRPY (P50468) M protein, serotype 2.1 precursor
          Length = 407

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 62/270 (22%), Positives = 119/270 (43%), Gaps = 27/270 (10%)

Query: 65  LFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTK--MRQATAQVLASQKRMENK 122
           LFE+  +V + +        +D EK+ ++     ++D+ +  +RQ   +    Q+R +N 
Sbjct: 74  LFEKLDKVEEEHKKVEEEHKKDHEKLEKK-----SEDVERHYLRQLDQEYKEQQERQKNL 128

Query: 123 YKAATQASEEWYRKAQLALQKGEE--------DLAREALKRRKSFADNASALKAQLDQQK 174
            +   Q+  E  ++ Q  LQK ++        + +R++L RR   A  A+    + + QK
Sbjct: 129 EELERQSQREVEKRYQEQLQKQQQLEKEKQISEASRKSL-RRDLEASRAAKKDLEAEHQK 187

Query: 175 GVVDSLVS--NTRLLESKIQEARSKKDTLKARAQSAKTSTKVSE-----MLGNVNTSGAL 227
              +  +S  + + L   ++ +R+ K  L+A  Q  K   ++SE     +  ++  S A 
Sbjct: 188 LKEEKQISEASRKSLRRDLEASRAAKKDLEAEHQKLKEEKQISEASRQGLSRDLEASRAA 247

Query: 228 SAFEKMEEKVMTMESQ-AEALGQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSK-KG 285
               + E + +  E Q +EA  Q  S DLE   +      V+ DLA    +L    K   
Sbjct: 248 KKDLEAEHQKLKEEKQISEASRQGLSRDLEA--SREAKKKVEADLAEANSKLQALEKLNK 305

Query: 286 ELPPGRSSTRTGTPFRDADIETELEQLRQR 315
           EL  G+  +        A +E E + L+++
Sbjct: 306 ELEEGKKLSEKEKAELQAKLEAEAKALKEQ 335


>35KD_MYCTU (P31511) 35 kDa protein
          Length = 270

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 49/257 (19%), Positives = 106/257 (41%), Gaps = 26/257 (10%)

Query: 64  NLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKY 123
           N F +  + + +  ++ +    DP+  ++QA+ E       + Q  AQV+ +Q+++E + 
Sbjct: 3   NPFVKAWKYLMALFSSKIDEHADPKVQIQQAIEEAQRTHQALTQQAAQVIGNQRQLEMRL 62

Query: 124 KAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVS- 182
                  E+     + AL   ++  A     +   + + A A  AQL   +  V+ L + 
Sbjct: 63  NRQLADIEKLQVNVRQALTLADQATAAGDAAKATEYNNAAEAFAAQLVTAEQSVEDLKTL 122

Query: 183 -----------------NTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVN--- 222
                            N  +L+ KI E    +  L ++ + AK   +VS  L +++   
Sbjct: 123 HDQALSAAAQAKKAVERNAMVLQQKIAE----RTKLLSQLEQAKMQEQVSASLRSMSELA 178

Query: 223 TSGALSAFEKMEEKVMTMESQAEALGQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSS 282
             G   + +++ +K+    + A    +L    ++G+   +E + +     + + E   +S
Sbjct: 179 APGNTPSLDEVRDKIERRYANAIGSAELAESSVQGRMLEVEQAGI-QMAGHSRLEQIRAS 237

Query: 283 KKGELPPGRSSTRTGTP 299
            +GE  P   +T T  P
Sbjct: 238 MRGEALPAGGTTATPRP 254


>RRB1_MOUSE (Q99PL5) Ribosome-binding protein 1 (Ribosome receptor
            protein) (mRRp)
          Length = 1605

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 16/194 (8%)

Query: 91   LEQAVLEMNDDLTKMRQATAQVLASQKRMENK---YKAATQASEEWYRKAQLALQKGEED 147
            L Q + ++N +L +  +A+ Q    +K +E K   ++      +  +++++ ALQK  E+
Sbjct: 1030 LRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEE 1089

Query: 148  LAREALKRRKSFAD-NASALKAQLDQQK--GVVDSLVSNTRLLESKIQEARSKKDTLK-A 203
            + RE  + + S A+  A A KAQ  QQ+   +   L S+   ++SK +E  S    LK A
Sbjct: 1090 VTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEA 1149

