BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136451.5 + phase: 0
(161 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UBCY_ARATH (P42743) Ubiquitin-conjugating enzyme E2-18 kDa (EC 6... 306 2e-83
UBCB_XENLA (P56616) Ubiquitin-conjugating enzyme X (EC 6.3.2.19)... 87 1e-17
UB5A_MOUSE (P61080) Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2... 87 2e-17
UB5A_HUMAN (P51668) Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2... 87 2e-17
UBC4_CANAL (P43102) Ubiquitin-conjugating enzyme E2 4 (EC 6.3.2.... 86 5e-17
UBC2_DROME (P52485) Ubiquitin-conjugating enzyme E2-24 kDa (EC 6... 85 6e-17
UB6C_MOUSE (P52483) Ubiquitin-conjugating enzyme E2 E3 (EC 6.3.2... 85 6e-17
UB6C_HUMAN (Q969T4) Ubiquitin-conjugating enzyme E2 E3 (EC 6.3.2... 85 6e-17
UBCC_HUMAN (O00762) Ubiquitin-conjugating enzyme E2 C (EC 6.3.2.... 85 8e-17
UBC6_DROME (P25153) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6... 85 8e-17
UB6B_MOUSE (Q91W82) Ubiquitin-conjugating enzyme E2 E2 (EC 6.3.2... 85 8e-17
UB6B_HUMAN (Q96LR5) Ubiquitin-conjugating enzyme E2 E2 (EC 6.3.2... 85 8e-17
UBCC_MOUSE (Q9D1C1) Ubiquitin-conjugating enzyme E2 C (EC 6.3.2.... 84 1e-16
UBC9_ARATH (P35132) Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC... 84 1e-16
UBC8_ARATH (P35131) Ubiquitin-conjugating enzyme E2-17 kDa 8 (EC... 84 2e-16
UBC2_RAT (P63149) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19... 84 2e-16
UBC2_RABIT (P63148) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.... 84 2e-16
UBC2_MOUSE (P63147) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.... 84 2e-16
UBC2_HUMAN (P63146) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.... 84 2e-16
UBCB_ARATH (P35134) Ubiquitin-conjugating enzyme E2-17 kDa 11 (E... 83 2e-16
>UBCY_ARATH (P42743) Ubiquitin-conjugating enzyme E2-18 kDa (EC
6.3.2.19) (Ubiquitin-conjugating enzyme 15)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(PM42)
Length = 161
Score = 306 bits (783), Expect = 2e-83
Identities = 139/161 (86%), Positives = 152/161 (94%)
Query: 1 MTSSSAASRKTLSKIACNRLQKELVEWQVNPPTGFKHRVTDNLQRWVIEVGGAPGTLYSN 60
MTSSSA SRK LSKIACNRLQKEL EWQ+NPPTGF+H+VTDNLQ+W I+V GAPGTLY+N
Sbjct: 1 MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60
Query: 61 ETYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
ETYQLQV+FPE+YPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61 ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120
Query: 121 LSMLSSSTAKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
LSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161
>UBCB_XENLA (P56616) Ubiquitin-conjugating enzyme X (EC 6.3.2.19)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
Length = 179
Score = 87.4 bits (215), Expect = 1e-17
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 3 SSSAASRKTLSKIACNRLQKELVEWQVNPPTGFK-HRVTDNLQRWVIEVGGAPGTLYSNE 61
S ++A+R ++ K RLQ+EL+ ++ G +DNL +W+ + GA GT+Y +
Sbjct: 22 SGTSAARGSVGK----RLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDL 77
Query: 62 TYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISIL 121
Y+L ++FP YP AP V F+ P HP++ S+G+ICLDIL D WS V +I +S+
Sbjct: 78 RYKLSLEFPSGYPYNAPTVKFVTPC-FHPNVDSHGNICLDILKDKWSALYDVRTILLSLQ 136
Query: 122 SML 124
S+L
Sbjct: 137 SLL 139
>UB5A_MOUSE (P61080) Ubiquitin-conjugating enzyme E2 D1 (EC
6.3.2.19) (Ubiquitin-protein ligase D1) (Ubiquitin
carrier protein D1) (Ubiquitin-conjugating enzyme E2-17
kDa 1) (E2(17)KB 1)
Length = 147
Score = 86.7 bits (213), Expect = 2e-17
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 15 IACNRLQKELVEWQVNPPTGFKHR-VTDNLQRWVIEVGGAPGTLYSNETYQLQVDFPENY 73
+A R+QKEL + Q +PP V D+L W + G P + Y + L V FP +Y
Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 60
Query: 74 PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
P + P++ F HP+I SNG ICLDIL WSPA+TVS + +SI S+L
Sbjct: 61 PFKPPKIAFTTKI-YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
>UB5A_HUMAN (P51668) Ubiquitin-conjugating enzyme E2 D1 (EC
