Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136973.11 - phase: 2 /pseudo
         (192 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

S6A4_DROME (P51905) Sodium-dependent serotonin transporter (5HT ...    32  1.2
Y147_MYCPN (P75585) Hypothetical protein MG147 homolog (VXpSPT7_...    31  2.0
AA2A_MOUSE (Q60613) Adenosine A2a receptor                             30  2.6
UBP7_YEAST (P40453) Ubiquitin carboxyl-terminal hydrolase 7 (EC ...    30  3.4
CRY1_ARATH (Q43125) Cryptochrome 1 apoprotein (Blue light photor...    30  4.5
AA2A_RAT (P30543) Adenosine A2a receptor                               30  4.5
CIW3_RAT (O54912) Potassium channel subfamily K member 3 (Acid-s...    29  5.9
CIW3_MOUSE (O35111) Potassium channel subfamily K member 3 (Acid...    29  5.9
AA2A_HUMAN (P29274) Adenosine A2a receptor                             29  5.9
AA2A_CANFA (P11617) Adenosine A2a receptor                             29  5.9

>S6A4_DROME (P51905) Sodium-dependent serotonin transporter (5HT
           transporter) (5HTT) (Cocaine-sensitive serotonin
           transporter) (dSERT1)
          Length = 622

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 9/48 (18%)

Query: 64  WTSCWRGVHPLVLLTTRLFSFVSLAMLLYLDIHEYDASIFYYYTEWTF 111
           W  CW  + P+ LLT  +FS +    +L  +         YYY +W++
Sbjct: 528 WRICWTYISPVFLLTIFIFSIMGYKEMLGEE---------YYYPDWSY 566


>Y147_MYCPN (P75585) Hypothetical protein MG147 homolog
           (VXpSPT7_orf377)
          Length = 377

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 23/65 (35%), Positives = 30/65 (45%), Gaps = 3/65 (4%)

Query: 74  LVLLTTRLFSFVSLAMLLYLDIHEYDASIFYYYTEW--TFTLVMIYFALGTTVSAYGCWK 131
           L LLT  L  F S   + + D H +    F   TE   TF +  + FAL   +   GCWK
Sbjct: 31  LTLLTYGLVLFSSSGRIDHGD-HFHLRERFVLTTEELVTFVVASVVFALTVALFGLGCWK 89

Query: 132 VLNKP 136
           +L  P
Sbjct: 90  LLQGP 94


>AA2A_MOUSE (Q60613) Adenosine A2a receptor
          Length = 410

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 4/98 (4%)

Query: 2   YDFVCFAIVGVSILGALWVLWTNEGSSTSQSDSNIFVESLLVANSPSSDNRVAIGHVSTS 61
           Y  V  AI  ++ILG + V W    +S  Q+ +N FV SL  A+       +      ++
Sbjct: 6   YIMVELAIAVLAILGNVLVCWAVWINSNLQNVTNFFVVSLAAADIAVGVLAIPFAITIST 65

Query: 62  QLWTSC----WRGVHPLVLLTTRLFSFVSLAMLLYLDI 95
               +C    +     LVL  + +FS +++A+  Y+ I
Sbjct: 66  GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAI 103


>UBP7_YEAST (P40453) Ubiquitin carboxyl-terminal hydrolase 7 (EC
            3.1.2.15) (Ubiquitin thiolesterase 7) (Ubiquitin-specific
            processing protease 7) (Deubiquitinating enzyme 7)
          Length = 1071

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 76   LLTTRLFSFVSLAMLLYLDIHEYDASIFYY------YTEWTFTLVMIYFALGTTVSAYGC 129
            L T +  +FV+L  +L + +     S FYY       T  T+ L++           Y  
Sbjct: 946  LTTVKTINFVTLPKILVIHL-----SRFYYDLTKKNNTVVTYPLILNIILKNNDTMKYKL 1000

Query: 130  WKVLNKPPPLQNGEMTEFLRRDLETKGSIFTFQSRYAEEE 169
            + V+N    L +G  T  + +DLE   +I   +  Y ++E
Sbjct: 1001 FGVVNHTGTLISGHYTSLVNKDLEHNVNIGRSKWYYFDDE 1040


>CRY1_ARATH (Q43125) Cryptochrome 1 apoprotein (Blue light
           photoreceptor)
          Length = 681

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 8/47 (17%)

