BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137669.1 - phase: 0 
         (284 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ZAR1_FUGRU (Q7T3T9) Zygote arrest 1 (Oocyte-specific maternal ef...    32  1.4
DYSF_MOUSE (Q9ESD7) Dysferlin (Dystrophy associated fer-1 like p...    32  1.8
YHR8_SCHPO (Q8WZK2) Protein C839.08c in chromosome II                  31  3.9
UBP2_CHICK (O57429) Ubiquitin carboxyl-terminal hydrolase 2 (EC ...    31  3.9
ZAR1_BRARE (Q7T3T8) Zygote arrest 1 (Oocyte-specific maternal ef...    30  5.1
PPIC_MOUSE (P30412) Peptidyl-prolyl cis-trans isomerase C (EC 5....    30  5.1
PPIC_HUMAN (P45877) Peptidyl-prolyl cis-trans isomerase C (EC 5....    30  5.1
CAJ1_YEAST (P39101) CAJ1 protein                                       30  5.1
YTC8_BACAN (Q9RN02) Hypothetical protein pXO2-29/pXO2-30/BXB0028...    30  6.7
DYSF_HUMAN (O75923) Dysferlin (Dystrophy associated fer-1-like p...    30  6.7
CIN8_CANGA (Q6FXI5) Kinesin-like protein CIN8                          30  6.7
TRUA_UREPA (Q9PPV4) tRNA pseudouridine synthase A (EC 4.2.1.70) ...    30  8.8

>ZAR1_FUGRU (Q7T3T9) Zygote arrest 1 (Oocyte-specific maternal
           effect factor)
          Length = 320

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 7   RETRMKVEQVLHMNGGIGETSYSNNSLLQKKVI------SLTKEMRDEAIKNLYCKTFPK 60
           R+   K +  L   G   E ++SN    Q K I       LT  +R    K++  +  PK
Sbjct: 28  RDAGWKYKSYLSHYGDTSE-AFSNQQRAQLKSILSQINPKLTPRLRKANTKDVAVQVNPK 86

Query: 61  RLGIADLGCSSGPNTLLVISEVIKLVDKL 89
           R   A + CS GP TLLV+   ++   KL
Sbjct: 87  R--DASVQCSIGPRTLLVVKRELRRRRKL 113


>DYSF_MOUSE (Q9ESD7) Dysferlin (Dystrophy associated fer-1 like
            protein) (Fer-1 like protein 1)
          Length = 2083

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 17/63 (26%), Positives = 27/63 (41%)

Query: 50   IKNLYCKTFPKRLGIADLGCSSGPNTLLVISEVIKLVDKLCQEHNHESPEYQVFMNDLQG 109
            ++N     F  R G+    C SGPN         +L+   CQ+H  ++P Y+      Q 
Sbjct: 1669 LENRLLSKFGARCGLPQTCCVSGPNKWRDKLRPSQLLHLFCQQHRIKAPVYRTDRVTFQD 1728

Query: 110  NDF 112
             D+
Sbjct: 1729 KDY 1731


>YHR8_SCHPO (Q8WZK2) Protein C839.08c in chromosome II
          Length = 935

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 29/114 (25%), Positives = 47/114 (40%), Gaps = 23/114 (20%)

Query: 62  LGIADLGCSSGPNTLLVIS-------EVIKLVDKLCQEHNHESPEYQVFMNDLQGNDFNN 114
           LGI  +G +  P+++  +        ++ +LVDK+   +N++     VF  D   +DF +
Sbjct: 217 LGIDTIGHNKHPDSVEYVENIQYIDGKIQELVDKMNNYYNNDGASSWVFTADHGMSDFGS 276

Query: 115 IFRLLDRFTEKLNDEVEDGIGGPIFFYGAPGSFYGRIFPTKTMHFIHSSYSLQW 168
                        D   D    PI  +GA     G   PT   ++ H  YSL W
Sbjct: 277 -----------HGDGNLDNTRTPIIAWGA-----GIQSPTHEKNYGHDEYSLPW 314


