BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136504.6 - phase: 0 /pseudo
(417 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ITN2_HUMAN (Q9NZM3) Intersectin 2 (SH3 domain-containing protein... 35 0.36
RA50_PYRHO (O58687) DNA double-strand break repair rad50 ATPase 34 0.61
Y590_METJA (Q58010) Hypothetical protein MJ0590 33 1.4
RA50_METMP (P62134) DNA double-strand break repair rad50 ATPase 33 1.4
MUKB_VIBVY (Q7MJ64) Chromosome partition protein mukB (Structura... 32 2.3
CPXP_ECOLI (P32158) Periplasmic protein cpxP precursor 32 2.3
HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2... 32 3.0
ER53_HUMAN (P49257) ERGIC-53 protein precursor (ER-Golgi interme... 32 3.9
ER53_CERAE (Q9TU32) ERGIC-53 protein precursor (ER-Golgi interme... 32 3.9
PTR1_SCHPO (O13834) E3 ubiquitin protein ligase ptr1 (EC 6.3.2.-... 31 5.2
MUKB_PASMU (Q9CN36) Chromosome partition protein mukB (Structura... 31 5.2
KMHB_DICDI (P90648) Myosin heavy chain kinase B (EC 2.7.1.129) (... 31 5.2
ER53_MOUSE (Q9D0F3) ERGIC-53 protein precursor (ER-Golgi interme... 31 5.2
ERC1_RAT (Q811U3) ERC protein 1 (CAZ-associated structural prote... 31 6.7
VE1_HPV59 (Q81966) Replication protein E1 30 8.8
SYS_COXBU (P39919) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 30 8.8
STN2_MOUSE (P55821) Stathmin 2 (SCG10 protein) (Superior cervica... 30 8.8
STN2_HUMAN (Q93045) Stathmin 2 (SCG10 protein) (Superior cervica... 30 8.8
LYS2_CANGA (Q6FMI5) L-aminoadipate-semialdehyde dehydrogenase la... 30 8.8
ER53_RAT (Q62902) ERGIC-53 protein precursor (ER-Golgi intermedi... 30 8.8
>ITN2_HUMAN (Q9NZM3) Intersectin 2 (SH3 domain-containing protein
1B) (SH3P18) (SH3P18-like WASP associated protein)
Length = 1696
Score = 35.0 bits (79), Expect = 0.36
Identities = 25/93 (26%), Positives = 49/93 (51%), Gaps = 7/93 (7%)
Query: 196 LKKENEKLQLELHHSQANMDINQCEFIQR-LLDVTNFAAYSLPEKLSPEDNYQIVEYSNN 254
LKK+ +K +LE+ Q +++I + + +Q+ L + N Y +PEK + + +++SN
Sbjct: 513 LKKQTQKTELEVLDKQCDLEIMEIKQLQQELQEYQNKLIYLVPEKQLLNERIKNMQFSNT 572
Query: 255 SHSDANGSKGHSSNEKHHKKKPKFQKRIRCQLE 287
S G S K +K + +R++ QL+
Sbjct: 573 PDS------GVSLLHKKSLEKEELCQRLKEQLD 599
>RA50_PYRHO (O58687) DNA double-strand break repair rad50 ATPase
Length = 879
Score = 34.3 bits (77), Expect = 0.61
Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 39/175 (22%)
Query: 59 QLKISELKKYPET-----REPLEQLEDALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRK 113
+L I ELKK RE E+ + L R Y L S ++ A+ + +FRK
Sbjct: 428 RLAIIELKKARGKCPVCGRELTEEHKADLLRKYSLELSSIEKEIQEAKALERQLRAEFRK 487
Query: 114 AQNEIDRYLRLVPLITLVDNARATRVRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDK 173
+NE+ RL L T+ D + +RERL I ED K DK
Sbjct: 488 VENELS---RLSSLKTIAD--QIIEIRERLSKINL---------EDLK---------RDK 524
Query: 174 EDTVVLKKTLSCSYPNFSFTEALKKE--------NEKLQLELHHSQANMDINQCE 220
E+ +LK S S E+LKKE NE +LE+ +A ++++ E
Sbjct: 525 EEYELLK---SESNKLKGEVESLKKEVNELNDYKNESTKLEIEIDKAKKELSEIE 576