Query: 20  VLWTNEGSSTSQSDSNIFVESL--------LVANSPSSDNRVAIGHV 58
           V W NEG+   +   N+F++S+        +  N P S  R  +GH+
Sbjct: 273 VAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHL 319


>AA2A_RAT (P30543) Adenosine A2a receptor
          Length = 410

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 4/98 (4%)

Query: 2   YDFVCFAIVGVSILGALWVLWTNEGSSTSQSDSNIFVESLLVANSPSSDNRVAIGHVSTS 61
           Y  V  AI  ++ILG + V W    +S  Q+ +N FV SL  A+       +      ++
Sbjct: 6   YITVELAIAVLAILGNVLVCWAVWINSNLQNVTNFFVVSLAAADIAVGVLAIPFAITIST 65

Query: 62  QLWTSC----WRGVHPLVLLTTRLFSFVSLAMLLYLDI 95
               +C    +     LVL  + +FS +++A+  Y+ I
Sbjct: 66  GFCAACHGCLFFACFVLVLTQSSIFSLLAIAIDRYIAI 103


>CIW3_RAT (O54912) Potassium channel subfamily K member 3
           (Acid-sensitive potassium channel protein TASK-1)
           (TWIK-related acid-sensitive K+ channel 1) (Two pore
           potassium channel KT3.1)
          Length = 411

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 19/60 (31%), Positives = 24/60 (39%), Gaps = 5/60 (8%)

Query: 81  LFSFVSLAMLLYLDIHEYDASIFYYYTEWTFTLVMIYFALGTTVSAYGCWKVLNKPPPLQ 140
           L  FVS    L +      A+ F YY  WTF     Y  +  T   +G +  L K   LQ
Sbjct: 161 LIGFVSCISTLCIG-----AAAFSYYERWTFFQAYYYCFITLTTIGFGDYVALQKDQALQ 215


>CIW3_MOUSE (O35111) Potassium channel subfamily K member 3
           (Acid-sensitive potassium channel protein TASK-1)
           (TWIK-related acid-sensitive K+ channel 1) (Cardiac
           two-pore background K+ channel) (cTBAK-1) (Two pore
           potassium channel KT3.1)
          Length = 409

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 19/60 (31%), Positives = 24/60 (39%), Gaps = 5/60 (8%)

Query: 81  LFSFVSLAMLLYLDIHEYDASIFYYYTEWTFTLVMIYFALGTTVSAYGCWKVLNKPPPLQ 140
           L  FVS    L +      A+ F YY  WTF     Y  +  T   +G +  L K   LQ
Sbjct: 161 LIGFVSCISTLCIG-----AAAFSYYERWTFFQAYYYCFITLTTIGFGDYVALQKDQALQ 215


>AA2A_HUMAN (P29274) Adenosine A2a receptor
          Length = 412

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 4/98 (4%)

Query: 2   YDFVCFAIVGVSILGALWVLWTNEGSSTSQSDSNIFVESLLVANSPSSDNRVAIGHVSTS 61
           Y  V  AI  ++ILG + V W    +S  Q+ +N FV SL  A+       +      ++
Sbjct: 9   YITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST 68

Query: 62  QLWTSC----WRGVHPLVLLTTRLFSFVSLAMLLYLDI 95
               +C    +     LVL  + +FS +++A+  Y+ I
Sbjct: 69  GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAI 106


>AA2A_CANFA (P11617) Adenosine A2a receptor
          Length = 412

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 4/98 (4%)

Query: 2   YDFVCFAIVGVSILGALWVLWTNEGSSTSQSDSNIFVESLLVANSPSSDNRVAIGHVSTS 61
           Y  V  AI  ++ILG + V W    +S  Q+ +N FV SL  A+       +      ++
Sbjct: 9   YITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST 68

Query: 62  QLWTSC----WRGVHPLVLLTTRLFSFVSLAMLLYLDI 95
               +C    +     LVL  + +FS +++A+  Y+ I
Sbjct: 69  GFCAACHNCLFFACFVLVLTQSSIFSLLAIAIDRYIAI 106


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.137    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,554,710
Number of Sequences: 164201
Number of extensions: 794398
Number of successful extensions: 2470
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2467
Number of HSP's gapped (non-prelim): 10
length of query: 192
length of database: 59,974,054
effective HSP length: 104
effective length of query: 88
effective length of database: 42,897,150
effective search space: 3774949200
effective search space used: 3774949200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)


Medicago: description of AC136973.11