>UBP2_CHICK (O57429) Ubiquitin carboxyl-terminal hydrolase 2 (EC
           3.1.2.15) (Ubiquitin thiolesterase 2)
           (Ubiquitin-specific processing protease 2)
           (Deubiquitinating enzyme 2) (41 kDa ubiquitin-specific
           protease)
          Length = 357

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 29/97 (29%), Positives = 44/97 (44%), Gaps = 13/97 (13%)

Query: 12  KVEQVLHMNGGIGETSYSNNSLLQKKVISLTKEMRDEAIKNLYCKTFPKRLGIADLGCSS 71
           KV Q L     +G T + N+ L   + +S TKE+RD  ++N Y         + DL  +S
Sbjct: 13  KVVQGLTGLRNLGNTCFMNSIL---QCLSNTKELRDYCLQNQY---------LRDLNNNS 60

Query: 72  GPNTLLVISEVIKLVDKLCQEHNHESPEYQVFMNDLQ 108
              T L +SE  KL+  L     ++S     F   +Q
Sbjct: 61  RMRTAL-MSEFAKLIQLLWTSSPNDSVSPSEFKTQIQ 96


>ZAR1_BRARE (Q7T3T8) Zygote arrest 1 (Oocyte-specific maternal
          effect factor)
          Length = 329

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/64 (35%), Positives = 31/64 (47%), Gaps = 8/64 (12%)

Query: 20 NGGIGETSYSNNSLLQKKVI------SLTKEMRDEAIKNLYCKTFPKRLGIADLGCSSGP 73
          N G GET + N+   Q K I      +LT  +R    K++  +  PK    A + CS GP
Sbjct: 38 NYGEGETYFDNHHRAQLKSILSQINPNLTPRLRKANTKDVGVQVNPKT--DASIQCSLGP 95

Query: 74 NTLL 77
           TLL
Sbjct: 96 RTLL 99


>PPIC_MOUSE (P30412) Peptidyl-prolyl cis-trans isomerase C (EC
           5.2.1.8) (PPIase) (Rotamase) (Cyclophilin C)
          Length = 212

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 10/59 (16%)

Query: 132 DGIGGPIFFYGAPGSFYGRIFPTKTMHFIHSSYSLQWLSQVPKGVENNKGNIYMATTSP 190
           DG GG         S YG  FP +     H  Y + W+S    G + N    ++  T P
Sbjct: 105 DGTGGM--------SIYGETFPDENFKLKH--YGIGWVSMANAGPDTNGSQFFITLTKP 153


>PPIC_HUMAN (P45877) Peptidyl-prolyl cis-trans isomerase C (EC
           5.2.1.8) (PPIase) (Rotamase) (Cyclophilin C)
          Length = 212

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 10/59 (16%)

Query: 132 DGIGGPIFFYGAPGSFYGRIFPTKTMHFIHSSYSLQWLSQVPKGVENNKGNIYMATTSP 190
           DG GG         S YG  FP +     H  Y + W+S    G + N    ++  T P
Sbjct: 105 DGTGGV--------SIYGETFPDENFKLKH--YGIGWVSMANAGPDTNGSQFFITLTKP 153


>CAJ1_YEAST (P39101) CAJ1 protein
          Length = 391

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 27/110 (24%), Positives = 50/110 (44%), Gaps = 21/110 (19%)

Query: 81  EVIKLVDKLCQEHNHESPEYQVFMNDLQGNDFNNIFRLLDRFTEKLNDEVED----GIGG 136
           +++K VD+L ++ N +   Y + +        NN    L+ FT KL+ E+ED      G 
Sbjct: 175 DMMKQVDELAEKLNEKISRYLIAVKS------NN----LEEFTRKLDQEIEDLKLESFGL 224

Query: 137 PIFFYGAPGSFYGRIFPTKTMHFIHSSYSLQWLSQVPKGVENNKGNIYMA 186
            + +         R++ TK  +FI S      +S++  G  +N  ++  A
Sbjct: 225 ELLY------LLARVYKTKANNFIMSK-KTYGISKIFTGTRDNARSVKSA 267