Query: 204  RAQSAKTSTKVSEMLGNV------NTSGALSAFEKMEEKVMTMESQAEALGQLTSDDLEG 257
            RA++++ + ++  +   +      +T  + +   + + ++  +ESQ   L + TS   E 
Sbjct: 1150 RAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQVSCLEKETS---EL 1206

Query: 258  KFAMLESSSVDDDL 271
            K AM +    ++DL
Sbjct: 1207 KEAMEQQKGKNNDL 1220



 Score = 34.3 bits (77), Expect = 0.42
 Identities = 38/184 (20%), Positives = 83/184 (44%), Gaps = 27/184 (14%)

Query: 161  DNASALKAQLDQQKGVVDSLVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGN 220
            D  + LK QL +++ ++ +   +  + +SK++E   +  + KA+A + +   K  +++  
Sbjct: 896  DPVAILKRQLQEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVK-KQLVAR 954

Query: 221  VNTSGALSA------------FEKMEEKVMTMESQAE-----ALGQLTSDDLEGKFAMLE 263
                 A+ A             ++++ K+ T++ Q E      L +L  ++   + A+ +
Sbjct: 955  EQEIAAVQARMQASYRDHVKEVQQLQGKIRTLQEQLENGPNTQLARLQQENSILRDALNQ 1014

Query: 264  SSS-----VDDDLANLKKELSGSSK----KGELPPGRSSTRTGTPFRDADIETELEQLRQ 314
            ++S      + +LA L++ELS  +K    K E        R     + A  E ++ QL+ 
Sbjct: 1015 ATSQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQA 1074

Query: 315  RSKE 318
              KE
Sbjct: 1075 SHKE 1078



 Score = 30.0 bits (66), Expect = 8.0
 Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 20/201 (9%)

Query: 73   VKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEE 132
            ++S  + +     + ++ +EQ   + ND   K  +A   +  +++  E K ++ TQA EE
Sbjct: 1192 LESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEE 1251

Query: 133  WYRKAQLALQKGEEDLAR----EALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLE 188
              ++  LA  + +E L       ++   +++A+     K +  +      +L  +  ++ 
Sbjct: 1252 SEKQLHLAEAQTKETLLALLPGLSISAHQNYAEWLQEFKEKGSELLKKPPTLEPSMDIV- 1310

Query: 189  SKIQEARSKKDTLKARAQSAKT--------------STKVSEMLGNVNTSGALSAFEKME 234
             K++EA   +++L+A     +T              S +  E +       A     K  
Sbjct: 1311 LKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWKAKVGAAEEELHKSR 1370

Query: 235  EKVMTMESQAEAL-GQLTSDD 254
              V  +E   E L G+L S D
Sbjct: 1371 VTVKHLEDIVEKLKGELESSD 1391


>TRIP_HUMAN (Q9BWF2) TRAF-interacting protein
          Length = 469

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 17/213 (7%)

Query: 83  SFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEEWYRKAQLALQ 142
           S +D EK   Q +++   D  + R AT  V++ Q+ +    KA    S    +   L  Q
Sbjct: 91  SQKDKEKRDSQVIIDTLRDTLEERNAT--VVSLQQALG---KAEMLCSTLKKQMKYLEQQ 145

Query: 143 KGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLESKIQEARSKKDTLK 202
           + E   A+E  +R +S       ++  L  Q+  V+ ++ +  + +S +++      +LK
Sbjct: 146 QDETKQAQEEARRLRSKMKTMEQIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVSLK 205

Query: 203 ARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEAL-GQLTSDDLEGKFAM 261
              ++ K + K S  +            +K+ + + +  S+ + +  +L    LE K A 
Sbjct: 206 KEYENLKEARKASGEVA-----------DKLRKDLFSSRSKLQTVYSELDQAKLELKSAQ 254

Query: 262 LESSSVDDDLANLKKELSGSSKKGELPPGRSST 294
            +  S D ++ +LKK+L+   +   LPP  S T
Sbjct: 255 KDLQSADKEIMSLKKKLTMLQETLNLPPVASET 287


>SLA2_YEAST (P33338) SLA2 protein (Transmembrane protein MOP2)
          Length = 968

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 51/244 (20%), Positives = 99/244 (39%), Gaps = 22/244 (9%)