6.3.2.19) (Ubiquitin-protein ligase D1) (Ubiquitin
carrier protein D1) (UbcH5) (Ubiquitin-conjugating
enzyme E2-17 kDa 1) (E2(17)KB 1)
Length = 147
Score = 86.7 bits (213), Expect = 2e-17
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 15 IACNRLQKELVEWQVNPPTGFKHR-VTDNLQRWVIEVGGAPGTLYSNETYQLQVDFPENY 73
+A R+QKEL + Q +PP V D+L W + G P + Y + L V FP +Y
Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 60
Query: 74 PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
P + P++ F HP+I SNG ICLDIL WSPA+TVS + +SI S+L
Sbjct: 61 PFKPPKIAFTTKI-YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
>UBC4_CANAL (P43102) Ubiquitin-conjugating enzyme E2 4 (EC 6.3.2.19)
(Ubiquitin-protein ligase 4) (Ubiquitin carrier protein
4)
Length = 147
Score = 85.5 bits (210), Expect = 5e-17
Identities = 43/114 (37%), Positives = 69/114 (59%), Gaps = 2/114 (1%)
Query: 15 IACNRLQKELVEWQVNPPTGFKHR-VTDNLQRWVIEVGGAPGTLYSNETYQLQVDFPENY 73
++ R+ KEL + +PP+ V D+L W + G P + Y+ + L + FP +Y
Sbjct: 1 MSLKRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDY 60
Query: 74 PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSS 127
P++ P++ L HP+I SNG+ICLDIL D WSPA+T+S + +SI S+L+ +
Sbjct: 61 PLKPPKIA-LTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDA 113
>UBC2_DROME (P52485) Ubiquitin-conjugating enzyme E2-24 kDa (EC
6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier
protein)
Length = 232
Score = 85.1 bits (209), Expect = 6e-17
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 16 ACNRLQKELVEWQVNPPTGFKHRVT-DNLQRWVIEVGGAPGTLYSNETYQLQVDFPENYP 74
+ R+QKEL E ++PP DNL WV + G PG++Y + L + F YP
Sbjct: 87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYP 146
Query: 75 MEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
+ P+V F H +I S G ICLDIL D+WSPA+T+S + +SI S+L+
Sbjct: 147 FKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLT 196
>UB6C_MOUSE (P52483) Ubiquitin-conjugating enzyme E2 E3 (EC
6.3.2.19) (Ubiquitin-protein ligase E3) (Ubiquitin
carrier protein E3) (Ubiquitin-conjugating enzyme E2-23
kDa) (UbcM2)
Length = 207
Score = 85.1 bits (209), Expect = 6e-17
Identities = 47/121 (38%), Positives = 71/121 (57%), Gaps = 4/121 (3%)
Query: 8 SRKTLSKIACN--RLQKELVEWQVNPPTGFKHRVT-DNLQRWVIEVGGAPGTLYSNETYQ 64
S KT +K++ + R+QKEL E ++PP DN+ W + G PG++Y +
Sbjct: 52 SSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFF 111
Query: 65 LQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
L + F +YP + P+V F H +I S G ICLDIL D+WSPA+T+S + +SI S+L
Sbjct: 112 LDITFSSDYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLL 170
Query: 125 S 125
+
Sbjct: 171 T 171
>UB6C_HUMAN (Q969T4) Ubiquitin-conjugating enzyme E2 E3 (EC
6.3.2.19) (Ubiquitin-protein ligase E3) (Ubiquitin
carrier protein E3) (Ubiquitin-conjugating enzyme E2-23
kDa) (UbcH9)
Length = 207
Score = 85.1 bits (209), Expect = 6e-17
Identities = 47/121 (38%), Positives = 71/121 (57%), Gaps = 4/121 (3%)
Query: 8 SRKTLSKIACN--RLQKELVEWQVNPPTGFKHRVT-DNLQRWVIEVGGAPGTLYSNETYQ 64
S KT +K++ + R+QKEL E ++PP DN+ W + G PG++Y +
Sbjct: 52 SSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFF 111
Query: 65 LQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
L + F +YP + P+V F H +I S G ICLDIL D+WSPA+T+S + +SI S+L
Sbjct: 112 LDITFSSDYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLL 170
Query: 125 S 125
+
Sbjct: 171 T 171
>UBCC_HUMAN (O00762) Ubiquitin-conjugating enzyme E2 C (EC 6.3.2.19)
(Ubiquitin-protein ligase C) (Ubiquitin carrier protein
C) (UbcH10)
Length = 179
Score = 84.7 bits (208), Expect = 8e-17
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 4 SSAASRKTLSKIACNRLQKELVEWQVNPPTGFK-HRVTDNLQRWVIEVGGAPGTLYSNET 62
S A+R + K RLQ+EL+ ++ G +DNL +WV + GA GT+Y +
Sbjct: 23 SGGAARGPVGK----RLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLR 78
Query: 63 YQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILS 122
Y+L ++FP YP AP V FL P HP++ + G+ICLDIL + WS V +I +SI S
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC-YHPNVDTQGNICLDILKEKWSALYDVRTILLSIQS 137
