BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135801.7 - phase: 0
(189 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YSR2_CAEEL (Q09950) Hypothetical protein F59B10.2 in chromosome II 41 0.001
MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich pro... 37 0.027
VIT1_FUNHE (Q90508) Vitellogenin I precursor (VTG I) [Contains: ... 37 0.036
YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 36 0.061
VIT2_PERAM (Q9BPS0) Vitellogenin 2 precursor (Vg-2) 35 0.13
SLG1_YEAST (P54867) SLG1 protein precursor (Cell wall integrity ... 34 0.18
YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 in ... 34 0.23
H11_MOUSE (P43275) Histone H1.1 (H1 VAR.3) (H1a) 34 0.23
VIT1_CHICK (P87498) Vitellogenin I precursor (Minor vitellogenin... 33 0.30
VIT1_AEDAE (Q16927) Vitellogenin A1 precursor (VG) (PVG1) [Conta... 33 0.30
VIT2_CHICK (P02845) Vitellogenin II precursor (Major vitellogeni... 33 0.39
SR40_YEAST (P32583) Suppressor protein SRP40 33 0.51
NSR1_YEAST (P27476) Nuclear localization sequence binding protei... 33 0.51
NPBL_COPCI (Q00333) Rad9 protein (SCC2 homolog) 33 0.51
HDA5_HUMAN (Q9UQL6) Histone deacetylase 5 (HD5) (Antigen NY-CO-9) 33 0.51
E75C_DROME (P13055) Ecdysone-induced protein 75B isoform C (E75-C) 33 0.51
E75B_DROME (P17672) Ecdysone-induced protein 75B isoform B (E75-B) 33 0.51
E75A_DROME (P17671) Ecdysone-induced protein 75B isoform A (E75-A) 33 0.51
VIT1_PERAM (Q9U8M0) Vitellogenin 1 precursor (Vg-1) 32 0.67
IF42_YEAST (P39936) Eukaryotic initiation factor 4F subunit p130... 32 0.87
>YSR2_CAEEL (Q09950) Hypothetical protein F59B10.2 in chromosome II
Length = 482
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/144 (29%), Positives = 62/144 (42%), Gaps = 14/144 (9%)
Query: 34 PFKWEMQPGIAKESSPK----EVLPPLTP-PPKNLSLGLPKPSILELK--KPASTMSKLK 86
PFK +Q G S EV + P PP+ + P ++E K KPA +K
Sbjct: 143 PFKKAIQSGSESSDSDSIIFDEVFEEVLPSPPRKPAPARTAPIVVEKKIEKPA-----VK 197
Query: 87 FWKKRVVKIKSKKPQEVCFHEDFDILSRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTR 146
K R K K+ P E F D S + S+ SES S S S S S S + S++
Sbjct: 198 EQKARKKKEKTPTPTESSFESSSDSSSTSESSTSSES--SSSASESESESKSESQVSSSK 255
Query: 147 SSLHSVCSSCSEGNTKQVSRKPST 170
+S SS + G+ + + S+
Sbjct: 256 TSTSKASSSKAYGSDFESEKSSSS 279
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich
protein SMS1) (Protein kinase A interference protein)
Length = 376
Score = 37.0 bits (84), Expect = 0.027
Identities = 25/58 (43%), Positives = 30/58 (51%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPSTLGCFP 175
SS S S S SSFS SS+S + ST S+ S SS S +T S PST+ P
Sbjct: 108 SSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSSSLSSTPSSSSSPSTITSAP 165
>VIT1_FUNHE (Q90508) Vitellogenin I precursor (VTG I) [Contains:
Lipovitellin 1 (LV1); Phosvitin (PV); Lipovitellin 2
(LV2)]
Length = 1704
Score = 36.6 bits (83), Expect = 0.036
Identities = 24/58 (41%), Positives = 32/58 (54%)
Query: 110 DILSRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRK 167
D+ +R + SS S S S SS SSSSSS S S+ S S SS S ++ + SR+
Sbjct: 1115 DLAARTNSSSSSSSRRSRSSSSSSSSSSSSSSSSSSSSRRSSSSSSSSSSSSSRSSRR 1172
Score = 32.0 bits (71), Expect = 0.87
Identities = 23/48 (47%), Positives = 27/48 (55%), Gaps = 1/48 (2%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVS 165
SS S S S R SS SSSSSS S +S+R ++S SS S T S
Sbjct: 1143 SSSSSSSSSSRRSSSSSSSSSSSSSRSSR-RVNSTRSSSSSSRTSSAS 1189
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/66 (31%), Positives = 35/66 (52%), Gaps = 12/66 (18%)
Query: 111 ILSRLDCSSDSES------------MVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSE 158
++ R++ S D E+ ++S R +S SSSSSS S +RSS S SS S
Sbjct: 1049 LVKRINLSEDEETEEGGPVLVKLNKILSSRRNSSSSSSSSSSSSSESRSSRSSSSSSSSS 1108
Query: 159 GNTKQV 164
+++++
Sbjct: 1109 RSSRKI 1114
Score = 29.6 bits (65), Expect = 4.3
Identities = 43/162 (26%), Positives = 59/162 (35%), Gaps = 15/162 (9%)
Query: 6 IESNKILSRRSSVGCSSRISYYRSGEGVPFKWEMQPGIAKESSPKEVLPPLTPPPKNLSL 65
++ NKILS R + SS S S E + + SS K L T + S