>Y590_METJA (Q58010) Hypothetical protein MJ0590
Length = 704
Score = 33.1 bits (74), Expect = 1.4
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 104 GWNIVYQFRKAQNEIDRYLRLVPLITLVDNARATRVRERLEVIEKDQCAYTLDDEDQKVQ 163
G +I+ Q N I L + PL+ + ++ + + ++ E D Y LDDED K+
Sbjct: 155 GVSIISQSGAVLNAI---LDIAPLLN-IGFSKVVSIGNKADIQESDLLEYFLDDEDTKIV 210
Query: 164 TVFMKPEHDKEDTVVLKK 181
++++ DK V KK
Sbjct: 211 VLYIEGLKDKRFLKVAKK 228
>RA50_METMP (P62134) DNA double-strand break repair rad50 ATPase
Length = 993
Score = 33.1 bits (74), Expect = 1.4
Identities = 29/86 (33%), Positives = 44/86 (50%), Gaps = 17/86 (19%)
Query: 9 GEIANVAQLTGLDAVKLIGMIV------KAANTARMHKKNCRQFAQHLKLIGNLLDQLKI 62
GEIAN+ Q+T D ++IG ++ KA+ + KK+ + LKL G
Sbjct: 134 GEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMNIVKKSYEETL--LKLEG-------- 183
Query: 63 SELKKYPETREPLEQLEDALRRSYIL 88
EL + PE E LE+L++ + S IL
Sbjct: 184 -ELTQEPEILENLEKLKNEVSESEIL 208
Score = 31.6 bits (70), Expect = 3.9
Identities = 35/181 (19%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 115 QNEIDRYLRLVP------LITLVDNARATRVRERLEVIEK--DQCAYTLDDE---DQKVQ 163
Q EI +++ P + L+ + + E++ +++K ++ L+ E + ++
Sbjct: 133 QGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMNIVKKSYEETLLKLEGELTQEPEIL 192
Query: 164 TVFMKPEHDKEDTVVLKKTLSCSYPNFSFTEALKKENEKLQLELHHSQAN-MDINQCEFI 222
K +++ ++ +LK+ + Y N + L+K +E LQ+E ++ N + N + I
Sbjct: 193 ENLEKLKNEVSESEILKEEILKKYENLEKLK-LEKNSEILQMEEKFAENNQLKENLKDII 251
Query: 223 QRLLDVTNFAAYSLPEKLSPEDNYQIVEYSNNSHSDANGSKGHSSNEKHHKKKPKFQKRI 282
+ ++ N +I + N+ + A SK S NE+++KK + + +I
Sbjct: 252 SEIKNI----------------NLEIQNFKNSLNLVAEESKNISENEENYKKYLELELKI 295
Query: 283 R 283
+
Sbjct: 296 K 296
>MUKB_VIBVY (Q7MJ64) Chromosome partition protein mukB (Structural
maintenance of chromosome related protein)
Length = 1487
Score = 32.3 bits (72), Expect = 2.3
Identities = 46/203 (22%), Positives = 90/203 (43%), Gaps = 14/203 (6%)
Query: 12 ANVAQLTGLDAVKLIGMIVKAANTARMHKKNCRQFAQHLKLIGNLLDQLKISELKKYPET 71
A VAQLT +A + ++ + M +QF LKL+ ++ Q++ +E +Y +
Sbjct: 442 ALVAQLTQSEAEQTQALLA-LKHKLDMSSAAAQQFENALKLVHSIAGQVERAEASRYAKA 500
Query: 72 REPLEQLEDALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVPLITLV 131
++ A ++ N Q R+ L N Q +AQ + Y + +TL
Sbjct: 501 -----AIQQARSAQQVVQNENQWRAQHRDLERSLN---QQNQAQALVAEYQK-AHQVTLD 551
Query: 132 DNARATRVRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDKEDTVVLKKTLSCSYPNFS 191
D + RER + D L +E++++++ + E D + + + ++ + +
Sbjct: 552 DEVMFEQERERHHA-QLDSLEIAL-EENRELRSEQRRQEQDLQSDITQLQAIAPKW--IA 607
Query: 192 FTEALKKENEKLQLELHHSQANM 214
+AL+K E+ EL SQ+ M
Sbjct: 608 ANDALEKLREQSGAELADSQSVM 630
>CPXP_ECOLI (P32158) Periplasmic protein cpxP precursor
Length = 166
Score = 32.3 bits (72), Expect = 2.3
Identities = 24/101 (23%), Positives = 46/101 (44%), Gaps = 6/101 (5%)
Query: 180 KKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRLLDVTNF---AAYSL 236