Query: 123 ML 124
+L
Sbjct: 138 LL 139
>UBC6_DROME (P25153) Ubiquitin-conjugating enzyme E2-17 kDa (EC
6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier
protein)
Length = 151
Score = 84.7 bits (208), Expect = 8e-17
Identities = 51/136 (37%), Positives = 75/136 (54%), Gaps = 10/136 (7%)
Query: 12 LSKIACNRLQKELVEWQVNPPTGFKHRVTDN-LQRWVIEVGGAPGTLYSNETYQLQVDFP 70
+S A RL ++ Q +PPTG TDN + W + G T + + T++L ++F
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60
Query: 71 ENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS----- 125
E YP + P V F+ HP++Y++G ICLDIL + WSP VS+I SI S+LS
Sbjct: 61 EEYPNKPPTVRFVSKV-FHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPN 119
Query: 126 ---SSTAKQRPEDNDR 138
+STA Q ++N R
Sbjct: 120 SPANSTAAQLYKENRR 135
>UB6B_MOUSE (Q91W82) Ubiquitin-conjugating enzyme E2 E2 (EC
6.3.2.19) (Ubiquitin-protein ligase E2) (Ubiquitin
carrier protein E2)
Length = 201
Score = 84.7 bits (208), Expect = 8e-17
Identities = 47/121 (38%), Positives = 71/121 (57%), Gaps = 4/121 (3%)
Query: 8 SRKTLSKIACN--RLQKELVEWQVNPPTGFKHRVT-DNLQRWVIEVGGAPGTLYSNETYQ 64
S KT +K++ + R+QKEL E ++PP DN+ W + G PG++Y +
Sbjct: 46 SSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFF 105
Query: 65 LQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
L + F +YP + P+V F H +I S G ICLDIL D+WSPA+T+S + +SI S+L
Sbjct: 106 LDITFSPDYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLL 164
Query: 125 S 125
+
Sbjct: 165 T 165
>UB6B_HUMAN (Q96LR5) Ubiquitin-conjugating enzyme E2 E2 (EC
6.3.2.19) (Ubiquitin-protein ligase E2) (Ubiquitin
carrier protein E2) (UbcH8)
Length = 201
Score = 84.7 bits (208), Expect = 8e-17
Identities = 47/121 (38%), Positives = 71/121 (57%), Gaps = 4/121 (3%)
Query: 8 SRKTLSKIACN--RLQKELVEWQVNPPTGFKHRVT-DNLQRWVIEVGGAPGTLYSNETYQ 64
S KT +K++ + R+QKEL E ++PP DN+ W + G PG++Y +
Sbjct: 46 SSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFF 105
Query: 65 LQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
L + F +YP + P+V F H +I S G ICLDIL D+WSPA+T+S + +SI S+L
Sbjct: 106 LDITFSPDYPFKPPKVTF-RTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLL 164
Query: 125 S 125
+
Sbjct: 165 T 165
>UBCC_MOUSE (Q9D1C1) Ubiquitin-conjugating enzyme E2 C (EC 6.3.2.19)
(Ubiquitin-protein ligase C) (Ubiquitin carrier protein
C) (UbcH10)
Length = 179
Score = 84.3 bits (207), Expect = 1e-16
Identities = 46/107 (42%), Positives = 64/107 (58%), Gaps = 2/107 (1%)
Query: 19 RLQKELVEWQVNPPTGFK-HRVTDNLQRWVIEVGGAPGTLYSNETYQLQVDFPENYPMEA 77
RLQ+EL+ + G +DNL +WV + GA GT+Y + Y+L ++FP YP A
Sbjct: 34 RLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNA 93
Query: 78 PQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
P V FL P HP++ + G+ICLDIL D WS V +I +SI S+L
Sbjct: 94 PTVKFLTPC-YHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLL 139
>UBC9_ARATH (P35132) Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC
6.3.2.19) (Ubiquitin-protein ligase 9) (Ubiquitin
carrier protein 9) (UBCAT4B)
Length = 148
Score = 84.0 bits (206), Expect = 1e-16
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELVEWQVNPPTGFKHR-VTDNLQRWVIEVGGAPGTLYSNETYQLQVDFPENY 73
+A R+ KEL + Q +PPT V +++ W + G + YS + + + FP +Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
P + P+V F HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+
Sbjct: 61 PFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
>UBC8_ARATH (P35131) Ubiquitin-conjugating enzyme E2-17 kDa 8 (EC
6.3.2.19) (Ubiquitin-protein ligase 8) (Ubiquitin
carrier protein 8) (UBCAT4A)
Length = 148
Score = 83.6 bits (205), Expect = 2e-16
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELVEWQVNPPTGFKHR-VTDNLQRWVIEVGGAPGTLYSNETYQLQVDFPENY 73
+A R+ KEL + Q +PPT V +++ W + G + YS + + + FP +Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
P + P+V F HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+
Sbjct: 61 PFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
>UBC2_RAT (P63149) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19)