Sbjct: 1069 VKLNKILSSRRNSSSSSSSSSSSSSESRSSRSSSSSSSSSRSSRKIDLAARTNSSSSSSS 1128
Query: 66 GLPKPSILELKKPASTMSKLKFWKKRVVKIKSKKPQEVCFHEDFDILSRLDCSSDSESMV 125
+ S +S+ S +R S S S S +
Sbjct: 1129 RRSRSSSSSSSSSSSSSSSSSSSSRRSSSSSSS--------------SSSSSSRSSRRVN 1174
Query: 126 SPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRK 167
S R SS SS +SS S + S S S SS S+ +K+V K
Sbjct: 1175 STRSSSSSSRTSSASSLASFFSDSSS-SSSSSDRRSKEVMEK 1215
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor
Length = 374
Score = 35.8 bits (81), Expect = 0.061
Identities = 24/57 (42%), Positives = 30/57 (52%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPSTLGCF 174
SS S S S SS SSSSSS S + T S+ S SS S ++ S +PS+ F
Sbjct: 184 SSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSF 240
Score = 35.4 bits (80), Expect = 0.079
Identities = 26/62 (41%), Positives = 29/62 (45%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPSTLGCFPMH 177
SS S S S SS SSSSSS S S+ SS S SS S ++ S P T H
Sbjct: 159 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSH 218
Query: 178 IS 179
S
Sbjct: 219 SS 220
Score = 33.9 bits (76), Expect = 0.23
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
SS + + SP SS SSSSSS S S+ SS S SS S ++ S S+
Sbjct: 146 SSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 198
Score = 32.3 bits (72), Expect = 0.67
Identities = 23/52 (44%), Positives = 26/52 (49%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPS 169
SS S S S SS SSSSSS S S+ SS S SS S ++ S S
Sbjct: 156 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 207
Score = 32.0 bits (71), Expect = 0.87
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
SS S S S SS SSSSSS S S+ SS + SS S ++ S S+
Sbjct: 176 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSS 228
Score = 31.6 bits (70), Expect = 1.1
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 119 SDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPSTL 171
S S S S SS SSSSSS S S+ SS S SS S ++ S S++
Sbjct: 156 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSV 208
Score = 31.2 bits (69), Expect = 1.5
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
+S S S S SS SSSSSS S S+ SS S SS S ++ S S+
Sbjct: 153 TSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 205
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/53 (41%), Positives = 26/53 (48%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
S S S S SS SSSSSS S S+ SS S SS S ++ S S+
Sbjct: 154 SPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 206
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
SS S + + SS SSSSSS S S+ SS S SS S ++ S S+
Sbjct: 145 SSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 197
Score = 30.0 bits (66), Expect = 3.3
Identities = 21/59 (35%), Positives = 28/59 (46%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPSTLGCFPM 176
++ S S SS SSSSSS S S+ SS S SS S ++ S S+ P+
Sbjct: 152 TTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPI 210
Score = 29.6 bits (65), Expect = 4.3
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
++ S S S SS SSSSSS S S+ SS S SS S ++ S S+
Sbjct: 151 TTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 203
Score = 29.3 bits (64), Expect = 5.7
Identities = 21/53 (39%), Positives = 26/53 (48%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
SS S S + S SSSSSS S S+ SS S SS S ++ S S+
Sbjct: 142 SSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 194
Score = 28.9 bits (63), Expect = 7.4
Identities = 24/69 (34%), Positives = 29/69 (41%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPSTLGCFPMH 177
S S S + S SSSSSS S S+ SS S SS S ++ S S+
Sbjct: 143 SPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 202
Query: 178 ISRVLVSIT 186
S V IT
Sbjct: 203 SSSSSVPIT 211
>VIT2_PERAM (Q9BPS0) Vitellogenin 2 precursor (Vg-2)
Length = 1876
Score = 34.7 bits (78), Expect = 0.13
Identities = 24/77 (31%), Positives = 37/77 (47%), Gaps = 4/77 (5%)
Query: 99 KPQEVCFHEDFDILSRLDCSSDSESMVSPRG----SSFSSSSSSMSLMKSTRSSLHSVCS 154
+ + +C ED +++ + +S + P SS SSSSSS S S+ S +S S
