BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136840.1 + phase: 0 /pseudo
         (1308 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310...   111  1e-23

>M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310
           (ORF154)
          Length = 154

 Score =  111 bits (278), Expect = 1e-23
 Identities = 52/125 (41%), Positives = 80/125 (63%), Gaps = 2/125 (1%)

Query: 816 CEHIESMISRFWWGSKQGERKIHWIR*DEVCKNKKV-GGMGFRTFKELNLAMLSKQGWRI 874
           C+ + S ++ FWW S + +RKI W+   ++CK+K+  GG+GFR     N A+L+KQ +RI
Sbjct: 18  CKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRI 77

Query: 875 LHNEELLLS*CLKGRYFPRGDFLKASVGFNPSYTWRSIMHAKFEVIDKVGVWRVGDGRNI 934
           +H    LLS  L+ RYFP    ++ SVG  PSY WRSI+H + E++ +  +  +GDG + 
Sbjct: 78  IHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGR-ELLSRGLLRTIGDGIHT 136

Query: 935 RVWKD 939
           +VW D
Sbjct: 137 KVWLD 141


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.358    0.160    0.572 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,062,193
Number of Sequences: 164201
Number of extensions: 4342921
Number of successful extensions: 15051
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15048
Number of HSP's gapped (non-prelim): 1
length of query: 1308
length of database: 59,974,054
effective HSP length: 122
effective length of query: 1186
effective length of database: 39,941,532
effective search space: 47370656952
effective search space used: 47370656952
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 72 (32.3 bits)