BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137553.12 + phase: 0 
         (535 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310...    41  0.007
UPPS_HAEIN (P44938) Undecaprenyl pyrophosphate synthetase (EC 2....    31  9.2

>M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310
           (ORF154)
          Length = 154

 Score = 41.2 bits (95), Expect = 0.007
 Identities = 32/106 (30%), Positives = 50/106 (46%), Gaps = 13/106 (12%)

Query: 4   VAWKKVC-ADYDEGGLGIRSLVCLNAASNMKICWDLF-QSEEQWAQVLRSRVIRNSTCIH 61
           VAW+K+C +  D+GGLG R L   N A   K  + +  Q     +++LRSR   +S+ + 
Sbjct: 42  VAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMME 101

Query: 62  -------HHVYSSIWSGAKTEFQNLIDNSNWLVGDGDTINCWLDNW 100
                   + + SI  G +   + L+      +GDG     WLD W
Sbjct: 102 CSVGTRPSYAWRSIIHGRELLSRGLLRT----IGDGIHTKVWLDRW 143


>UPPS_HAEIN (P44938) Undecaprenyl pyrophosphate synthetase (EC
           2.5.1.31) (UPP synthetase)
           (Di-trans-poly-cis-decaprenylcistransferase)
           (Undecaprenyl diphosphate synthase) (UDS)
          Length = 239

 Score = 30.8 bits (68), Expect = 9.2
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)

Query: 26  LNAASNMKICWDLFQSEEQWAQVLRSRV-----IRNSTCIHH 62
           LN A+N   CWD+ Q+ +Q A+ ++        I NST  HH
Sbjct: 131 LNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHH 172


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.136    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,981,963
Number of Sequences: 164201
Number of extensions: 2932206
Number of successful extensions: 7586
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7584
Number of HSP's gapped (non-prelim): 2
length of query: 535
length of database: 59,974,054
effective HSP length: 115
effective length of query: 420
effective length of database: 41,090,939
effective search space: 17258194380
effective search space used: 17258194380
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)