BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136954.11 + phase: 0
(174 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
5HTA_DROME (P28285) 5-hydroxytryptamine receptor 2A (5-HT recept... 38 0.013
YMH1_CAEEL (P34468) Hypothetical protein F58A4.1 in chromosome III 35 0.087
STK3_MOUSE (Q9JI10) Serine/threonine-protein kinase 3 (EC 2.7.1.... 35 0.11
YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 34 0.19
TRPS_HUMAN (Q9UHF7) Zinc finger transcription factor Trps1 (Zinc... 34 0.19
PMA2_YEAST (P19657) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proto... 34 0.19
OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b... 34 0.19
DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC) 34 0.19
SCWB_YEAST (P53189) Probable family 17 glucosidase SCW11 precurs... 33 0.33
SAN1_YEAST (P22470) SAN1 protein 33 0.43
GAR2_SCHPO (P41891) Protein gar2 33 0.43
CNO3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3 (CC... 33 0.43
CNO3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CC... 33 0.43
TRPS_MOUSE (Q925H1) Zinc finger transcription factor Trps1 32 0.56
SSN6_YEAST (P14922) Glucose repression mediator protein 32 0.56
DJ20_CAEEL (Q8MPX3) DnaJ homolog dnj-20 precursor 32 0.56
A3B2_MOUSE (Q9JME5) Adapter-related protein complex 3 beta 2 sub... 32 0.56
P3K1_DICDI (P54673) Phosphatidylinositol 3-kinase 1 (EC 2.7.1.13... 32 0.73
CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14) 32 0.73
PLC1_CANAL (O13433) 1-phosphatidylinositol-4,5-bisphosphate phos... 32 0.96
>5HTA_DROME (P28285) 5-hydroxytryptamine receptor 2A (5-HT receptor)
(Serotonin receptor 2A)
Length = 834
Score = 37.7 bits (86), Expect = 0.013
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 56 KLSGYLEGNGESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTST 115
K S + G S R + G+R +Q+ EE + QD+ + +T+T
Sbjct: 538 KSSAAVNGMAPSGRQEDDGQRPEHGEQEDREE-----LEDQDE-------QVGPQPTTAT 585
Query: 116 SRSSSFGDNTSTCTC--------EHDKDQKSIENMNDEESTVKQGGGGGENHVRRTE--- 164
S +++ G N S C E + Q+ +E + + +VK GGGGG + T
Sbjct: 586 SATTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTITS 645
Query: 165 -SVETPTTDTS 174
S +P T TS
Sbjct: 646 ISALSPQTPTS 656
>YMH1_CAEEL (P34468) Hypothetical protein F58A4.1 in chromosome III
Length = 254
Score = 35.0 bits (79), Expect = 0.087
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 83 KPYEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCT 129
KPYEE I PT ++PS S+STSTSTS S+S +TST T
Sbjct: 82 KPYEETDTPI------PTH-SSPSTSTSTSTSTSTSTSTSRSTSTVT 121
>STK3_MOUSE (Q9JI10) Serine/threonine-protein kinase 3 (EC 2.7.1.37)
(STE20-like kinase MST2) (MST-2) (Mammalian STE20-like
protein kinase 2)
Length = 497
Score = 34.7 bits (78), Expect = 0.11
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 66 ESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNT 125
E +R+LE E N+D D+ + +V + + T AT +MS T +S+ ++
Sbjct: 304 EQQRELEEEEENSDEDE--LDSHTMVKTSSESVGTMRATSTMSEGAQTMIEHNSTMLESD 361
Query: 126 STCTCEHDKDQKSIENMNDEESTVKQ 151
+ ++++ E +E+ T+K+
Sbjct: 362 LGTMVINSEEEEEEEEEEEEDGTMKR 387
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor
Length = 374
Score = 33.9 bits (76), Expect = 0.19
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 10/121 (8%)
Query: 54 YWKLSGYLEGNGESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTST 113
YW + YL GNG + + + ++ T + + T S SSS+S+
Sbjct: 112 YWSV--YLTGNGVLQTTVSSSSVSSTTSSSS--------SSSPSSSSTTTTTSPSSSSSS 161
Query: 114 STSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTESVETPTTDT 173
S+S SSS ++S+ + S + + S+ + V T S + + +
Sbjct: 162 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSS 221
Query: 174 S 174
S
Sbjct: 222 S 222
>TRPS_HUMAN (Q9UHF7) Zinc finger transcription factor Trps1 (Zinc
finger protein GC79) (Tricho-rhino-phalangeal syndrome
type I protein)
Length = 1281
Score = 33.9 bits (76), Expect = 0.19
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 67 SERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATP--SMSSSTSTSTSRSSSFGDN 124
S + + A + ++ D +++KI V AG D P + P + SS T +S +
