BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135959.2 - phase: 0
(479 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TEGU_EBV (P03186) Large tegument protein 44 0.001
GDA9_WHEAT (P18573) Alpha/beta-gliadin MM1 precursor (Prolamin) 42 0.003
GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor (P... 42 0.003
GDA1_WHEAT (P04721) Alpha/beta-gliadin A-I precursor (Prolamin) 42 0.003
OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein) 42 0.005
KCN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassiu... 42 0.005
PCAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associa... 41 0.006
EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 41 0.006
FTSK_ECOLI (P46889) DNA translocase ftsK 41 0.008
ZIPA_SALTY (P55894) Cell division protein zipA 40 0.010
NCO6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in... 40 0.010
GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin) 40 0.010
AMEX_BOVIN (P02817) Amelogenin, class I precursor 40 0.013
TRX_DROME (P20659) Trithorax protein 40 0.017
FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK 40 0.017
AMEL_MONDO (Q28462) Amelogenin 40 0.017
TOB1_MOUSE (Q61471) Tob1 protein (Transducer of erbB-2 1) 39 0.023
HD_HUMAN (P42858) Huntingtin (Huntington's disease protein) (HD ... 39 0.023
GDA0_WHEAT (P02863) Alpha/beta-gliadin precursor (Prolamin) 39 0.023
NCO6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in... 39 0.039
>TEGU_EBV (P03186) Large tegument protein
Length = 3149
Score = 43.9 bits (102), Expect = 0.001
Identities = 58/229 (25%), Positives = 79/229 (34%), Gaps = 28/229 (12%)
Query: 31 AAQEQSATAIPVATSVIPTASTNARFAMPTGFPYGLPPFFTPSTAAGTSGTVNNGQIPGT 90
AA +A A S P ++ A A + P PP F P G + V P T
Sbjct: 343 AAPASAAPASAAPASAAPASAAPASAAPASAAPASSPPLFIPIPGLGHTPGV---PAPST 399
Query: 91 NPVFVNTTLPQTTATLDQLRYRGTPLGRSTLLVKAFHGTRKNVLGEIDLPITIDPETFLI 150
P + PQT R LG+ + K G R LP++ +T
Sbjct: 400 PPRASSGAAPQTPK-------RKKGLGKDSPHKKPTSGRR--------LPLSSTTDT--- 441
Query: 151 TFQVMDINAAQLPPSYPYAQYSQHPFFPPFYHQYPLPSGQPQ-VPVNAVVQQMQQQPPAQ 209
+ + +PP P + P P HQ P S P PV+ + + P
Sbjct: 442 --EDDQLPRTHVPPHRPPSAARLPPPVIPIPHQSPPASPTPHPAPVSTIAPSVTPSPRLP 499
Query: 210 QQ---QHQQARPTFPPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLPPR 255
Q QA P+ P IP+ PT TT PP PP+
Sbjct: 500 LQIPIPLPQAAPSNPKIPLTTPSPSPT-AAAAPTTTTLSPPPTQQQPPQ 547
>GDA9_WHEAT (P18573) Alpha/beta-gliadin MM1 precursor (Prolamin)
Length = 307
Score = 42.4 bits (98), Expect = 0.003
Identities = 30/86 (34%), Positives = 38/86 (43%), Gaps = 6/86 (6%)
Query: 153 QVMDINAAQLPPSYPYAQYSQ----HPFFPPFYHQYPLPSGQPQV--PVNAVVQQMQQQP 206
Q+ QLP P Y Q +P PF Q P P QPQ P + QQ QQQ
Sbjct: 77 QLQPFPQPQLPYPQPQLPYPQPQLPYPQPQPFRPQQPYPQSQPQYSQPQQPISQQQQQQQ 136
Query: 207 PAQQQQHQQARPTFPPIPMLYAELLP 232
QQQ+ QQ + +L +L+P
Sbjct: 137 QQQQQKQQQQQQQQILQQILQQQLIP 162
>GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor
(Prolamin)
Length = 296
Score = 42.4 bits (98), Expect = 0.003
Identities = 29/75 (38%), Positives = 34/75 (44%), Gaps = 13/75 (17%)
Query: 163 PPSYPYAQYSQHPFFPPFYHQYPLPSGQPQV-----PVNAVVQQMQQQPPAQQQQHQQAR 217
PP PY Q PPF Q P P QPQ P++ Q QQQ QQQQ QQ +
Sbjct: 88 PPQLPYPQP------PPFSPQQPYPQPQPQYPQPQQPISQQQAQQQQQQQQQQQQQQQQQ 141
Query: 218 PTFPPIPMLYAELLP 232
I L +L+P
Sbjct: 142 QILQQI--LQQQLIP 154
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/72 (34%), Positives = 31/72 (42%), Gaps = 6/72 (8%)
Query: 185 PLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPP-IPMLYAELLPTLLLRGHYTTR 243
P+P QPQ P Q Q P QQQQ + FPP P + P+ + Y
Sbjct: 24 PVPQPQPQNPSQP--QPQGQVPLVQQQQFPGQQQQFPPQQPYPQPQPFPS---QQPYLQL 78
Query: 244 QGKPPPDPLPPR 255
Q P P P PP+
Sbjct: 79 QPFPQPQPFPPQ 90
>GDA1_WHEAT (P04721) Alpha/beta-gliadin A-I precursor (Prolamin)
Length = 262
Score = 42.4 bits (98), Expect = 0.003
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 162 LPPSYPYAQYSQHPFFPPFYHQYPLPSGQPQV--PVNAVVQQMQQQPPAQQQQHQQARPT 219
L P PY+Q PF Q P P QPQ P + QQ QQQ QQQQ QQ +
Sbjct: 82 LQPQLPYSQPQ------PFRPQQPYPQPQPQYSQPQQPISQQQQQQQQQQQQQQQQQQQI 135
Query: 220 FPPIPMLYAELLPTL 234
I L +L+P +
Sbjct: 136 IQQI--LQQQLIPCM 148
Score = 31.2 bits (69), Expect = 6.2
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 15/81 (18%)
Query: 185 PLPSGQPQVPVNAVVQQMQQQPPAQQQQH----------QQARPTFPPIP--MLYAELLP 232
P+P QPQ P QQ Q+Q P QQQ QQ P P P Y +L P
Sbjct: 24 PVPQLQPQNPSQ---QQPQEQVPLVQQQQFLGQQQPFPPQQPYPQPQPFPSQQPYLQLQP 80
Query: 233 TLLLRGHYTTRQGKPPPDPLP 253
L + Y+ Q P P P
Sbjct: 81 FLQPQLPYSQPQPFRPQQPYP 101
>OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein)
Length = 2716
Score = 41.6 bits (96), Expect = 0.005
Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 17/98 (17%)
Query: 162 LPPSYP---YAQYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARP 218
LPP +P Y +Y P P+ + PLP G+P QQQP QQQ QQ P
Sbjct: 140 LPPPHPHPAYGRYHADPNMDPYRYGQPLPGGKP---------PQQQQPHPQQQPPQQPGP 190
Query: 219 TFPPIPMLYAELLPTLLLRGHYTT-----RQGKPPPDP 251
P +P +G T + PPP P
Sbjct: 191 GGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPPPPP 228
Score = 35.0 bits (79), Expect = 0.43
Identities = 28/94 (29%), Positives = 34/94 (35%), Gaps = 7/94 (7%)
Query: 163 PPSYPYAQYSQHPFFPPFY--HQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTF 220
PP P+ Q P + H+YP G P P Q QQQ P QQ
Sbjct: 1538 PPGAPHGPPIQQPAGVAQWDQHRYPPQQGPPPPPQQQQQPQQQQQQPPYQQVAGPPGQQP 1597
Query: 221 PPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLPP 254
P P +A++ P G PP PL P
Sbjct: 1598 PQAPPQWAQMNP-----GQTAQSGIAPPGSPLRP 1626
Score = 31.2 bits (69), Expect = 6.2
Identities = 36/112 (32%), Positives = 40/112 (35%), Gaps = 18/112 (16%)
Query: 165 SYPYAQYSQHPFFPPFYHQYPLPS---GQPQVPVNAVV--------QQMQQQPPAQQQQH 213