+ T S + S TE +++ L + H Q +++++ E + RL+ NF A +
Sbjct: 39 RSTQSHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQ 98
Query: 237 PEKLSPEDNYQIVEYS---NNSHSDANGSKGHSSNEKHHKK 274
EK++ E + VE + N + + NEKH ++
Sbjct: 99 AEKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQR 139
>HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2
(Cytadherence accessory protein 2)
Length = 1805
Score = 32.0 bits (71), Expect = 3.0
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 34 NTARMHKKNCRQFAQHLKLIGNLLDQLKISELKKYPETREPLEQLEDALRRSYILVNSCQ 93
N + H +N + L NLLDQ K + + + +E + Q L Y++ Q
Sbjct: 446 NEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQKQ 505
Query: 94 DRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARATRVRERLEVIEKDQCAY 153
D+ LL Q ++ Q + + L R +LE EKD
Sbjct: 506 DQKENELLF----FEKQLKQHQADFENELEAKQQELFEAKHALERSFIKLEDKEKD---- 557
Query: 154 TLDDEDQKVQTVFMKPEHDKEDTVVLKKTLSCSYPNFSFTEALKKENEKLQLELHHSQAN 213
L+ + Q++ F + + DK + + L Y N L++E +KL E + + N
Sbjct: 558 -LNTKAQQIANEFSQLKTDKSKSADFELMLQNEYEN------LQQEKQKLFQERTYFERN 610
>ER53_HUMAN (P49257) ERGIC-53 protein precursor (ER-Golgi
intermediate compartment 53 kDa protein) (Lectin,
mannose-binding 1) (Gp58) (Intracellular mannose
specific lectin MR60)
Length = 510
Score = 31.6 bits (70), Expect = 3.9
Identities = 23/87 (26%), Positives = 35/87 (39%)
Query: 170 EHDKEDTVVLKKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRLLDVT 229
+HD + + T P E +KE EK Q E H Q +D + EF + D+
Sbjct: 256 DHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQ 315
Query: 230 NFAAYSLPEKLSPEDNYQIVEYSNNSH 256
A + E + + Q+ E N H
Sbjct: 316 GQPAEEIFESVGDRELRQVFEGQNRIH 342
>ER53_CERAE (Q9TU32) ERGIC-53 protein precursor (ER-Golgi
intermediate compartment 53 kDa protein) (Lectin,
mannose-binding 1)
Length = 510
Score = 31.6 bits (70), Expect = 3.9
Identities = 23/87 (26%), Positives = 35/87 (39%)
Query: 170 EHDKEDTVVLKKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRLLDVT 229
+HD + + T P E +KE EK Q E H Q +D + EF + D+
Sbjct: 256 DHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQ 315
Query: 230 NFAAYSLPEKLSPEDNYQIVEYSNNSH 256
A + E + + Q+ E N H
Sbjct: 316 GQPAEEIFESVGDRELRQVFEGQNRIH 342
>PTR1_SCHPO (O13834) E3 ubiquitin protein ligase ptr1 (EC 6.3.2.-)
(Poly(A)+ RNA transport protein 1)
Length = 3227
Score = 31.2 bits (69), Expect = 5.2
Identities = 22/92 (23%), Positives = 42/92 (44%), Gaps = 3/92 (3%)
Query: 139 VRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDKEDTVVLKKTLSCSYPN--FSFTEAL 196
++E L+V+ D E+ M PE +K + + + L PN S E L
Sbjct: 1163 IKEPLDVVTDDNTNSNFSLEETNASVTDM-PESEKHENGIFQAYLLKEMPNDIVSQFEML 1221
Query: 197 KKENEKLQLELHHSQANMDINQCEFIQRLLDV 228
K + +L +++ + +++ N C+F+ DV
Sbjct: 1222 KSKQIELTVQMASYEGDLNQNLCDFLYTRDDV 1253
>MUKB_PASMU (Q9CN36) Chromosome partition protein mukB (Structural
maintenance of chromosome related protein)
Length = 1495
Score = 31.2 bits (69), Expect = 5.2
