BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137669.5 + phase: 0 
         (58 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

LEU3_NEIMB (Q9JZI9) 3-isopropylmalate dehydrogenase (EC 1.1.1.85...    28  4.5
LEU3_NEIMA (Q9JU79) 3-isopropylmalate dehydrogenase (EC 1.1.1.85...    28  4.5

>LEU3_NEIMB (Q9JZI9) 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
          (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 356

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 20 LTTVIALGTAAVAWSYLPAGGESYSAEDHPVPK 52
          L  +IA G  A  + Y P GGE+Y    HP P+
Sbjct: 25 LDKLIAQGLDA-GYEYAPLGGEAYDEYGHPYPE 56


>LEU3_NEIMA (Q9JU79) 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
          (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 356

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 10/22 (45%), Positives = 13/22 (58%)

Query: 31 VAWSYLPAGGESYSAEDHPVPK 52
          V + Y P GGE+Y    HP P+
Sbjct: 35 VGYEYAPLGGEAYDEYGHPYPE 56


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.313    0.126    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,344,371
Number of Sequences: 164201
Number of extensions: 216620
Number of successful extensions: 430
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 429
Number of HSP's gapped (non-prelim): 2
length of query: 58
length of database: 59,974,054
effective HSP length: 34
effective length of query: 24
effective length of database: 54,391,220
effective search space: 1305389280
effective search space used: 1305389280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)