S P Q Q P Y P P G P P A V QQ Q PP QQ
Sbjct: 53 SDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQ 112
Query: 214 QQARPTFPPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLPP--RFRSDLKCD 263
Q PP P E P ++ YT PPP P P R+ +D D
Sbjct: 113 QHHGGPAPPPPGGAPEHAPG--VKEEYT---HLPPPHPHPAYGRYHADPNMD 159
>KCN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassium
channel protein 3 (SK3) (SKCa3)
Length = 736
Score = 41.6 bits (96), Expect = 0.005
Identities = 35/106 (33%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 170 QYSQHPFFPPFYHQYPL-PSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPPIPMLYA 228
Q P PP Q PL PS QPQ P QQ QQQ QQQQ QQ + L +
Sbjct: 39 QQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQQQQQQQQQQQQQQQPPHPLSQLAQLQS 98
Query: 229 ELLPTLLLRGHYTTRQGKPPPDP---LPPRFRSDLKCDFHQGALGH 271
+ + LL T + P + L P R + + + LGH
Sbjct: 99 QPVHPGLLHSSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGH 144
>PCAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated
protein (PC2 glutamine/Q-rich-associated protein)
(TPA-inducible gene-1) (TIG-1) (Activator-recruited
cofactor 105 kDa component) (ARC105) (CTG repeat protein
7a)
Length = 788
Score = 41.2 bits (95), Expect = 0.006
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 170 QYSQHPFFPPFYHQYPLPSGQPQVPVNAV----VQQMQQQPPAQQQQHQQARPTFPPI-- 223
Q Q +HQ Q Q + + +QQ QQQ QQQQ QQA PPI
Sbjct: 213 QQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQ 272
Query: 224 -PMLY-----AELLPTLLLRGHYTTRQGKPPPDPLPP 254
PM ++ LP L + H+ T+ +PPP P P
Sbjct: 273 PPMQQPQPPPSQALPQQLQQMHH-TQHHQPPPQPQQP 308
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein)
Length = 620
Score = 41.2 bits (95), Expect = 0.006
Identities = 30/98 (30%), Positives = 37/98 (37%), Gaps = 12/98 (12%)
Query: 163 PPSY--PYAQYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTF 220
PP+Y P Y+Q P PP Y P P P + PP Q PT+
Sbjct: 413 PPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTY 472
Query: 221 PPIPMLYAELLPTLLLRGHYTTRQGKPPP--DPLPPRF 256
P P Y+ P+ + PPP PLPP F
Sbjct: 473 SPPPPAYSPPPPSPI--------YSPPPPQVQPLPPTF 502
Score = 41.2 bits (95), Expect = 0.006
Identities = 27/91 (29%), Positives = 36/91 (38%), Gaps = 9/91 (9%)
Query: 163 PPSYPYAQYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPP 222
PP++ +A + P P H P P QPQ P + PP Q Q PT+ P
Sbjct: 234 PPTHRHAPPTHQP--SPLRHLPPSPRRQPQPPTYS-------PPPPAYAQSPQPSPTYSP 284
Query: 223 IPMLYAELLPTLLLRGHYTTRQGKPPPDPLP 253
P Y+ P+ + PPP P P
Sbjct: 285 PPPTYSPPPPSPIYSPPPPAYSPSPPPTPTP 315
Score = 35.0 bits (79), Expect = 0.43
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 157 INAAQLPPSYPYAQYSQHPFFPPFYHQY-PLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQ 215
I+ + PPSY S P P + Q P PS P Q PP+ ++
Sbjct: 113 ISPSHPPPSYGAPPPSHGPGHLPSHGQRPPSPSHGHAPPSGGHTPPRGQHPPSHRRPSPP 172