Identities = 34/170 (20%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 110 QFRKAQNEIDRYLRLVPLITLVDNA----RATRVRERLEVIEKD-----QCAYTLDDEDQ 160
Q A+ ++ +L+P + L+ + R RE+L++ E+D Q TL +
Sbjct: 891 QLDYAKEKMQLLNKLIPQLNLIADESLIDRVEECREQLDIAEQDELFIRQYGATLSQLEP 950
Query: 161 KVQTVFMKPEH------DKEDTVVLKKTLSCSY----------PNFSFTEALKKEN---- 200
T+ PEH D E + +K + +F++ E ++ EN
Sbjct: 951 IANTLQSDPEHYERLKADYEQAISQQKQVQQRLFALADVLQRKAHFAYEERVQTENTDLN 1010
Query: 201 EKLQLELHHSQANMDINQCEFIQRLLDVTNFAAYSLPEKLSPEDNYQIVE 250
E+L+ +L Q ++ + + Q+ TN+ + + S + Q+++
Sbjct: 1011 EQLRAKLDSLQQQREVQKAQLQQKQQQFTNYNRVYIELQTSFNNKMQMLQ 1060
>KMHB_DICDI (P90648) Myosin heavy chain kinase B (EC 2.7.1.129)
(MHCK B)
Length = 732
Score = 31.2 bits (69), Expect = 5.2
Identities = 19/58 (32%), Positives = 29/58 (49%), Gaps = 6/58 (10%)
Query: 146 IEKDQCAYTLDDEDQKVQTVFMKPEH------DKEDTVVLKKTLSCSYPNFSFTEALK 197
++K +C +TL+ D+ V TV + ++ DK V KTL C Y S A+K
Sbjct: 529 LKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVK 586
>ER53_MOUSE (Q9D0F3) ERGIC-53 protein precursor (ER-Golgi
intermediate compartment 53 kDa protein) (Lectin,
mannose-binding 1) (p58)
Length = 517
Score = 31.2 bits (69), Expect = 5.2
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 170 EHDKEDTVVLKKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRLLDVT 229
+HD + + T P + + +KE EK Q E H Q +D + EF + D+
Sbjct: 264 DHDVLSFLTFQLTEPGKEPPTAEKDISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQ 323
Query: 230 NFAAYSLPEKLSPEDNYQIVEYSNNSH 256
A + E + + Q+ E N H
Sbjct: 324 GQPADDIFESIGDRELRQVFEGQNRIH 350
>ERC1_RAT (Q811U3) ERC protein 1 (CAZ-associated structural protein
2) (CAST2)
Length = 948
Score = 30.8 bits (68), Expect = 6.7
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 113 KAQNEIDRYLRLVPLITLVDNARATRVRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHD 172
KAQ E+DR L ++ + N + ++ E LE + Q + D+++KV + K + +
Sbjct: 725 KAQTEVDRLLEILKEVENEKNDKDKKIAE-LESLTSRQ----VKDQNKKVANLKHKEQVE 779
Query: 173 KEDTVVL-------KKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRL 225
K+ + + + +LS S E L EK++ EL +A + Q ++
Sbjct: 780 KKKSAQMLEEARRREDSLSDSSQQLQ-VEELLMAMEKVKQELESMKAKLSSTQQSLAEKE 838
Query: 226 LDVTNFAA 233
+TN A
Sbjct: 839 THLTNLRA 846
>VE1_HPV59 (Q81966) Replication protein E1
Length = 644
Score = 30.4 bits (67), Expect = 8.8
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 149 DQCAYTLDDEDQKVQTVF--MKPEHDKEDTVVLKKTLSCSYPNFSFTEAL-KKENEKLQL 205
D + E + Q +F + + D + VLK+ CS N S A KK LQ
Sbjct: 53 DTTTICVQAERETAQALFNVQEAQRDAREMHVLKRKFGCSIENSSEKAAAGKKAKSPLQ- 111
Query: 206 ELHHSQANMDINQCEFIQRLLDVTNFA-AYSLPEKLSPEDNYQIVEYSNNSHSDANGS 262
+ ++++N + +RL+ V + YS E L + V N + D+NGS
Sbjct: 112 -----EISVNVNHPKVKRRLITVPDSGYGYSEVEMLETQ-----VTVENTGNGDSNGS 159
>SYS_COXBU (P39919) Seryl-tRNA synthetase (EC 6.1.1.11)
(Serine--tRNA ligase) (SerRS)
Length = 423
Score = 30.4 bits (67), Expect = 8.8