>YTC8_BACAN (Q9RN02) Hypothetical protein
           pXO2-29/pXO2-30/BXB0028/GBAA_pXO2_0028
          Length = 922

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 17/150 (11%)

Query: 95  HESPEYQVFMNDLQGNDFNNIFRLLDRFTEKLNDEVEDGIGGPIFFYGAPGSFYGRIFPT 154
           H   EY+    + Q N  NN++  L    + + D  ED  G  I +  +  +        
Sbjct: 454 HTPNEYRSLGKNNQINKPNNVYYDL----KCIVDSYEDSKGNVISYNTSTST------TI 503

Query: 155 KTMHFIHSSYSLQWLSQVPKGVENNKGNIYMATTSPANVLNAYHEQFQRDFSLFLKCRAE 214
              + ++ SYSLQ     P G E    N+  +T S  +      +    D  +       
Sbjct: 504 TERNTVNGSYSLQNAFFTPDGKELGTPNLGYSTVSKGDATTIVGQ----DVKMHADLNVH 559

Query: 215 ELVDGGRMVLTIWGRKSDDKY-SKECGYRA 243
            + +GG +++  W   +D  Y +KE G RA
Sbjct: 560 AVTEGGAIIVYKW--NTDSFYLTKEAGERA 587


>DYSF_HUMAN (O75923) Dysferlin (Dystrophy associated fer-1-like
            protein) (Fer-1 like protein 1)
          Length = 2080

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/52 (28%), Positives = 24/52 (45%)

Query: 50   IKNLYCKTFPKRLGIADLGCSSGPNTLLVISEVIKLVDKLCQEHNHESPEYQ 101
            ++N     F  R G+    C SGPN         +L+   CQ+H  ++P Y+
Sbjct: 1666 LENRLLSKFGARCGLPQTYCVSGPNQWRDQLRPSQLLHLFCQQHRVKAPVYR 1717


>CIN8_CANGA (Q6FXI5) Kinesin-like protein CIN8
          Length = 988

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 18/136 (13%)

Query: 7   RETRMKVEQVLHMNGGIGETSYSNNSL-LQKKVISLTKEMRDEAIKNLYCKTFPKRLGIA 65
           R+T  K  + L  NG + +T  S N + L+K+V+ + K   +EA K+ Y +     L   
Sbjct: 633 RDTLKKHIEYLQNNGDLKDTEISGNLMRLEKEVVKVIKAAEEEASKS-YGECVKMML--- 688

Query: 66  DLGCSSGPNTLLVISEVIKLVDKLCQEHNHE--------SPEYQVFMNDLQGNDF-NNIF 116
                  P     +S  +  + KL +E++ +        S EY      L  N F NN  
Sbjct: 689 ----KETPRLFESVSGRLDNISKLAEENHSKIAETLSDVSEEYNNLKQYLTNNFFKNNHE 744

Query: 117 RLLDRFTEKLNDEVED 132
            LL    +    ++E+
Sbjct: 745 ELLSHHVQNTYAQLEE 760


>TRUA_UREPA (Q9PPV4) tRNA pseudouridine synthase A (EC 4.2.1.70)
           (Pseudouridylate synthase I) (Pseudouridine synthase I)
           (Uracil hydrolyase)
          Length = 241

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 79  ISEVIKLVDKLCQEHNHESPEYQVFMNDLQGNDFNNIFRLLDRFTEKLNDE 129
           I EV K+ D    ++N  S  YQ  +ND + + F N + L     +K+ND+
Sbjct: 90  ILEVQKVDDSFHAQYNATSKTYQYVINDYEFDLFRNNYELF--VNQKINDQ 138


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.319    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,061,586
Number of Sequences: 164201
Number of extensions: 1325836
Number of successful extensions: 2874
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2872
Number of HSP's gapped (non-prelim): 12
length of query: 284
length of database: 59,974,054
effective HSP length: 109
effective length of query: 175
effective length of database: 42,076,145
effective search space: 7363325375
effective search space used: 7363325375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)