Query: 216 ARPTFPPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLPP 254
+R PP P YA+ PT + + + Q +PPP PP
Sbjct: 173 SRHGHPP-PPTYAQPPPTPI---YSPSPQVQPPPTYSPP 207
Score = 33.9 bits (76), Expect = 0.95
Identities = 29/104 (27%), Positives = 39/104 (36%), Gaps = 19/104 (18%)
Query: 163 PPSYPYAQYSQHPFFPPFYHQYPLPSGQPQVPVNA------VVQQMQQQPPAQQQ---QH 213
PP YAQ P + P P P+ P P + + Q QPP + H
Sbjct: 178 PPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHAPPTH 237
Query: 214 QQARPTFPPIPMLYAELLPTLLLRGHYTTRQGKPPP-DPLPPRF 256
+ A PT P P+ + P RQ +PP P PP +
Sbjct: 238 RHAPPTHQPSPLRHLPPSP---------RRQPQPPTYSPPPPAY 272
Score = 33.1 bits (74), Expect = 1.6
Identities = 27/102 (26%), Positives = 30/102 (28%), Gaps = 8/102 (7%)
Query: 163 PPSYPYAQYSQHPFF---PPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPT 219
PP Y P + PP Y P PS P P PP
Sbjct: 332 PPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQ 391
Query: 220 FPPIPMLYAELLPTLLLRGHYTTRQGKPP-----PDPLPPRF 256
PP P Y+ LP PP P PLPP +
Sbjct: 392 SPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTY 433
>FTSK_ECOLI (P46889) DNA translocase ftsK
Length = 1329
Score = 40.8 bits (94), Expect = 0.008
Identities = 36/91 (39%), Positives = 41/91 (44%), Gaps = 10/91 (10%)
Query: 164 PSYPYAQYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQ-QQPPAQQQQHQQARPTFPP 222
P P Q Q P P +Q QPQ PV Q Q QQP A QQQ+QQ P P
Sbjct: 760 PPQPQYQQPQQPVAPQPQYQ------QPQQPVAPQQQYQQPQQPVAPQQQYQQ--PQQPV 811
Query: 223 IPMLYAELLPTLLLRGHYTTRQGKPPPDPLP 253
P LL LL+R + +R P PLP
Sbjct: 812 APQPQDTLLHPLLMR-NGDSRPLHKPTTPLP 841
>ZIPA_SALTY (P55894) Cell division protein zipA
Length = 328
Score = 40.4 bits (93), Expect = 0.010
Identities = 26/85 (30%), Positives = 37/85 (42%), Gaps = 10/85 (11%)
Query: 170 QYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPPIPMLYAE 229
Q QH + PP+ P P+ PQ A +QQ QQP Q QQ +P+ PP+ +
Sbjct: 86 QSPQHQYQPPYASAQPRPAAPPQP--QAPMQQPVQQPVQPAPQPQQVQPSAPPVQPPQQQ 143
Query: 230 LLPTLLLRGHYTTRQGKPPPDPLPP 254
P ++ +P P PP
Sbjct: 144 PAP--------PSQAPQPVAQPAPP 160
>NCO6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in
breast cancer-3 protein) (Cancer-amplified
transcriptional coactivator ASC-2) (Activating signal
cointegrator-2) (ASC-2) (Peroxisome
proliferator-activated receptor-interacting protein) (PP
Length = 2063
Score = 40.4 bits (93), Expect = 0.010
Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 163 PPSYPYAQYSQHPF--FPPFYHQYPLPSGQP--QVPVNAVVQQMQQQPPAQQQQHQQARP 218
PP YP Q P PP Q+ P QP Q P + QQ Q PP+Q Q QQ +
Sbjct: 970 PPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQ 1029
Query: 219 TFPPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLPP 254
+ ML + P + ++ PP PL P
Sbjct: 1030 QQQMMMMLMMQQDPKSVRLP--VSQNVHPPRGPLNP 1063
Score = 34.3 bits (77), Expect = 0.73
