BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136507.9 + phase: 0 /pseudo
         (261 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

F16Q_BRANA (P46267) Fructose-1,6-bisphosphatase, cytosolic (EC 3...    32  1.2
F16Q_SOLTU (P46276) Fructose-1,6-bisphosphatase, cytosolic (EC 3...    32  1.5
TRUB_MYCGA (P59879) tRNA pseudouridine synthase B (EC 4.2.1.70) ...    31  2.6
RECR_MYCPU (Q98RF8) Recombination protein recR                         30  5.9

>F16Q_BRANA (P46267) Fructose-1,6-bisphosphatase, cytosolic (EC
           3.1.3.11) (D-fructose-1,6-bisphosphate
           1-phosphohydrolase) (FBPase)
          Length = 339

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 24/99 (24%), Positives = 42/99 (42%)

Query: 131 NNIFIGAFVQNLNTNSAFNAKLLGVITAINIAGENNWRNIWLETDLQLAVLAFKNLNMVP 190
           +NI +G        N A  AKL+G+    NI GE   +   L  D+ +  L       V 
Sbjct: 37  SNIVLGCKFVCSAVNKAGLAKLIGLAGDTNIQGEEQKKLDVLSNDVFVKALVSSGRTSVL 96

Query: 191 WSLRNKWLNYFEHVRSMNFLITHIYIEGNSCADCMANVG 229
            S  ++   + E  +   + +    ++G+S  DC  ++G
Sbjct: 97  VSEEDEEATFVESSKCGKYCVVFDPLDGSSNIDCGVSIG 135


>F16Q_SOLTU (P46276) Fructose-1,6-bisphosphatase, cytosolic (EC
           3.1.3.11) (D-fructose-1,6-bisphosphate
           1-phosphohydrolase) (FBPase) (CY-F1)
          Length = 340

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 25/115 (21%), Positives = 46/115 (39%), Gaps = 2/115 (1%)

Query: 115 TKNPTKASCGGVFRDHNNIFIGAFVQNLNTNSAFNAKLLGVITAINIAGENNWRNIWLET 174
           TK+P       +   H  I +G        N A  AKLLG+    N+ GE+  +   L  
Sbjct: 24  TKHPESRGDFSILLSH--IVLGCKFVCTAVNKAGLAKLLGLAGETNVQGEDQKKLDVLSN 81

Query: 175 DLQLAVLAFKNLNMVPWSLRNKWLNYFEHVRSMNFLITHIYIEGNSCADCMANVG 229
           ++ +  L   N   +  S  ++   +        + +    ++G+S  DC  ++G
Sbjct: 82  EVFIKALVSSNRTCILVSEEDEEATFVRPANRGKYCVVFDPLDGSSNIDCGVSIG 136


>TRUB_MYCGA (P59879) tRNA pseudouridine synthase B (EC 4.2.1.70)
           (tRNA pseudouridine 55 synthase) (Psi55 synthase)
           (Pseudouridylate synthase) (Uracil hydrolyase)
          Length = 218

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 2/98 (2%)

Query: 16  KVVVKAVIINILSAIWFIRNQARFKDKKNHWKSAIDNII--VAVSLTGNRTKLTSFVNMD 73
           K+V+     NI SA      + RF  KK      +D +   V V  T  RTK  S +N D
Sbjct: 10  KIVIIDKPKNISSAFCLNLFKKRFNIKKAGHNGTLDPLASGVLVVATNKRTKELSQLNQD 69

Query: 74  EFVFLKAFKINIHPPRAPLIKEVMWIPPIPPWIKVNTD 111
           +  +L   K N H      + +V+      P IK   D
Sbjct: 70  DKQYLVKLKFNTHTDSYDRLGKVIRTTNYVPEIKQLND 107


>RECR_MYCPU (Q98RF8) Recombination protein recR
          Length = 191

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 23/86 (26%), Positives = 46/86 (52%), Gaps = 9/86 (10%)

Query: 18  VVKAVIINILSAIWFIRNQARFKDKKNHWKSAIDNIIVAVSLTGNRTKLTSFVNMD-EFV 76
           ++K +I N+ +A     N+ ++KDK  H+ S  + II+A++ T      ++++ +  E V
Sbjct: 104 IIKNLIENVKNA-----NEPKWKDKLLHYASNFEEIIIALNPTIEGQITSNYIKVILEEV 158

Query: 77  FLKAFKINIHPPRAPLIKEVMWIPPI 102
            LK  K+       P+  ++ +I PI
Sbjct: 159 ALKVTKL---AQGLPINSQIDYIDPI 181


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.325    0.139    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,730,432
Number of Sequences: 164201
Number of extensions: 1264681
Number of successful extensions: 3264
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3261
Number of HSP's gapped (non-prelim): 5
length of query: 261
length of database: 59,974,054
effective HSP length: 108
effective length of query: 153
effective length of database: 42,240,346
effective search space: 6462772938
effective search space used: 6462772938
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)