Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136286.2 - phase: 0 
         (251 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GAOA_DACDE (Q01745) Galactose oxidase precursor (EC 1.1.3.9) (GAO)     53  6e-07
NOSZ_PARDE (Q51705) Nitrous-oxide reductase precursor (EC 1.7.99...    35  0.22
NOSZ_ACHCY (P94127) Nitrous-oxide reductase precursor (EC 1.7.99...    33  0.85
GIDA_XANCP (Q8PDG1) Glucose inhibited division protein A               33  0.85
GIDA_XANAC (Q8PQE8) Glucose inhibited division protein A               31  2.5
ABA2_MOUSE (Q9D6J4) Amyloid beta A4 protein-binding family A mem...    31  2.5
CHIA_ECOLI (P13656) Probable bifunctional chitinase/lysozyme pre...    29  9.4
BGL2_SACFI (P22507) Beta-glucosidase 2 precursor (EC 3.2.1.21) (...    29  9.4
ALA3_ARATH (Q9XIE6) Potential phospholipid-transporting ATPase 3...    29  9.4

>GAOA_DACDE (Q01745) Galactose oxidase precursor (EC 1.1.3.9) (GAO)
          Length = 680

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 62/246 (25%), Positives = 93/246 (37%), Gaps = 50/246 (20%)

Query: 8   RVMPDMLLLPTGNVIILNGAANGTAGWENAANPVLYPVLYKPGLDNPFMKFELLAPASTP 67
           R     ++LP G+  I  G   G    ++   PV  P +Y P  D     F    P S  
Sbjct: 480 RTFHTSVVLPDGSTFITGGQRRGIPFEDST--PVFTPEIYVPEQDT----FYKQNPNSIV 533

Query: 68  RMYHSSAVLLPDGRILVGGSNPHRLYDFQAKYPTELSLDAYYPDYLRPELDTL--RPVIV 125
           R+YHS ++LLPDGR+  GG       D    +        + P+YL      L  RP I 
Sbjct: 534 RVYHSISLLLPDGRVFNGGGG--LCGDCTTNH---FDAQIFTPNYLYNSNGNLATRPKIT 588

Query: 126 AVEVVNSTLSYESLFSVSFLLREVKDVNRIRVSMVAPSFTTHSFAMNQRLLFLEVTALEE 185
                +  +      S         D +  + S++     TH+   +QR + L +T    
Sbjct: 589 RTSTQSVKVGGRITIST--------DSSISKASLIRYGTATHTVNTDQRRIPLTLT---- 636

Query: 186 VVNSMQDQNFGEFGFGSSLGPGKIANSVYKATVRGPPSLNVAPPGYYMLFVIH-VGIPSV 244
                                    N     + + P    VA PGY+MLFV++  G+PSV
Sbjct: 637 ------------------------NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSV 672

Query: 245 ATWVHV 250
           A+ + V
Sbjct: 673 ASTIRV 678


>NOSZ_PARDE (Q51705) Nitrous-oxide reductase precursor (EC 1.7.99.6)
           (N(2)OR) (N2O reductase)
          Length = 652

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 22/75 (29%), Positives = 39/75 (51%), Gaps = 3/75 (4%)

Query: 149 VKDVNRIRVSM--VAPSFTTHSFAMNQ-RLLFLEVTALEEVVNSMQDQNFGEFGFGSSLG 205
           ++D N++RV M  VAPSF+  SF + +   + + VT L+E+ +       G +G    +G
Sbjct: 550 IRDGNKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVAMEIG 609

Query: 206 PGKIANSVYKATVRG 220
           P   ++  + A   G
Sbjct: 610 PQMTSSVTFVAANPG 624


>NOSZ_ACHCY (P94127) Nitrous-oxide reductase precursor (EC 1.7.99.6)
           (N(2)OR) (N2O reductase)
          Length = 642

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 22/75 (29%), Positives = 39/75 (51%), Gaps = 3/75 (4%)

Query: 149 VKDVNRIRVSM--VAPSFTTHSFAMNQ-RLLFLEVTALEEVVNSMQDQNFGEFGFGSSLG 205
           ++D N++RV M  VAPSF+  SF + +   + + VT L+E+ +       G  G    +G
Sbjct: 540 IRDGNKVRVYMTSVAPSFSQPSFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNHGVAMEVG 599

Query: 206 PGKIANSVYKATVRG 220
           P + ++  + A   G
Sbjct: 600 PQQTSSVTFVAANPG 614


>GIDA_XANCP (Q8PDG1) Glucose inhibited division protein A
          Length = 634

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 26  GAANGTAGWENAANPVLYPVLYKPGLDNPFMKFELLAPASTPRMYHSSAVLLPDGRILVG 85
           G  NGT G+E AA   L   L      N   + + L PA +PR   +   +L D  I  G
Sbjct: 375 GQINGTTGYEEAAAQGLLAGL------NAARQAQAL-PAWSPRRDEAYLGVLVDDLITHG 427