Identities = 25/81 (30%), Positives = 35/81 (42%), Gaps = 5/81 (6%)
Query: 174 HPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPPIPMLYAELLPT 233
HP P ++ P+ PQ+ QQ QQQ QQQQ QQ + P + + P
Sbjct: 241 HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ 300
Query: 234 LLLRGHYTTRQGKPPPDPLPP 254
+R +T P P+PP
Sbjct: 301 -GIRPQFTA----PTQVPVPP 316
Score = 31.6 bits (70), Expect = 4.7
Identities = 18/51 (35%), Positives = 22/51 (42%), Gaps = 3/51 (5%)
Query: 168 YAQYSQHP---FFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQ 215
+ Q HP PP + P+ + P N Q QQQ QQQQ QQ
Sbjct: 225 HIQQQSHPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQ 275
>GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin)
Length = 319
Score = 40.4 bits (93), Expect = 0.010
Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 163 PPSYPYAQYSQHPFFPPFYHQYPLPSGQPQV--PVNAVVQQMQQQPPAQQQQHQQARPTF 220
PP PY Q FPP Q P P QPQ P + QQ QQ QQQQ QQ +
Sbjct: 88 PPQLPYPQPQS---FPP---QQPYPQQQPQYLQPQQPISQQQAQQQQQQQQQQQQQQQIL 141
Query: 221 PPIPMLYAELLP 232
I L +L+P
Sbjct: 142 QQI--LQQQLIP 151
Score = 34.3 bits (77), Expect = 0.73
Identities = 27/76 (35%), Positives = 32/76 (41%), Gaps = 14/76 (18%)
Query: 185 PLPSGQPQVPVNAVVQQM-----QQQPPAQQQQHQQARPTFPPIPMLYAELLPTLLLRGH 239
P+P QPQ P Q+ QQQ P QQQQ +P P P + P L L
Sbjct: 24 PVPQLQPQNPSQQQPQEQVPLVQQQQFPGQQQQFPPQQPY--PQPQPFPSQQPYLQL--- 78
Query: 240 YTTRQGKPPPDPLPPR 255
Q P P P PP+
Sbjct: 79 ----QPFPQPQPFPPQ 90
Score = 31.2 bits (69), Expect = 6.2
Identities = 29/97 (29%), Positives = 31/97 (31%), Gaps = 21/97 (21%)
Query: 161 QLPPSYPYAQYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQ----QQPPAQQQQHQQA 216
QL P P Q Q P Q P Q Q P Q Q QQP Q Q Q
Sbjct: 27 QLQPQNPSQQQPQEQV--PLVQQQQFPGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQP 84
Query: 217 RPTFPPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLP 253
+P P +P Y Q PP P P
Sbjct: 85 QPFPPQLP---------------YPQPQSFPPQQPYP 106
>AMEX_BOVIN (P02817) Amelogenin, class I precursor
Length = 213
Score = 40.0 bits (92), Expect = 0.013
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 173 QHPFFPPFYHQ--YPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPPIPMLYAEL 230
QH P +HQ PLP+ QP P Q +Q QP Q HQ +P P P+ +
Sbjct: 107 QHSMTPTQHHQPNLPLPAQQPFQP-----QSIQPQPHQPLQPHQPLQPMQPMQPL---QP 158
Query: 231 LPTLLLRGHYTTRQGKPPPDPLPPRF 256
L L + Q PP PLPP F
Sbjct: 159 LQPLQPQPPVHPIQPLPPQPPLPPIF 184
Score = 31.2 bits (69), Expect = 6.2
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 172 SQHPFFP---------PFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPP 222
+Q PF P P PL QP P+ +Q +Q QPP Q +P PP
Sbjct: 124 AQQPFQPQSIQPQPHQPLQPHQPLQPMQPMQPLQP-LQPLQPQPPVHPIQPLPPQPPLPP 182
Query: 223 I-PML-YAELLPTLLLRGHYTTRQGK 246
I PM +LP L L T + K
Sbjct: 183 IFPMQPLPPMLPDLPLEAWPATDKTK 208
>TRX_DROME (P20659) Trithorax protein
Length = 3726