Query: 90  ILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEEWYRKAQLALQKGEEDLA 149
           I  QA  +M  D    +QA  Q    Q R+E +     Q  +      Q  LQK ++D+ 
Sbjct: 347 IFPQATAQMQPDFWANQQA--QFANEQNRLEQERVQQLQQQQAQQELFQQQLQKAQQDMM 404

Query: 150 REALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLESKI--------QEARSKKDTL 201
              L+++    ++  AL  Q ++ + ++       + LES+I        ++  +K + L
Sbjct: 405 NMQLQQQNQHQNDLIALTNQYEKDQALLQQYDQRVQQLESEITTMDSTASKQLANKDEQL 464

Query: 202 KARAQSAKTSTKVSEMLGNVNTS------GALSAFEKMEEKVMTMESQAEALGQLTSDDL 255
            A         +  E L  + +         L  F+K++ KV + +   +   QL    L
Sbjct: 465 TALQDQLDVWERKYESLAKLYSQLRQEHLNLLPRFKKLQLKVNSAQESIQKKEQL-EHKL 523

Query: 256 EGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRSSTRTGT-----PFRDADIETELE 310
           + K   +     D D A L+ E S ++ + +     ++  T T     P  DA +E+ + 
Sbjct: 524 KQKDLQMAELVKDRDRARLELERSINNAEADSAAATAAAETMTQDKMNPILDAILESGIN 583

Query: 311 QLRQ 314
            +++
Sbjct: 584 TIQE 587


>REST_HUMAN (P30622) Restin (Cytoplasmic linker protein-170 alpha-2)
           (CLIP-170) (Reed-Sternberg intermediate filament
           associated protein)
          Length = 1427

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 26/233 (11%)

Query: 68  RFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQV---------LASQKR 118
           +  +V+K   N++ +     +K  +Q ++EM D L K+++A  +V            Q +
Sbjct: 687 KLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTK 746

Query: 119 MENKYKAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVD 178
           + + + +  +A+EE       AL+K   +   E  K R+        +K  L+ +K    
Sbjct: 747 VIDNFTSQLKATEEKLLDLD-ALRKASSEGKSEMKKLRQQLEAAEKQIK-HLEIEKNAES 804

Query: 179 SLVSN-TRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGN---VNTSGALSAFEKME 234
           S  S+ TR L+ +  +  + ++ L   +Q  +T  K  ++L       +  A+S    M+
Sbjct: 805 SKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ 864

Query: 235 EKVMTMESQAEALGQLTSD---------DLEGKFAMLESSSVDDDLANLKKEL 278
           E V  +  + E    L+SD         D+E KF   E    ++ L   K++L
Sbjct: 865 ETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFR--EKDEREEQLIKAKEKL 915



 Score = 34.7 bits (78), Expect = 0.32
 Identities = 47/218 (21%), Positives = 90/218 (40%), Gaps = 25/218 (11%)

Query: 95   VLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEEWYRKAQLALQKGEEDLAREALK 154
            V E+N     +     ++   +K +E   +AA Q S++       ALQ+    LA E  +
Sbjct: 1123 VEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLS-----ALQEENVKLAEELGR 1177

Query: 155  RRKSFADNASALKAQLDQQKGVVDSLVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKV 214
             R     +      +L++++ V+     N +LLE K +E++  KD  + +A   K+ +  
Sbjct: 1178 SRDEVTSHQ-----KLEEERSVL-----NNQLLEMKKRESKFIKDADEEKASLQKSISIT 1227

Query: 215  SEMLGNVNTSGALSAFEKMEEKVMTMESQAEALGQLTSDDLEGKFAMLESSSVDDDLANL 274
            S +L   +     +  EK+  +V  +  +       ++  L      LES  V  +L   
Sbjct: 1228 SALLTEKD-----AELEKLRNEVTVLRGE-----NASAKSLHSVVQTLESDKVKLELKVK 1277

Query: 275  KKELSGSSKKGELPPGRSSTRTGTPFRDADIETELEQL 312
              EL     K +L     +T T     +   E++++ L
Sbjct: 1278 NLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDFL 1315


>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform
            (MyHC-beta)
          Length = 1935

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 68/303 (22%), Positives = 116/303 (37%), Gaps = 65/303 (21%)

