BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136507.8 + phase: 0 
         (146 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MM19_HUMAN (Q99542) Matrix metalloproteinase-19 precursor (EC 3....    33  0.28
EPOR_RAT (Q07303) Erythropoietin receptor precursor (EPO-R)            30  1.4
CATV_GVXN (Q9PYY5) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cyst...    30  1.8
BOI2_YEAST (P39969) BOI2 protein (BEB1 protein)                        30  1.8
PSD1_RAT (O88761) 26S proteasome non-ATPase regulatory subunit 1...    29  3.1
PSD1_HUMAN (Q99460) 26S proteasome non-ATPase regulatory subunit...    29  3.1
EPOR_PIG (Q9MYZ9) Erythropoietin receptor precursor (EPO-R)            28  5.3
SYL_THEAC (Q9HK31) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...    28  6.9
NIA1_PHAVU (P39865) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR-1)     28  6.9
EPOR_HUMAN (P19235) Erythropoietin receptor precursor (EPO-R)          28  6.9
ENP1_YEAST (P38333) ENP1 protein                                       28  6.9
CPSB_MOUSE (O35218) Cleavage and polyadenylation specificity fac...    28  6.9
UVRC_CLOAB (Q97LP6) UvrABC system protein C (UvrC protein) (Exci...    28  9.1
RNR_MYCGE (P47350) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB p...    28  9.1
MM19_MOUSE (Q9JHI0) Matrix metalloproteinase-19 precursor (EC 3....    28  9.1
HSLU_HELPJ (Q9ZLW1) ATP-dependent hsl protease ATP-binding subun...    28  9.1
ERB1_YEAST (Q04660) Eukaryotic ribosome biogenesis protein 1           28  9.1
DUS_MYCLE (Q50049) Probable tRNA-dihydrouridine synthase (EC 1.-...    28  9.1

>MM19_HUMAN (Q99542) Matrix metalloproteinase-19 precursor (EC
           3.4.24.-) (MMP-19) (Matrix metalloproteinase RASI)
           (MMP-18)
          Length = 508

 Score = 32.7 bits (73), Expect = 0.28
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 64  FPKDLRPIPPHVRNPLKFKLNQKVDVFDNDGWW 96
           FPK L  + P++   L + LNQKV +F   G+W
Sbjct: 369 FPKKLNRVEPNLDAALYWPLNQKVFLFKGSGYW 401


>EPOR_RAT (Q07303) Erythropoietin receptor precursor (EPO-R)
          Length = 507

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 19/65 (29%), Positives = 30/65 (45%), Gaps = 1/65 (1%)

Query: 13  GDKVEVCSEDEGFVGSYFEATIVSCLE-SGKYVIRYKNLLKDDESELLMETLFPKDLRPI 71
           GD V+  + DEG   S   + + S     G     ++  + D  S+LL     P +L P 
Sbjct: 388 GDSVDPATMDEGSETSSCPSDLASKPRPEGTSPSSFEYTILDPSSKLLCPRALPPELPPT 447

Query: 72  PPHVR 76
           PPH++
Sbjct: 448 PPHLK 452


>CATV_GVXN (Q9PYY5) Viral cathepsin (EC 3.4.22.50) (V-cath)
          (Cysteine proteinase) (CP)
          Length = 346

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 15/56 (26%), Positives = 32/56 (56%), Gaps = 6/56 (10%)

Query: 42 KYVIRYKNLLKDDESELLMETLFPKDLRPIPPHVRNPLK----FKLNQKVDVFDND 93
          ++V++Y  + KDD+ +     +F ++L  I  + RN L+    F++N + D+  N+
Sbjct: 45 EFVVKYNKVYKDDQEKEARFEIFKQNLADI--NARNALEDSAMFEINSRADISSNE 98


>BOI2_YEAST (P39969) BOI2 protein (BEB1 protein)
          Length = 1040

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 14/56 (25%), Positives = 29/56 (51%)