Sbjct: 379 SNKSIPALQSSDSGDLGKWQDKITV-KAGDDTPVGYSVPIKPLDSSRQNGTEATSYYWCK 437
Query: 125 TSTCTCEHDKDQKSIENMNDEESTVKQGG 153
+ +CE K +E+ + V+ GG
Sbjct: 438 FCSFSCESSSSLKLLEHYGKQHGAVQSGG 466
>PMA2_YEAST (P19657) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton
pump 2)
Length = 947
Score = 33.9 bits (76), Expect = 0.19
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 78 NDTDQKPYEEKI---LVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFG---DNTSTCTCE 131
+ T+ K Y+EK + + D P + S SSS+STSTS SSS + +
Sbjct: 2 SSTEAKQYKEKPSKEYLHASDGDDPANNSAASSSSSSSTSTSASSSAAAVPRKAAAASAA 61
Query: 132 HDKD-QKSIENMNDE-ESTVKQGGGGGENHVR 161
D D + I+ + DE +S +G GE VR
Sbjct: 62 DDSDSDEDIDQLIDELQSNYGEGDESGEEEVR 93
>OMB_DROME (Q24432) Optomotor-blind protein
(Lethal(1)optomotor-blind) (L(1)omb) (Bifid protein)
Length = 972
Score = 33.9 bits (76), Expect = 0.19
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 77 NNDTDQKPYEEKILVIMA---GQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHD 133
NN+T+ LV ++ G + + + S S++T+TS + +SS +N + T ++
Sbjct: 68 NNNTNSNTNNTNNLVAVSPTGGGAQLSPQSNHSSSNTTTTSNTNNSSSNNNNNNSTHNNN 127
Query: 134 KDQKSIENMNDEESTVKQGGGGGENHVRRTESVETP 169
+ + N N+ ++ KQG +H+ TE +P
Sbjct: 128 NNHTNNNNNNNNNTSQKQG-----HHLSTTEEPPSP 158
>DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC)
Length = 4725
Score = 33.9 bits (76), Expect = 0.19
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 86 EEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIE 140
+ KI V++ + PT + S+ TST+TS SSS DNT T + + K+ + E
Sbjct: 77 DSKIPVLLIQKTNPTI----NSSNQTSTTTSSSSSSDDNTLTSSQQQSKESFNFE 127
>SCWB_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor
(EC 3.2.1.-) (Soluble cell wall protein 11)
Length = 542
Score = 33.1 bits (74), Expect = 0.33
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 61 LEGNGESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSS-STSTSTSRSS 119
+EGN +S+ + +Q+ +A Q+ TP+ SS S+STS+S SS
Sbjct: 180 VEGNTQSQHHSYQAAATSTLNQQTSTS-----IASQESTESTNTPTSSSTSSSTSSSTSS 234
Query: 120 SFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S +TS+ T S + +E+ G + T S
Sbjct: 235 STSSSTSSSTSSSTSSSTSSSTSSTQETAATTSEGSSSSSAAITSS 280
>SAN1_YEAST (P22470) SAN1 protein
Length = 610
Score = 32.7 bits (73), Expect = 0.43
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 108 SSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENH 159
+ S+S+ T++ SSF +N S T + N N+ + ++GG GEN+
Sbjct: 492 NDSSSSDTTQGSSFLENISRLTGHFTNGSRDNNNDNNHSNDQQRGGSTGENN 543
>GAR2_SCHPO (P41891) Protein gar2
Length = 500
Score = 32.7 bits (73), Expect = 0.43
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 66 ESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNT 125
++E E+ ++ + + EE+ +V + + + + ++ SSS S S S SS +
Sbjct: 129 KTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEE 188
Query: 126 STCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTESVETPTTD 172
+K + S E+ +D ES+ G++ E+ + D
Sbjct: 189 EVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSED 235
>CNO3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3
(CCR4-associated factor 3)
Length = 751
Score = 32.7 bits (73), Expect = 0.43
Identities = 17/52 (32%), Positives = 25/52 (47%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGE 157
+ SSST TST+ SS + + CT E+ +D K D E + G +
Sbjct: 255 NQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSPAKNGSK 306
>CNO3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3
(CCR4-associated factor 3)
Length = 753
Score = 32.7 bits (73), Expect = 0.43
Identities = 17/52 (32%), Positives = 25/52 (47%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGE 157
+ SSST TST+ SS + + CT E+ +D K D E + G +
Sbjct: 255 NQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSPAKNGSK 306
>TRPS_MOUSE (Q925H1) Zinc finger transcription factor Trps1
Length = 1281
Score = 32.3 bits (72), Expect = 0.56
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 67 SERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATP--SMSSSTSTSTSRSSSFGDN 124
S + + A ++ D +++K + + AG D P + P + SS T +S +
Sbjct: 379 SNKSIPALRASDSGDVGKWQDK-MTVKAGDDTPVGYSVPIKPLDSSRQNGTEATSYYWCK 437