Query: 86  GSNPHRLYDFQAKYPTELSLD 106
            + P+R++  +A+Y  +L  D
Sbjct: 428 TTEPYRMFTSRAEYRLQLRED 448


>GIDA_XANAC (Q8PQE8) Glucose inhibited division protein A
          Length = 634

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 26  GAANGTAGWENAANPVLYPVLYKPGLDNPFMKFELLAPASTPRMYHSSAVLLPDGRILVG 85
           G  NGT G+E AA   L   L      N     + L PA +PR   +   +L D  I  G
Sbjct: 375 GQINGTTGYEEAAAQGLLAGL------NAARHVQGL-PAWSPRRDEAYLGVLVDDLITHG 427

Query: 86  GSNPHRLYDFQAKYPTELSLD 106
            + P+R++  +A+Y  +L  D
Sbjct: 428 TTEPYRMFTSRAEYRLQLRED 448


>ABA2_MOUSE (Q9D6J4) Amyloid beta A4 protein-binding family A member
           2 binding protein (X11L-binding protein 51) (mXB51)
          Length = 353

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 15/80 (18%)

Query: 111 DYLRPELDTLRPVIVAVEVVN---------STLSYESL-----FSVSFLLRE-VKDVNRI 155
           DY    L   RPV+ A+E +N         + L YE       F   FLLRE V  +  +
Sbjct: 88  DYFSTHLGVYRPVLAALESLNRAVLTAMDTTKLEYEQASKVDQFVTRFLLRETVNQLQAL 147

Query: 156 RVSMVAPSFTTHSFAMNQRL 175
           + S+   S T  + A  QRL
Sbjct: 148 QTSLEGASDTLEAQAHGQRL 167


>CHIA_ECOLI (P13656) Probable bifunctional chitinase/lysozyme
           precursor [Includes: Chitinase (EC 3.2.1.14); Lysozyme
           (EC 3.2.1.17)]
          Length = 897

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 30/121 (24%), Positives = 57/121 (46%), Gaps = 10/121 (8%)

Query: 47  YKPGLDNPFMKFELLAPASTPRMYHSSAVLLPDGRILVGGSNPHRLYDFQAKYPTELSLD 106
           + PG DNP+ K+E   PA   + + +S V +   R++V G     L+  Q+  P  ++  
Sbjct: 445 FVPGGDNPWKKYE---PA---KAWSASTVYVKGDRVVVDGQAYEALFWTQSDNPALVANQ 498

Query: 107 AYYPDYLRPELDTLRPVIVAVEVVNSTLSY--ESLFSVSFLLR--EVKDVNRIRVSMVAP 162
                  RP     +    + E +N+   +  E+L++   L+R   V  +++ +V  V+P
Sbjct: 499 NATGSNSRPWKPLGKAQSYSNEELNNAPQFNPETLYASDTLIRFNGVNYISQSKVQKVSP 558

Query: 163 S 163
           S
Sbjct: 559 S 559


>BGL2_SACFI (P22507) Beta-glucosidase 2 precursor (EC 3.2.1.21)
           (Gentiobiase) (Cellobiase) (Beta-D-glucoside
           glucohydrolase)
          Length = 880

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 22/128 (17%)

Query: 101 TELSLDAYYPD------YLRPELDTLRP----VIVAVEVVNSTLSYESLFSVSFLLREVK 150
           T+ S+ A  PD      YL P  D++R     V+ +   VN+T S E+ + ++ LL+E  
Sbjct: 231 TKESISANIPDRAMHELYLWPFADSIRAGVGSVMCSYNRVNNTYSCENSYMINHLLKE-- 288

Query: 151 DVNRIRVSMVAPSFTTHSFAMNQRLLFLEVTALEEVVNSMQDQNFGEFGFGSSLGPGKIA 210
                   +    F    +A      +  ++ L+    SM  +  G +  G S     + 
Sbjct: 289 -------ELGFQGFVVSDWAAQMSGAYSAISGLD---MSMPGELLGGWNTGKSYWGQNLT 338

Query: 211 NSVYKATV 218
            +VY  TV
Sbjct: 339 KAVYNETV 346


>ALA3_ARATH (Q9XIE6) Potential phospholipid-transporting ATPase 3
           (EC 3.6.3.1) (Aminophospholipid flippase 3)
          Length = 1213

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 43  YPVLYKPGLDNPFMKFELLAPASTPRMYHS 72
           YP LY+ G+ N F K+ ++A  +T  +Y S
Sbjct: 967 YPELYREGIRNSFFKWRVVAVWATSAVYQS 996


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.321    0.138    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,454,403
Number of Sequences: 164201
Number of extensions: 1353185
Number of successful extensions: 2877
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2871
Number of HSP's gapped (non-prelim): 10
length of query: 251
length of database: 59,974,054
effective HSP length: 108
effective length of query: 143
effective length of database: 42,240,346
effective search space: 6040369478
effective search space used: 6040369478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)


Medicago: description of AC136286.2