Query: 5   EKRVDYKVGDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLM 60
           E  +D K GDK++V ++DE +   ++    +   E G Y + +   +  +++  LM
Sbjct: 59  EDELDMKPGDKIKVITDDEEYKDGWYFGRNLRTNEEGLYPVVFTQKITVEKAPTLM 114


>PSD1_RAT (O88761) 26S proteasome non-ATPase regulatory subunit 1
           (26S proteasome regulatory subunit RPN2) (26S proteasome
           regulatory subunit S1) (26S proteasome subunit p112)
          Length = 953

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 14  DKVEVCSEDEGFVGSYFEATIVSCL--------ESGKYVIRYKNLLKDDESELLMETLFP 65
           DK+EV  EDEGF    F A + S +        ES  Y +   +L   +++   +ET+  
Sbjct: 43  DKIEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIA 102

Query: 66  K 66
           K
Sbjct: 103 K 103


>PSD1_HUMAN (Q99460) 26S proteasome non-ATPase regulatory subunit 1
           (26S proteasome regulatory subunit RPN2) (26S proteasome
           regulatory subunit S1) (26S proteasome subunit p112)
          Length = 953

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 14  DKVEVCSEDEGFVGSYFEATIVSCL--------ESGKYVIRYKNLLKDDESELLMETLFP 65
           DK+EV  EDEGF    F A + S +        ES  Y +   +L   +++   +ET+  
Sbjct: 43  DKIEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIA 102

Query: 66  K 66
           K
Sbjct: 103 K 103


>EPOR_PIG (Q9MYZ9) Erythropoietin receptor precursor (EPO-R)
          Length = 509

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 18/76 (23%), Positives = 35/76 (45%), Gaps = 2/76 (2%)

Query: 2   RPPEKRVDYKVGDKVEVCSEDEGFVGSYFEATI-VSCLESGKYVIRYKNLLKDDESELLM 60
           RP  + +    GD +++ + DE    S+  + + +     G     ++  + D  S+LL 
Sbjct: 380 RPASEDLPQPGGD-LDMAAMDEASEASFCSSALALKPGPEGASAASFEYTILDPSSQLLR 438

Query: 61  ETLFPKDLRPIPPHVR 76
               P +L P PPH++
Sbjct: 439 PRALPAELPPTPPHLK 454


>SYL_THEAC (Q9HK31) Leucyl-tRNA synthetase (EC 6.1.1.4)
           (Leucine--tRNA ligase) (LeuRS)
          Length = 910

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 18/53 (33%), Positives = 25/53 (46%), Gaps = 3/53 (5%)

Query: 53  DDESELL--METLFPKDLRPIP-PHVRNPLKFKLNQKVDVFDNDGWWVGKIAS 102
           +DESE     E  +P D+R    PH+ N L F +     +F  + W  G I S
Sbjct: 550 EDESEAKRQFEYWYPVDIRLTAIPHISNHLSFYVLNHAAIFPKEKWPAGLIIS 602


>NIA1_PHAVU (P39865) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR-1)
          Length = 881

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 15  KVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLME 61
           K  VC   +G +G  FE       +SG ++ R K L K  ES  +++
Sbjct: 457 KTNVCKPKKGEIGIVFEHPTQPGNQSGGWMAREKQLEKSSESNPILK 503


>EPOR_HUMAN (P19235) Erythropoietin receptor precursor (EPO-R)
          Length = 508

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 13  GDKVEVCSEDEGFVGSYFEATIVSCLE-SGKYVIRYKNLLKDDESELLMETLFPKDLRPI 71
           G  V++ + DEG   S   + + S     G     ++  + D  S+LL       +L P 
Sbjct: 389 GGSVDIVAMDEGSEASSCSSALASKPSPEGASAASFEYTILDPSSQLLRPWTLCPELPPT 448

Query: 72  PPHVR 76
           PPH++
Sbjct: 449 PPHLK 453


>ENP1_YEAST (P38333) ENP1 protein
          Length = 483

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 46  RYKNLLKDDESELLMETLFPKDLRPIPPHVRNPL 79
           RYKN +  D+ + L+ET+  +  + I P +R  L
Sbjct: 427 RYKNDITQDQRDFLLETVRQRGHKDIGPEIRREL 460