Query: 125 TSTCTCEHDKDQKSIENMNDEESTVKQGG 153
+ +CE K +E+ + V+ GG
Sbjct: 438 FCSFSCESSSSLKLLEHYGKQHGAVQSGG 466
>SSN6_YEAST (P14922) Glucose repression mediator protein
Length = 966
Score = 32.3 bits (72), Expect = 0.56
Identities = 30/124 (24%), Positives = 51/124 (40%), Gaps = 11/124 (8%)
Query: 62 EGNGESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATP--------SMSSST-- 111
E + +S +E+ N ++KP + + + G +P A+P S+S ST
Sbjct: 763 EVSNQSPAVVESNTNNTSQEEKPVKANSIPSVIGAQEPPQEASPAEEATKAASVSPSTKP 822
Query: 112 -STSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTESVETPT 170
+T SS +S + DQ + E + +TV E+ VR+ E T
Sbjct: 823 LNTEPESSSVQPTVSSESSTTKANDQSTAETIELSTATVPAEASPVEDEVRQHSKEENGT 882
Query: 171 TDTS 174
T+ S
Sbjct: 883 TEAS 886
>DJ20_CAEEL (Q8MPX3) DnaJ homolog dnj-20 precursor
Length = 249
Score = 32.3 bits (72), Expect = 0.56
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 118 SSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENH 159
+ F D +S DK+++++ + + EE K GGGGG H
Sbjct: 63 NEKFQDLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGH 104
>A3B2_MOUSE (Q9JME5) Adapter-related protein complex 3 beta 2
subunit (Beta3B-adaptin) (Adaptor protein complex AP-3
beta-2 subunit) (AP-3 complex beta-2 subunit) (Clathrin
assembly protein complex 3 beta-2 large chain)
Length = 1082
Score = 32.3 bits (72), Expect = 0.56
Identities = 30/126 (23%), Positives = 53/126 (41%), Gaps = 9/126 (7%)
Query: 40 LGLIAFALLILACSYWKLSGYLEGNGE-SERDLEAGERNNDTDQKPYEEKILVIMAGQDK 98
LG ++ L A Y +L + E + S R++E E ++++ +EK +K
Sbjct: 624 LGSLSHLLNAKATGYQELPDWPEEAPDPSVRNVEVPEWTKCSNREKRKEK--------EK 675
Query: 99 PTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGEN 158
P + + S T ++ S S ++ S + + S E+ N+EE K GG E
Sbjct: 676 PFYSDSEGESGPTESADSEPESESESESKSSSGSGSGESSSESDNEEEDEEKGGGSESEQ 735
Query: 159 HVRRTE 164
E
Sbjct: 736 SEEEDE 741
>P3K1_DICDI (P54673) Phosphatidylinositol 3-kinase 1 (EC 2.7.1.137)
(PI3-kinase) (PtdIns-3-kinase) (PI3K)
Length = 1570
Score = 32.0 bits (71), Expect = 0.73
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 79 DTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKS 138
DT++KP T T + +++T+TST+ + TS ++ Q
Sbjct: 287 DTEEKPATTTTTTTTTSTSISTSTPTTTTTTTTNTSTTNDITIKPKTSPTKNNEERSQSP 346
Query: 139 IENMND--EESTVKQGGGGGENHVRRTESVETPTTDTS 174
I EE K N ++T S TPT T+
Sbjct: 347 ITTPKQPVEEIVKKVSTPKSNNTSKKTSSDTTPTGKTT 384
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)
Length = 860
Score = 32.0 bits (71), Expect = 0.73
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 77 NNDTDQKPYEE--KILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDK 134
NN PY + K +++ D PT T + S+STST TS S S T T +
Sbjct: 321 NNKLGGLPYADIMKEVLLRCDPDPPTSTVTSTTSASTSTQTS-SQSTTMETKTLSASTTP 379
Query: 135 DQKSIENMNDEESTVKQGGGGGENHVRRTESVETPTTDT 173
S + + T G E R++ + T T
Sbjct: 380 SSPSTVSPSSTMQTTSTGSTSIETVTTRSQEPPSTTIST 418
>PLC1_CANAL (O13433) 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase 1 (EC 3.1.4.11) (Phosphoinositide
phospholipase C) (PLC-1) (Phospholipase C-1)
Length = 1099
Score = 31.6 bits (70), Expect = 0.96
Identities = 23/75 (30%), Positives = 36/75 (47%), Gaps = 7/75 (9%)
Query: 105 PSMSSSTSTSTSRSSSFGDNTSTCTCEHD-----KDQKSIENMNDEESTVKQGGGGGENH 159
PS +S S+S SSS NT + T ++ + KS +N+++ S V GG +
Sbjct: 84 PSPKQQSSLSSSSSSSSSSNTKSSTTKNIFKKLLRINKSSDNIDESRSIVSNNGGSPMSD 143
Query: 160 VRRTESVETPTTDTS 174
T T +TDT+
Sbjct: 144 --STTVTSTLSTDTA 156
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.308 0.126 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,158,973
Number of Sequences: 164201
Number of extensions: 856011
Number of successful extensions: 4043
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 3637
Number of HSP's gapped (non-prelim): 232
length of query: 174
length of database: 59,974,054
effective HSP length: 103
effective length of query: 71
effective length of database: 43,061,351
effective search space: 3057355921
effective search space used: 3057355921
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Medicago: description of AC136954.11