Query: 79   AIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYK----------AATQ 128
            A+ S  +   K L+  + E+ ++L   R A A+V   +  +  + +           AT 
Sbjct: 1099 ALGSQLQKKLKELQARIEELEEELESERTARAKVEKLRSDLSRELEEISERLEEAGGATS 1158

Query: 129  ASEEWYRKAQLALQKGEEDLAREALKR-------RKSFADNASALKAQLDQQKGV----- 176
               E  +K +   QK   DL    L+        RK  AD+ + L  Q+D  + V     
Sbjct: 1159 VQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLE 1218

Query: 177  ---------VDSLVSN--------------TRLLESKIQEARSKKDTLK-----ARAQSA 208
                     +D + SN               R LE ++ E RSK +  +       +Q A
Sbjct: 1219 KEKSEFKLELDDVTSNMEQIIKAKANLEKMCRTLEDQMNEHRSKAEETQRSVNDLTSQRA 1278

Query: 209  KTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEALGQLTSDDLEGKFAM---LESS 265
            K  T+  E+   ++   AL    ++    +T   Q E L +   ++++ K A+   L+S+
Sbjct: 1279 KLQTENGELSRQLDEKEAL--ISQLTRGKLTYTQQLEDLKRQLEEEVKAKNALAHALQSA 1336

Query: 266  SVDDDL--------ANLKKELSG--SSKKGELPPGRSSTRTGTPFRDADIETELEQLRQR 315
              D DL           K EL    S    E+   R+   T    R  ++E   ++L QR
Sbjct: 1337 RHDCDLLREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQR 1396

Query: 316  SKE 318
             +E
Sbjct: 1397 LQE 1399



 Score = 33.5 bits (75), Expect = 0.72
 Identities = 51/252 (20%), Positives = 104/252 (41%), Gaps = 38/252 (15%)

Query: 91   LEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQ-----------------ASEEW 133
            LE    E+  D+  +    A+V   +   ENK K  T+                 A +E 
Sbjct: 943  LEDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEA 1002

Query: 134  YRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGV-------VDSLVSNTRL 186
            +++A   LQ  EED      K +         L+  L+Q+K V          L  + +L
Sbjct: 1003 HQQALDDLQ-AEEDKVNTLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKL 1061

Query: 187  LESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEA 246
             +  I +  + K  L  R +  K   +++ +   +    AL +  ++++K+  ++++ E 
Sbjct: 1062 TQESIMDLENDKQQLDERLK--KKDFELNALNARIEDEQALGS--QLQKKLKELQARIEE 1117

Query: 247  LGQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRSSTRTGTPFRDADIE 306
            L     ++LE +      + V+   ++L +EL   S++ E   G +S +      +   E
Sbjct: 1118 L----EEELESE--RTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIE---MNKKRE 1168

Query: 307  TELEQLRQRSKE 318
             E +++R+  +E
Sbjct: 1169 AEFQKMRRDLEE 1180



 Score = 32.7 bits (73), Expect = 1.2
 Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 31/206 (15%)

Query: 79   AIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRM-------ENKYKAATQASE 131
            A+V   E   K+ EQ ++E ++ +  +      ++  +K+M       + + + A Q   
Sbjct: 1690 AVVEQTERSRKLAEQELIETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECR 1749

Query: 132  EWYRKAQLALQ---------KGEEDLAREALKRRKSFADNASALKAQLDQQKGV------ 176
                KA+ A+          K E+D +    + +K+       L+ +LD+ + +      
Sbjct: 1750 NAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGK 1809

Query: 177  --VDSLVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEML-----GNVNTSGALSA 229
              +  L +  R LE+++ EA  K++    +    K+  ++ E+         N       
Sbjct: 1810 KQLQKLEARVRELENEL-EAEQKRNAESVKGM-RKSERRIKELTYQTEEDRKNLLRLQDL 1867

Query: 230  FEKMEEKVMTMESQAEALGQLTSDDL 255
             +K++ KV   + QAE   +  + +L
Sbjct: 1868 VDKLQLKVKAYKRQAEEAEEQANTNL 1893


>SMC2_CHICK (Q90988) Structural maintenance of chromosome 2
           (Chromosome scaffold protein ScII)
          Length = 1189

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 53/224 (23%), Positives = 93/224 (40%), Gaps = 35/224 (15%)

