BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136954.5 - phase: 0 
         (362 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

5H4_MOUSE (P97288) 5-hydroxytryptamine 4 receptor (5-HT-4) (Sero...    35  0.39
5H4_RAT (Q62758) 5-hydroxytryptamine 4 receptor (5-HT-4) (Seroto...    34  0.51
YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in c...    30  9.5

>5H4_MOUSE (P97288) 5-hydroxytryptamine 4 receptor (5-HT-4)
           (Serotonin receptor 4) (5-HT4)
          Length = 388

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 23/72 (31%), Positives = 33/72 (44%), Gaps = 8/72 (11%)

Query: 291 ICALMDCICFSY-DFKETHFVIWQMKEFGVEESWTQFLKISYQNLGINYIL-------GR 342
           +C +M C CF +  F  T+ V   +     E+ WT FL + Y N G+N  L        R
Sbjct: 261 LCVIMGCFCFCWAPFFVTNIVDPFIDYTVPEQVWTAFLWLGYINSGLNPFLYAFLNKSFR 320

Query: 343 NGFLVLPVCLSE 354
             FL++  C  E
Sbjct: 321 RAFLIILCCDDE 332


>5H4_RAT (Q62758) 5-hydroxytryptamine 4 receptor (5-HT-4) (Serotonin
           receptor 4) (5-HT4)
          Length = 406

 Score = 34.3 bits (77), Expect = 0.51
 Identities = 23/72 (31%), Positives = 33/72 (44%), Gaps = 8/72 (11%)

Query: 291 ICALMDCICFSY-DFKETHFVIWQMKEFGVEESWTQFLKISYQNLGINYIL-------GR 342
           +C +M C CF +  F  T+ V   +     E+ WT FL + Y N G+N  L        R
Sbjct: 261 LCVIMGCFCFCWAPFFVTNIVDPFIDYTVPEKVWTAFLWLGYINSGLNPFLYAFLNKSFR 320

Query: 343 NGFLVLPVCLSE 354
             FL++  C  E
Sbjct: 321 RAFLIILCCDDE 332


>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in
           chromosome III
          Length = 902

 Score = 30.0 bits (66), Expect = 9.5
 Identities = 16/46 (34%), Positives = 25/46 (53%), Gaps = 5/46 (10%)

Query: 101 IPIADDLQYQFSCVDCC---GIIGSCNGLICLHGCFHGSGYKKHSF 143
           +P +D    +  CV CC   G+IGS  G++ ++     SG K+ SF
Sbjct: 439 LPTSDGTSVRSVCVSCCGNFGLIGSSKGVVDVYNM--QSGIKRKSF 482


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.140    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,774,651
Number of Sequences: 164201
Number of extensions: 1772874
Number of successful extensions: 3181
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3179
Number of HSP's gapped (non-prelim): 4
length of query: 362
length of database: 59,974,054
effective HSP length: 111
effective length of query: 251
effective length of database: 41,747,743
effective search space: 10478683493
effective search space used: 10478683493
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)