>CPSB_MOUSE (O35218) Cleavage and polyadenylation specificity
           factor, 100 kDa subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 48  KNLLKDDESELLMETLFPKDLRPIPPH 74
           K+L  +DE EL  ET     L P+PPH
Sbjct: 680 KSLFGEDEKELGEETEIIPTLEPLPPH 706


>UVRC_CLOAB (Q97LP6) UvrABC system protein C (UvrC protein)
          (Excinuclease ABC subunit C)
          Length = 623

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 21/46 (45%), Positives = 24/46 (51%), Gaps = 1/46 (2%)

Query: 11 KVGDKVEVCSEDEGFV-GSYFEATIVSCLESGKYVIRYKNLLKDDE 55
          KV   V+  SE E  V  S  EA I+ C    KY  RY  LLKDD+
Sbjct: 53 KVKAMVKNISEFEYIVTDSEIEALILECNLIKKYKPRYNILLKDDK 98


>RNR_MYCGE (P47350) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB
           protein homolog)
          Length = 725

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 15/49 (30%), Positives = 25/49 (50%), Gaps = 2/49 (4%)

Query: 13  GDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLME 61
           GD VE C  D+   G  F+A +++ L+  +  I Y      D++E  +E
Sbjct: 119 GDLVEFCKLDKPQFGDKFDAAVITILKRAR--ILYAGNFLVDQNEFALE 165


>MM19_MOUSE (Q9JHI0) Matrix metalloproteinase-19 precursor (EC
           3.4.24.-) (MMP-19) (Matrix metalloproteinase RASI)
          Length = 527

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 64  FPKDLRPIPPHVRNPLKFKLNQKVDVFDNDGWW 96
           FP     + P++   L + +NQKV +F   G+W
Sbjct: 369 FPMKFNRVEPNLDAALYWPVNQKVFLFKGSGYW 401


>HSLU_HELPJ (Q9ZLW1) ATP-dependent hsl protease ATP-binding subunit
           hslU
          Length = 443

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 21/69 (30%), Positives = 32/69 (45%), Gaps = 3/69 (4%)

Query: 15  KVEVCSEDE-GFVGSYFEATIVSCLESGKYVIR--YKNLLKDDESELLMETLFPKDLRPI 71
           KVE     E GFVG   E+ +   + +   ++   +K  LKD   E ++E +  K L P+
Sbjct: 82  KVEASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKERLKDKIEEAVVEKIAKKLLPPL 141

Query: 72  PPHVRNPLK 80
           P  V    K
Sbjct: 142 PSGVSEEKK 150


>ERB1_YEAST (Q04660) Eukaryotic ribosome biogenesis protein 1
          Length = 807

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 48  KNLLKDDESELLMETLFPKDLRPIP 72
           KN L  D + L+ E   PKDLRP P
Sbjct: 402 KNKLNIDPNSLIPELPSPKDLRPFP 426


>DUS_MYCLE (Q50049) Probable tRNA-dihydrouridine synthase (EC
           1.-.-.-)
          Length = 384

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 14/43 (32%), Positives = 26/43 (59%), Gaps = 5/43 (11%)

Query: 68  LRPIPPHVRNPLKFKLNQKVDVFDNDGWWVGKIASEKILMEKS 110
           LRP PPH+R+PL     ++  V    G +V ++ + + L+E++
Sbjct: 28  LRPAPPHLRSPL-----EQSQVGTISGLYVCEMVTARALVERN 65


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.142    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,959,563
Number of Sequences: 164201
Number of extensions: 746343
Number of successful extensions: 1791
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1784
Number of HSP's gapped (non-prelim): 18
length of query: 146
length of database: 59,974,054
effective HSP length: 100
effective length of query: 46
effective length of database: 43,553,954
effective search space: 2003481884
effective search space used: 2003481884
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)