Score = 39.7 bits (91), Expect = 0.017
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 23 NNTMTALLAAQEQSATAIPVATSVIPTASTNARFAMPTGFPYGLPPFF------TPSTAA 76
++T T +L ++P ++ AST+ + P +PP + AA
Sbjct: 2776 DDTTTQILQNANFQFQSVPTSSG----ASTSMDYTSPVMVTAKIPPVTQIKRTNAQAKAA 2831
Query: 77 GTSGTVNNGQIPGTNPVFVNTTLPQTTATLD-QLRYRGTPLGRSTLLVKAFHGT------ 129
G SG G++P P VN LP + T Q++ + + L +S + KA GT
Sbjct: 2832 GISGV---GKVP-PQPQVVNKVLPTSIVTQQSQVQVKNSNLKQSQVKGKAASGTGTTCGA 2887
Query: 130 -----------RKNVLGEIDLPITIDPETFLITFQVMDINAA----------QLPPSYPY 168
+ N++ I + + P+ T +V + N + QL P
Sbjct: 2888 PPSIASKPLQKKTNMIRPIH-KLEVKPKVMKPTPKVQNQNHSLLQQQQQQQPQLQQQIPA 2946
Query: 169 AQYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPPIPMLYA 228
+Q P + P + Q Q+ ++ QQQ P QQQQ Q +P+ P I + A
Sbjct: 2947 VVVNQVPKVTISQQRIPAQTQQQQLQQAQMIHIPQQQQPLQQQQ-VQVQPSMPIITLAEA 3005
Query: 229 ELL 231
++
Sbjct: 3006 PVV 3008
>FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK
Length = 1347
Score = 39.7 bits (91), Expect = 0.017
Identities = 49/169 (28%), Positives = 63/169 (36%), Gaps = 22/169 (13%)
Query: 99 LPQTTATLDQLRYRGT-PLGRSTLLVKAFHGTRKNVLGEIDLPITIDPETFLITFQVMDI 157
L + A Q RY G P G + + F + L + P L T V +
Sbjct: 699 LARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKAL------LDDGPHEPLFTPIVEPV 752
Query: 158 NAAQLPPSYPYAQYSQ--HPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQ 215
Q P + P QY Q P P +Q P PQ Q QQP A QQQ+QQ
Sbjct: 753 QQPQQPVA-PQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQYQQPQQPVAPQQQYQQ 811
Query: 216 -----------ARPTFPPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLP 253
+P P +P LL LL+R + +R P PLP
Sbjct: 812 PQQPVTQQPQYQQPQQPVVPQPQDTLLHPLLMR-NGDSRPLHKPTTPLP 859
>AMEL_MONDO (Q28462) Amelogenin
Length = 202
Score = 39.7 bits (91), Expect = 0.017
Identities = 37/106 (34%), Positives = 44/106 (40%), Gaps = 8/106 (7%)
Query: 157 INAAQ--LPPSYPYAQY-SQHPFFPPFYHQ--YPLPSGQPQVPVNAVVQQMQQQPPAQQ- 210
I AAQ PP P QHP P +HQ P P QP P A QQ Q P Q
Sbjct: 72 IMAAQQPAPPQQPVMPVPGQHPMAPTQHHQPNLPQPGQQPYQPQPA--QQPQPHQPIQPI 129
Query: 211 QQHQQARPTFPPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLPPRF 256
Q Q +P P PM + + + + + PP PLPP F
Sbjct: 130 QPIQPIQPMQPMQPMQPMQPMQPMQPQTPVHAVRPLPPQPPLPPMF 175
>TOB1_MOUSE (Q61471) Tob1 protein (Transducer of erbB-2 1)
Length = 363
Score = 39.3 bits (90), Expect = 0.023
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 38/175 (21%)
Query: 63 PYGLPPFFTPSTAAGTSGTVNNGQIPGTNPVFVNTT---LPQTTATLDQLRYRGTPL--- 116
P P P+++ +S + G +P F+ + L TTAT ++ T +
Sbjct: 136 PQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATKFGSTKMKNS 195
Query: 117 GRSTLLVKAFHGTRKNVLGEIDLPITIDPETFL----ITFQV-----MDINAAQLPPSYP 167
GRS+ + + I+L +T++ L I+ V + + + Q P P
Sbjct: 196 GRSSKVART---------SPINLGLTVNVNHLLKQKAISSSVHSLYGLGLGSQQQPQPQP 246
