
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136502.1 + phase: 0
(64 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSHR_RAT (P70619) Glutathione reductase (EC 1.8.1.7) (GR) (GRase... 27 9.9
GSHR_MOUSE (P47791) Glutathione reductase, mitochondrial precurs... 27 9.9
>GSHR_RAT (P70619) Glutathione reductase (EC 1.8.1.7) (GR) (GRase)
(Fragment)
Length = 424
Score = 26.9 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 18/31 (57%), Gaps = 5/31 (16%)
Query: 36 NYGYPPVKFYYNT-----YVPENVDYGFNHC 61
N G P K +NT ++ ++VDYGF +C
Sbjct: 2 NVGCVPKKVMWNTAVHSEFIHDHVDYGFQNC 32
>GSHR_MOUSE (P47791) Glutathione reductase, mitochondrial precursor
(EC 1.8.1.7) (GR) (GRase)
Length = 500
Score = 26.9 bits (58), Expect = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 33 TAYNYGYPPVKFYYNT-----YVPENVDYGFNHC 61
T N G P K +NT ++ ++VDYGF C
Sbjct: 79 TCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSC 112
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.144 0.490
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,453,247
Number of Sequences: 164201
Number of extensions: 342153
Number of successful extensions: 619
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 619
Number of HSP's gapped (non-prelim): 2
length of query: 64
length of database: 59,974,054
effective HSP length: 40
effective length of query: 24
effective length of database: 53,406,014
effective search space: 1281744336
effective search space used: 1281744336
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC136502.1