Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136502.1 + phase: 0 
         (64 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GSHR_RAT (P70619) Glutathione reductase (EC 1.8.1.7) (GR) (GRase...    27  9.9
GSHR_MOUSE (P47791) Glutathione reductase, mitochondrial precurs...    27  9.9

>GSHR_RAT (P70619) Glutathione reductase (EC 1.8.1.7) (GR) (GRase)
          (Fragment)
          Length = 424

 Score = 26.9 bits (58), Expect = 9.9
 Identities = 12/31 (38%), Positives = 18/31 (57%), Gaps = 5/31 (16%)

Query: 36 NYGYPPVKFYYNT-----YVPENVDYGFNHC 61
          N G  P K  +NT     ++ ++VDYGF +C
Sbjct: 2  NVGCVPKKVMWNTAVHSEFIHDHVDYGFQNC 32


>GSHR_MOUSE (P47791) Glutathione reductase, mitochondrial precursor
           (EC 1.8.1.7) (GR) (GRase)
          Length = 500

 Score = 26.9 bits (58), Expect = 9.9
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 5/34 (14%)

Query: 33  TAYNYGYPPVKFYYNT-----YVPENVDYGFNHC 61
           T  N G  P K  +NT     ++ ++VDYGF  C
Sbjct: 79  TCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSC 112


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.323    0.144    0.490 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,453,247
Number of Sequences: 164201
Number of extensions: 342153
Number of successful extensions: 619
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 619
Number of HSP's gapped (non-prelim): 2
length of query: 64
length of database: 59,974,054
effective HSP length: 40
effective length of query: 24
effective length of database: 53,406,014
effective search space: 1281744336
effective search space used: 1281744336
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)


Medicago: description of AC136502.1