Query: 168 YAQYSQHPFFPPFYHQYPLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPP 222
Q Q P S QP P+ QQ QQQP QQQQ QQ P
Sbjct: 247 QQQQQQQP-----------SSSQPPPPLP---QQQQQQPQQQQQQQQQQTSALSP 287
>HD_HUMAN (P42858) Huntingtin (Huntington's disease protein) (HD
protein)
Length = 3144
Score = 39.3 bits (90), Expect = 0.023
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 200 QQMQQQPPAQQQQHQQARPTFPPIPMLYAELLPTLLLRGHYTTRQGKPPPDPLPP 254
QQ QQQ QQQQ QQ +P PP P + LP + Q +PPP P PP
Sbjct: 23 QQQQQQQQQQQQQQQQQQPPPPPPPPPPPQ-LPQPPPQAQPLLPQPQPPPPPPPP 76
>GDA0_WHEAT (P02863) Alpha/beta-gliadin precursor (Prolamin)
Length = 286
Score = 39.3 bits (90), Expect = 0.023
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 164 PSYPYAQYSQHPFFPPFYHQYPLPS-GQPQVPVNAVVQQMQQQPPAQQQQHQ 214
P PY+Q PF P + P P QPQ P++ QQ QQQ QQQQ Q
Sbjct: 84 PQLPYSQ--PQPFRPQQPYPQPQPQYSQPQQPISQQQQQQQQQQQQQQQQQQ 133
Score = 38.9 bits (89), Expect = 0.030
Identities = 29/74 (39%), Positives = 30/74 (40%), Gaps = 21/74 (28%)
Query: 163 PPSYPYAQ---------YSQHPFFP----------PFYHQYPLPSGQPQV--PVNAVVQQ 201
PP PY Q Y Q FP PF Q P P QPQ P + QQ
Sbjct: 58 PPQQPYPQPQPFPSQLPYLQLQPFPQPQLPYSQPQPFRPQQPYPQPQPQYSQPQQPISQQ 117
Query: 202 MQQQPPAQQQQHQQ 215
QQQ QQQQ QQ
Sbjct: 118 QQQQQQQQQQQQQQ 131
>NCO6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in
breast cancer-3 protein) (Cancer-amplified
transcriptional coactivator ASC-2) (Activating signal
cointegrator-2) (ASC-2) (Peroxisome
proliferator-activated receptor-interacting protein) (PP
Length = 2067
Score = 38.5 bits (88), Expect = 0.039
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 163 PPSYPYAQYSQHPF--FPPFYHQYPLPSGQP--QVPVNAVVQQMQQQPPAQQQQHQQ 215
PP YP Q P PP Q+ P QP Q P + QQ Q PP+Q Q QQ
Sbjct: 974 PPGYPTQPVEQRPLPQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQQQ 1030
Score = 38.1 bits (87), Expect = 0.050
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 168 YAQYSQHPF--FPPFYHQY-PLPSGQPQVPVNAVVQQMQQQPPAQQQQHQQARPTFPPIP 224
+ Q HP PP +H P+P + P N Q QQQ QQQQ QQ +
Sbjct: 225 HIQQQSHPSGSLPPAHHSMQPVPVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQ 284
Query: 225 MLYAELLPTLLLRGHYTTRQG------KPPPDPLPP 254
+ L T L+ H QG P P+PP
Sbjct: 285 QQQQQQLQTRPLQQHQQQPQGIRPQFTAPTQVPVPP 320
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,372,946
Number of Sequences: 164201
Number of extensions: 2891448
Number of successful extensions: 14396
Number of sequences better than 10.0: 226
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 12243
Number of HSP's gapped (non-prelim): 1156
length of query: 479
length of database: 59,974,054
effective HSP length: 114
effective length of query: 365
effective length of database: 41,255,140
effective search space: 15058126100
effective search space used: 15058126100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC135959.2