BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136506.11 - phase: 0 /pseudo
         (1043 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Y143_HUMAN (Q14156) Hypothetical protein KIAA0143 (Fragment)           67  2e-10
YQD3_CAEEL (Q09263) Hypothetical protein C32D5.3 in chromosome II      62  1e-08
YM62_YEAST (Q03653) Hypothetical 89.2 kDa protein in RAR1-SCJ1 i...    45  0.001
FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP synth...    33  4.0

>Y143_HUMAN (Q14156) Hypothetical protein KIAA0143 (Fragment)
          Length = 885

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 48/180 (26%), Positives = 89/180 (48%), Gaps = 11/180 (6%)

Query: 15  LCCFCPALRERSRHPIKRYKKLLADIFPRTPEEEPNDRKISKLCEYASKNPLRVPKITSY 74
           +CC C ALR R       YK+L+ +IFP  P++      + KL  YA   P ++ +I SY
Sbjct: 69  VCCCCSALRPR-------YKRLVDNIFPEDPKDGLVKTDMEKLTFYAVSAPEKLDRIGSY 121

Query: 75  LEQRCYKELRTENYQAVKVVICIYRKLLVSCRDQ-MPLFASSLLSIIQILLDQSRQDEVQ 133
           L +R  +++       V + +    +LL++C  Q +  F  S L ++  LL +S + ++Q
Sbjct: 122 LAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPFVESFLHMVAKLL-ESGEPKLQ 180

Query: 134 ILGCQTLFDFVNNQRD-GTYMFNLDSFILKLCHLAQQVGDDGKVE-HLRASGLQVLSSMV 191
           +LG  +   F N + D  +Y    D F+ +   +      D ++   +R +G++ +  +V
Sbjct: 181 VLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHSDPEIRTEIRIAGIRGIQGVV 240


>YQD3_CAEEL (Q09263) Hypothetical protein C32D5.3 in chromosome II
          Length = 859

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 21/187 (11%)

Query: 15  LCCFCPALRERSRHPIKRYKKLLADIFPRTPEEEPNDRKISKLCEYASKNPLRVPKITSY 74
           LCC  P           RY++L+  I+PR   +      + KL  YA  +P ++ +I  Y
Sbjct: 4   LCCCTPCK--------PRYRRLVDSIYPRAVTDGLLYSNMQKLTFYAISHPEKLERIGEY 55

Query: 75  LEQRCYKELRTENYQAVKVVICIYRKLLVSCRD--QMPLFASSLLSIIQILLDQSRQDEV 132
           L  R  ++L  +    VK+ +    +LL +C     +P F+ + L ++Q LL +S   ++
Sbjct: 56  LVMRMVRDLSRQRPVQVKIAVEAMDQLLQACHSSPSLPQFSENHLRMVQRLL-ESNNAKM 114

Query: 133 QILGCQTLFDFVNNQRDG-----TYMFNLDSFILKLCHLAQQV--GDDGKVEHLRASGLQ 185
           + L   +   F N +         Y F +D F  ++CH   Q   GDD ++   R +GL+
Sbjct: 115 EQLATDSFVTFSNIEESSPSYHRQYDFFIDKF-SQMCHANPQAAYGDDFRL--ARCAGLR 171

Query: 186 VLSSMVW 192
            L  +VW
Sbjct: 172 GLRGVVW 178


>YM62_YEAST (Q03653) Hypothetical 89.2 kDa protein in RAR1-SCJ1
           intergenic region
          Length = 782

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 27/127 (21%), Positives = 64/127 (50%), Gaps = 12/127 (9%)

Query: 32  RYKKLLADIFP--RTPEEEPNDRKISKLCEYASKNPLRVPKITSYLEQRCYKELRTENYQ 89
           +++KL+   +P  RT +++P   + S L  Y +    ++ K+++YL +R   +L      
Sbjct: 12  KHQKLVNQCYPTGRTTDKKPKSSETSYLLYYVNSRRSKLEKVSTYLIKRSTSDLNHRRIG 71

Query: 90  AVKVVICIYRKLLVSCRDQMPLFASSLLSII-QILLDQSRQDEVQILG---------CQT 139
            + V + +  K+++ C++ + +F    L I+ ++L + +  ++V ++          CQ 
Sbjct: 72  NIAVTLDLMNKIVLHCKENLNVFVKDFLYIMNKVLSNNNFNNDVSVVELIELAFSSICQN 131

Query: 140 LFDFVNN 146
           L D + N
Sbjct: 132 LDDVLCN 138


>FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP
           synthetase) (FPS) (Farnesyl diphosphate synthetase)
           [Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 353

 Score = 33.1 bits (74), Expect = 4.0
 Identities = 35/119 (29%), Positives = 50/119 (41%), Gaps = 21/119 (17%)

Query: 96  CIYRKLLVSCRDQMPLFASSLLSIIQILLDQSRQDEV-QILGCQT-------LFDFVNNQ 147
           CIYR L + CR+Q P +    L++I++ L  S Q E+ Q L   T       L  F   +
Sbjct: 138 CIYRLLKLYCREQ-PYY----LNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKR 192

Query: 148 RDG--TYMFNLDSFILKLCHLAQQVGDDGKVEHLRASGLQVLSSMVWFMGEFTHISVEF 204
                 Y     SF L +       G DG+ EH  A        ++  MGEF  I  ++
Sbjct: 193 YKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANA------KKILLEMGEFFQIQDDY 245


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.361    0.161    0.605 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,674,646
Number of Sequences: 164201
Number of extensions: 3785119
Number of successful extensions: 13403
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13395
Number of HSP's gapped (non-prelim): 5
length of query: 1043
length of database: 59,974,054
effective HSP length: 120
effective length of query: 923
effective length of database: 40,269,934
effective search space: 37169149082
effective search space used: 37169149082
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.9 bits)
S2: 71 (32.0 bits)