Query: 103 TKMRQATAQVLASQKRMENKYKAATQASEEWYRKAQL--------ALQKGEEDLAREALK 154
           T   +AT + LA+ K M  KY+   Q  E    +A+L        A  K +EDL    L 
Sbjct: 692 TSQLEATEKELANLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQEDL----LA 747

Query: 155 RRKSFADNASALKAQLDQQKGVVDSLVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKV 214
            +K+ A+    LK   + Q+   +      + LE+K++ A +++      AQ    S K 
Sbjct: 748 LKKTIAECEETLKKTEESQRKAEEEY----KALENKMKNAEAERGKEIKNAQQKLNSAK- 802

Query: 215 SEMLGNVNTSGALSAFEKMEEKVMTMESQAEALGQLTSDDLEGKFAMLESSSVDDDLANL 274
                      A  +  KM+EK   +E+    L QL  +    K    +S +    +A+L
Sbjct: 803 ---------KKADDSSRKMKEKQQEVEALVLELEQLKQEQASYK---QQSEAAQQAIASL 850

Query: 275 KKELSGSSKKGELPPGRSSTRTGTPFRDADIETELEQLRQRSKE 318
           K+++S       L      TR      + ++ +E   + +R+K+
Sbjct: 851 KEQVSA------LEAEAVKTRESLKNAENELSSEKGLMEERTKD 888



 Score = 33.9 bits (76), Expect = 0.55
 Identities = 47/239 (19%), Positives = 90/239 (36%), Gaps = 20/239 (8%)

Query: 82   SSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKA-------------ATQ 128
            +S++   +  +QA+  + + ++ +     +   S K  EN+  +             A  
Sbjct: 834  ASYKQQSEAAQQAIASLKEQVSALEAEAVKTRESLKNAENELSSEKGLMEERTKDIKAKS 893

Query: 129  ASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLE 188
            A  E YR+    LQ     L  +  K ++  AD +S L   L + K +        +   
Sbjct: 894  AKIEKYREQNNELQLSINALEHDINKYQQETADASSTLDKLLKEYKWIASEKELFGQADT 953

Query: 189  SKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEK-----MEEKVMTMESQ 243
            +   EA + K+T   + Q   T  +  E   N+     LS  E+     M++K M    +
Sbjct: 954  TYDFEANNPKET-GQKLQKLLTKKEKLEKSLNMRAMNLLSEAEERYNDLMKKKRMVENDK 1012

Query: 244  AEALGQLTS-DDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRSSTRTGTPFR 301
             + L  +   D  + K   +    V+ D  ++   L   +K   +P  + +   G  FR
Sbjct: 1013 IKILATIEELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSKKQNILDGLEFR 1071


>MYSS_CYPCA (Q90339) Myosin heavy chain, fast skeletal muscle
          Length = 1935

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 54/249 (21%), Positives = 108/249 (42%), Gaps = 32/249 (12%)

Query: 91   LEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQ--ASEEW----YRKAQLALQKG 144
            LE    E+  D+  +    A+V   +   ENK K  T+  AS++       K + ALQ+ 
Sbjct: 944  LEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMASQDESIAKLTKEKKALQEA 1003

Query: 145  ----------EEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLESKIQEA 194
                      EED      K +         L+  L+Q+K +   L    R LE  ++ A
Sbjct: 1004 HQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLA 1063

Query: 195  RSKKDTLKARAQSA-----KTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEALGQ 249
            +     L+   Q +     K   ++S++L  +    +L A  ++++K+  ++++ E L  
Sbjct: 1064 QESIMDLENEKQQSDEKIKKKDFEISQLLSKIEDEQSLGA--QLQKKIKELQARIEEL-- 1119

Query: 250  LTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRSSTRTGTPFRDADIETEL 309
               +++E + A    + V+   A+L +EL   S++ E   G ++ +      +   E E 
Sbjct: 1120 --EEEIEAERA--ARAKVEKQRADLSRELEEISERLEEAGGATAAQIE---MNKKREAEF 1172

Query: 310  EQLRQRSKE 318
            +++R+  +E
Sbjct: 1173 QKMRRDLEE 1181


>MYH4_RABIT (Q28641) Myosin heavy chain, skeletal muscle, juvenile
          Length = 1938

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 41/175 (23%), Positives = 79/175 (44%), Gaps = 16/175 (9%)