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 179 LKKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRLLDVTNFAAYSLPE 238
L KT+ + E L E +L EL +AN + Q F L + N S+P+
Sbjct: 54 LSKTIGMAKSKGENPELLMAEVSQLNDELKQEEANFETIQKAFSDFQLAIPNLPHDSVPD 113
Query: 239 KLSPEDNYQIVEY 251
S DN +I ++
Sbjct: 114 GKSENDNREIRQW 126
>STN2_MOUSE (P55821) Stathmin 2 (SCG10 protein) (Superior cervical
ganglion-10 protein)
Length = 179
Score = 30.4 bits (67), Expect = 8.8
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 139 VRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDKEDTVVLKKTLSCSYPNFSFTEALKK 198
++++LE E+ + + E Q ++ + K EH++E VL+K L NFS K
Sbjct: 84 IQKKLEAAEERRKS----QEAQVLKQLAEKREHERE---VLQKALE-ENNNFS-----KM 130
Query: 199 ENEKLQLELHHSQANMDINQCEFIQRLLDVTNFAA 233
EKL L++ + N + N I+RL + AA
Sbjct: 131 AEEKLILKMEQIKENREANLAAIIERLQEKERHAA 165
>STN2_HUMAN (Q93045) Stathmin 2 (SCG10 protein) (Superior cervical
ganglion-10 protein)
Length = 179
Score = 30.4 bits (67), Expect = 8.8
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 139 VRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDKEDTVVLKKTLSCSYPNFSFTEALKK 198
++++LE E+ + + E Q ++ + K EH++E VL+K L NFS K
Sbjct: 84 IQKKLEAAEERRKS----QEAQVLKQLAEKREHERE---VLQKALE-ENNNFS-----KM 130
Query: 199 ENEKLQLELHHSQANMDINQCEFIQRLLDVTNFAA 233
EKL L++ + N + N I+RL + AA
Sbjct: 131 AEEKLILKMEQIKENREANLAAIIERLQEKERHAA 165
>LYS2_CANGA (Q6FMI5) L-aminoadipate-semialdehyde dehydrogenase large
subunit (EC 1.2.1.31) (Alpha-aminoadipate reductase)
(Alpha-AR)
Length = 1374
Score = 30.4 bits (67), Expect = 8.8
Identities = 17/46 (36%), Positives = 27/46 (57%), Gaps = 3/46 (6%)
Query: 204 QLELHHSQANMDINQCEFIQRLLDVTNFAAYSLPEK---LSPEDNY 246
QLEL +++DIN EF Q+ ++ + LP K +SPED++
Sbjct: 813 QLELVAKNSSIDINDSEFNQQEREIRDLWLECLPTKPTSISPEDSF 858
>ER53_RAT (Q62902) ERGIC-53 protein precursor (ER-Golgi intermediate
compartment 53 kDa protein) (Lectin, mannose-binding 1)
(p58)
Length = 517
Score = 30.4 bits (67), Expect = 8.8
Identities = 22/87 (25%), Positives = 35/87 (39%)
Query: 170 EHDKEDTVVLKKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRLLDVT 229
+HD + + T P + +KE EK Q E H Q +D + EF + D+
Sbjct: 264 DHDVLSFLTFQLTEPGKEPPTPEKDISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQ 323
Query: 230 NFAAYSLPEKLSPEDNYQIVEYSNNSH 256
A + E + + Q+ E N H
Sbjct: 324 GQPADDIFESIGDRELRQVFEGQNRIH 350
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.325 0.139 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,724,072
Number of Sequences: 164201
Number of extensions: 1870229
Number of successful extensions: 6825
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6811
Number of HSP's gapped (non-prelim): 28
length of query: 417
length of database: 59,974,054
effective HSP length: 113
effective length of query: 304
effective length of database: 41,419,341
effective search space: 12591479664
effective search space used: 12591479664
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC136504.6