BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136841.8 + phase: 0 /pseudo
         (119 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YQ28_MYCBO (P65030) Hypothetical protein Mb2628                        28  2.8
YP97_MYCTU (P65029) Hypothetical protein Rv2597/MT2673                 28  2.8
GRSB_BACBR (P14688) Gramicidin S synthetase II [Includes: ATP-de...    28  2.8
YFE9_YEAST (P43554) Hypothetical 70.3 kDa protein in ALR2-EMP47 ...    28  3.7
MSRB_MYCPN (P75129) Peptide methionine sulfoxide reductase msrB ...    27  6.3
HEM3_CHLVI (P28464) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...    27  6.3
CHLI_GUITH (Q39516) Magnesium-chelatase subunit chlI (EC 6.6.1.1...    27  6.3
P2C4_SCHPO (O14156) Protein phosphatase 2C homolog 4 (EC 3.1.3.1...    27  8.2

>YQ28_MYCBO (P65030) Hypothetical protein Mb2628
          Length = 206

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 11/24 (45%), Positives = 15/24 (61%)

Query: 54  EIQLDDFDKWANDMGYSVAAGNEV 77
           E  L  F++WA DMG+ +A G  V
Sbjct: 168 ESMLLSFERWAPDMGWEIATGKSV 191


>YP97_MYCTU (P65029) Hypothetical protein Rv2597/MT2673
          Length = 206

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 11/24 (45%), Positives = 15/24 (61%)

Query: 54  EIQLDDFDKWANDMGYSVAAGNEV 77
           E  L  F++WA DMG+ +A G  V
Sbjct: 168 ESMLLSFERWAPDMGWEIATGKSV 191


>GRSB_BACBR (P14688) Gramicidin S synthetase II [Includes:
            ATP-dependent proline adenylase (ProA) (Proline
            activase); ATP-dependent valine adenylase (ValA) (Valine
            activase); ATP-dependent ornithine adenylase (OrnA)
            (Ornithine activase); ATP-dependent leu
          Length = 4451

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)

Query: 40   ITRMVAD---PEERAKIEIQLDDFDKWANDMGYSVAAGNEVPSVWWSPFGKGLPEL 92
            IT+ +AD    +E A++ IQ  DF  W N+   S A   +  + W + F + +P L
Sbjct: 2233 ITKEIADLYKGKELAELHIQYKDFAVWQNEWFQSDALEKQ-KTYWLNTFAEDIPVL 2287


>YFE9_YEAST (P43554) Hypothetical 70.3 kDa protein in ALR2-EMP47
           intergenic region
          Length = 623

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 11/79 (13%)

Query: 2   GRTLHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFD 61
           G+++ G L  +  F  P++HS + F+  ++           M A      + E  L  ++
Sbjct: 305 GQSISGTLELSAQFRVPRYHSKNSFQQALQ-----------MKAMDIPIGRHEELLAQYE 353

Query: 62  KWANDMGYSVAAGNEVPSV 80
             A D   S++  N +PSV
Sbjct: 354 SQAPDGSASISLPNHIPSV 372


>MSRB_MYCPN (P75129) Peptide methionine sulfoxide reductase msrB (EC
           1.8.4.6) (K05_orf151)
          Length = 151

 Score = 27.3 bits (59), Expect = 6.3
 Identities = 14/35 (40%), Positives = 15/35 (42%)

Query: 6   HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCI 40
           HG +       N   H  H FRD  E  GGL  CI
Sbjct: 88  HGMIRTEVRAKNSNSHLGHVFRDGPEEHGGLRYCI 122


>HEM3_CHLVI (P28464) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 311

 Score = 27.3 bits (59), Expect = 6.3
 Identities = 12/32 (37%), Positives = 19/32 (58%)

Query: 26  FRDDIEGKGGLHDCITRMVADPEERAKIEIQL 57
           F   ++GK GL + +T+ V  PEE   + I+L
Sbjct: 260 FVGSVDGKTGLRNEVTKAVKTPEEAEAVGIEL 291


>CHLI_GUITH (Q39516) Magnesium-chelatase subunit chlI (EC 6.6.1.1)
           (Mg-protoporphyrin IX chelatase)
          Length = 353

 Score = 27.3 bits (59), Expect = 6.3
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 10  HAAGYFLNPQFHSSHG-FRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDK 62
           H A + L    +   G  R  +  + G+H  I R V DPE R KI  Q  +FDK
Sbjct: 184 HPARFVLVGSGNPEEGELRPQLLDRFGMHSEI-RTVRDPELRVKIVEQRSEFDK 236


>P2C4_SCHPO (O14156) Protein phosphatase 2C homolog 4 (EC 3.1.3.16)
           (PP2C-4)
          Length = 383

 Score = 26.9 bits (58), Expect = 8.2
 Identities = 21/66 (31%), Positives = 27/66 (40%)

Query: 9   LHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWANDMG 68
           L   G    PQ  S H  RDD      L D IT +V+D E    I++     D   N + 
Sbjct: 279 LKKLGVVAEPQLTSIHSLRDDWSFLTLLSDGITDVVSDDEVVDIIKLSESPQDAANNIIR 338

Query: 69  YSVAAG 74
           Y+   G
Sbjct: 339 YAQNVG 344


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.333    0.149    0.525 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,090,354
Number of Sequences: 164201
Number of extensions: 658664
Number of successful extensions: 1680
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1674
Number of HSP's gapped (non-prelim): 9
length of query: 119
length of database: 59,974,054
effective HSP length: 95
effective length of query: 24
effective length of database: 44,374,959
effective search space: 1064999016
effective search space used: 1064999016
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)