Query: 80   IVSSFEDPEKILEQAVLE---MNDDLTKMRQATAQVLASQKRMENKYKAATQASEEWYRK 136
            IV    + E+  ++A+ +   M ++L K +  +A +   +K ME   K      +E    
Sbjct: 1747 IVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQHRLDE---A 1803

Query: 137  AQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGV------VDSLVSNTRLLESK 190
             QLAL+ G++ + +   + R+  A+  S  K  ++  KG+      V  L   T      
Sbjct: 1804 EQLALKGGKKQIQKLEARVRELEAEVESEQKRNVEAVKGLRKHERRVKELTYQTEEDRKN 1863

Query: 191  IQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAE 245
            +   +   D L+A+ +S K   + +E   N+N    LS F K++ ++   E +A+
Sbjct: 1864 VLRLQDLVDKLQAKVKSYKRQAEEAEEQCNIN----LSKFRKLQHELEEAEERAD 1914



 Score = 38.5 bits (88), Expect = 0.022
 Identities = 59/303 (19%), Positives = 114/303 (37%), Gaps = 65/303 (21%)

Query: 79   AIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYK----------AATQ 128
            A+    +   K L+  + E+ +++   R + A+    +  +  + +           AT 
Sbjct: 1102 ALAMQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATS 1161

Query: 129  ASEEWYRKAQLALQKGEEDLAREALKR-------RKSFADNASALKAQLDQQKGV----- 176
            A  E  +K +   QK   DL    L+        RK  AD+ + L  Q+D  + V     
Sbjct: 1162 AQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLE 1221

Query: 177  ---------VDSLVSN--------------TRLLESKIQEARSKKDTLK-----ARAQSA 208
                     +D L SN               R LE ++ E ++K++  +       AQ A
Sbjct: 1222 KEKSELKMEIDDLASNMETVSKAKGNLEKMCRTLEDQVSELKTKEEEHQRLINDLSAQRA 1281

Query: 209  KTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEALGQLTSDDLEGKFAM---LESS 265
            +  T+  E    ++   +L    ++         Q E L +   ++++ K A+   L+S+
Sbjct: 1282 RLQTESGEFSRQLDEKDSL--VSQLSRGKQAFTQQIEELKRQLEEEIKAKSALAHALQSA 1339

Query: 266  SVDDDL----------ANLKKELSGSSKKGELPPGRSSTRTGTPFRDADIETELEQLRQR 315
              D DL          A  + + + S    E+   R+   T    R  ++E   ++L QR
Sbjct: 1340 RHDCDLLREQYEEEQEAKAELQRAMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQR 1399

Query: 316  SKE 318
             ++
Sbjct: 1400 LQD 1402



 Score = 35.8 bits (81), Expect = 0.15
 Identities = 49/250 (19%), Positives = 103/250 (40%), Gaps = 34/250 (13%)

Query: 91   LEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQ-----------------ASEEW 133
            LE    E+  D+  +    A+V   +   ENK K  T+                 A +E 
Sbjct: 946  LEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLTKEKKALQEA 1005

Query: 134  YRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLESKIQE 193
            +++    LQ  EED      K +         L+  L+Q+K +   L    R LE  ++ 
Sbjct: 1006 HQQTLDDLQ-AEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEGDLKL 1064

Query: 194  ARS-----KKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEALG 248
            A+      + D  +   +  K   ++S +   +    AL+   ++++K+  ++++ E L 
Sbjct: 1065 AQESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAM--QLQKKIKELQARIEEL- 1121

Query: 249  QLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRSSTRTGTPFRDADIETE 308
                +++E + A    +  +   ++L +EL   S++ E   G +S +      +   E E
Sbjct: 1122 ---EEEIEAERA--SRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE---MNKKREAE 1173

Query: 309  LEQLRQRSKE 318
             +++R+  +E
Sbjct: 1174 FQKMRRDLEE 1183


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.309    0.123    0.316 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,951,788
Number of Sequences: 164201
Number of extensions: 1125916
Number of successful extensions: 5044
Number of sequences better than 10.0: 434
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 4659
Number of HSP's gapped (non-prelim): 730
length of query: 319
length of database: 59,974,054
effective HSP length: 110
effective length of query: 209
effective length of database: 41,911,944
effective search space: 8759596296
effective search space used: 8759596296
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)