(Ubiquitin-protein ligase B) (Ubiquitin carrier protein
B) (HR6B) (E2(14k))
Length = 152
Score = 83.6 bits (205), Expect = 2e-16
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 10/136 (7%)
Query: 12 LSKIACNRLQKELVEWQVNPPTGFKHRVTDN-LQRWVIEVGGAPGTLYSNETYQLQVDFP 70
+S A RL ++ Q +PP G ++N + +W + G GT + + T++L ++F
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 71 ENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML------ 124
E YP + P V FL HP++Y++G ICLDIL + WSP VSSI SI S+L
Sbjct: 61 EEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 125 --SSSTAKQRPEDNDR 138
++S A Q ++N R
Sbjct: 120 SPANSQAAQLYQENKR 135
>UBC2_RABIT (P63148) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19)
(Ubiquitin-protein ligase B) (Ubiquitin carrier protein
B) (HR6B) (E2(14k))
Length = 152
Score = 83.6 bits (205), Expect = 2e-16
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 10/136 (7%)
Query: 12 LSKIACNRLQKELVEWQVNPPTGFKHRVTDN-LQRWVIEVGGAPGTLYSNETYQLQVDFP 70
+S A RL ++ Q +PP G ++N + +W + G GT + + T++L ++F
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 71 ENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML------ 124
E YP + P V FL HP++Y++G ICLDIL + WSP VSSI SI S+L
Sbjct: 61 EEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 125 --SSSTAKQRPEDNDR 138
++S A Q ++N R
Sbjct: 120 SPANSQAAQLYQENKR 135
>UBC2_MOUSE (P63147) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19)
(Ubiquitin-protein ligase B) (Ubiquitin carrier protein
B) (HR6B) (E214K)
Length = 152
Score = 83.6 bits (205), Expect = 2e-16
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 10/136 (7%)
Query: 12 LSKIACNRLQKELVEWQVNPPTGFKHRVTDN-LQRWVIEVGGAPGTLYSNETYQLQVDFP 70
+S A RL ++ Q +PP G ++N + +W + G GT + + T++L ++F
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 71 ENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML------ 124
E YP + P V FL HP++Y++G ICLDIL + WSP VSSI SI S+L
Sbjct: 61 EEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 125 --SSSTAKQRPEDNDR 138
++S A Q ++N R
Sbjct: 120 SPANSQAAQLYQENKR 135
>UBC2_HUMAN (P63146) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19)
(Ubiquitin-protein ligase B) (Ubiquitin carrier protein
B) (HR6B) (hHR6B) (E2-17 kDa)
Length = 152
Score = 83.6 bits (205), Expect = 2e-16
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 10/136 (7%)
Query: 12 LSKIACNRLQKELVEWQVNPPTGFKHRVTDN-LQRWVIEVGGAPGTLYSNETYQLQVDFP 70
+S A RL ++ Q +PP G ++N + +W + G GT + + T++L ++F
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 71 ENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML------ 124
E YP + P V FL HP++Y++G ICLDIL + WSP VSSI SI S+L
Sbjct: 61 EEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 125 --SSSTAKQRPEDNDR 138
++S A Q ++N R
Sbjct: 120 SPANSQAAQLYQENKR 135
>UBCB_ARATH (P35134) Ubiquitin-conjugating enzyme E2-17 kDa 11 (EC
6.3.2.19) (Ubiquitin-protein ligase 11) (Ubiquitin
carrier protein 11)
Length = 148
Score = 83.2 bits (204), Expect = 2e-16
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 15 IACNRLQKELVEWQVNPPTGFKHR-VTDNLQRWVIEVGGAPGTLYSNETYQLQVDFPENY 73
+A R+ KEL + Q +PP+ V +++ W + G P + Y+ + + + FP +Y
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 74 PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
P + P+V F HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+
Sbjct: 61 PFKPPKVSFKTKV-YHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.132 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,050,687
Number of Sequences: 164201
Number of extensions: 857121
Number of successful extensions: 1989
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1714
Number of HSP's gapped (non-prelim): 145
length of query: 161
length of database: 59,974,054
effective HSP length: 101
effective length of query: 60
effective length of database: 43,389,753
effective search space: 2603385180
effective search space used: 2603385180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Medicago: description of AC136451.5