Sbjct: 1705 RDENICVREDVQLVNLTNHRHAEKSGIRPYDIDDDSSSSSSSSSSSSSSSSSSKSNSTSS 1764
Query: 155 SCSEGNTKQVSRKPSTL 171
S SE N + R + L
Sbjct: 1765 SSSESNESALPRGENKL 1781
>SLG1_YEAST (P54867) SLG1 protein precursor (Cell wall integrity and
stress response component 1)
Length = 378
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/64 (35%), Positives = 34/64 (52%), Gaps = 1/64 (1%)
Query: 102 EVCFHEDFDILSRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNT 161
E+C ED + +LD ++S S +S SS S+S+S S ST SS S SS + T
Sbjct: 96 EMCGGEDAYSVYQLDSDTNSNS-ISSSDSSTESTSASSSTTSSTTSSTTSTTSSTTSSTT 154
Query: 162 KQVS 165
++
Sbjct: 155 SSMA 158
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 in
chromosome II precursor
Length = 317
Score = 33.9 bits (76), Expect = 0.23
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
SS S S SS SSSSS S KS+ SS S SS S ++ + S PS+
Sbjct: 162 SSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSS 214
Score = 32.0 bits (71), Expect = 0.87
Identities = 25/69 (36%), Positives = 31/69 (44%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPSTLGCFPMH 177
SS S S SS SSSSSS S S+ SS S SS S ++K + S+
Sbjct: 163 SSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFS 222
Query: 178 ISRVLVSIT 186
S + S T
Sbjct: 223 SSSFITSTT 231
Score = 29.3 bits (64), Expect = 5.7
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 113 SRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
S+ SS S S S S SSSSSS KS+ SS S SS S ++K S+ S+
Sbjct: 170 SKSSSSSKSSSSSSSSSKSSSSSSSS---SKSSSSSSSSSKSSASPSSSKSSSKFSSS 224
>H11_MOUSE (P43275) Histone H1.1 (H1 VAR.3) (H1a)
Length = 212
Score = 33.9 bits (76), Expect = 0.23
Identities = 25/95 (26%), Positives = 41/95 (42%), Gaps = 1/95 (1%)
Query: 8 SNKILSRRSSVGCSSRISYYRSGEGVPFKWEMQPGIAKESSPKEVLPPLTPP-PKNLSLG 66
S K+ + S ++++S G K + G A + + K P P K S
Sbjct: 105 SFKLNKKAESKAITTKVSVKAKASGAAKKPKKTAGAAAKKTVKTPKKPKKPAVSKKTSKS 164
Query: 67 LPKPSILELKKPASTMSKLKFWKKRVVKIKSKKPQ 101
KP +++ KK A + +K K K + K K KP+
Sbjct: 165 PKKPKVVKAKKVAKSPAKAKAVKPKASKAKVTKPK 199
>VIT1_CHICK (P87498) Vitellogenin I precursor (Minor vitellogenin)
[Contains: Lipovitellin I (LVI); Phosvitin (PV);
Lipovitellin II (LVII); YGP42]
Length = 1912
Score = 33.5 bits (75), Expect = 0.30
Identities = 27/58 (46%), Positives = 29/58 (49%), Gaps = 1/58 (1%)
Query: 113 SRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCS-SCSEGNTKQVSRKPS 169
S D SS S S S SS SSSSSS S KS SS S + S S N+K S S
Sbjct: 1165 SSSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDSSSSSS 1222
Score = 30.0 bits (66), Expect = 3.3
Identities = 35/132 (26%), Positives = 47/132 (35%), Gaps = 5/132 (3%)
Query: 43 IAKESSPKEVLPPLTPPPKNLSLGLPKPSILELKKPASTMSKLKFWKKRVVKIKSKKPQE 102
I++ S P + S G P+ ++ + A+ F S
Sbjct: 1103 ISESSESTTSTPSSSDSDNRASQGDPQINLKSRQSKANEKKFYPFGDSSSSGSSSSSSSS 1162
Query: 103 VCFHEDFDILSRLDCSSDSESMVSPRGSSFSS-----SSSSMSLMKSTRSSLHSVCSSCS 157
D SR SSDS S S SS SS S SS S S+ S+ SS S
Sbjct: 1163 SSSSSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDSSSSSS 1222
Query: 158 EGNTKQVSRKPS 169
+ N+K S S
Sbjct: 1223 KSNSKGSSSSSS 1234
Score = 29.6 bits (65), Expect = 4.3
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
SSDS S SS SSSSSS S S+ S S SS S ++ + K S+
Sbjct: 1166 SSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDSS 1218
Score = 29.6 bits (65), Expect = 4.3
Identities = 21/51 (41%), Positives = 25/51 (48%)
Query: 120 DSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
DS S S SS SSSSSS S S SS SS S ++ S+ S+
Sbjct: 1149 DSSSSGSSSSSSSSSSSSSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSS 1199
Score = 29.3 bits (64), Expect = 5.7
Identities = 22/57 (38%), Positives = 27/57 (46%), Gaps = 1/57 (1%)
Query: 119 SDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPSTLGCFP 175
S S S S R SS SS+S S S +S S SS T+Q ++K S FP
Sbjct: 1198 SSSRSSKSNRSSS-SSNSKDSSSSSSKSNSKGSSSSSSKASGTRQKAKKQSKTTSFP 1253
>VIT1_AEDAE (Q16927) Vitellogenin A1 precursor (VG) (PVG1)
[Contains: Vitellin light chain (VL); Vitellin heavy
chain (VH)]
Length = 2148
Score = 33.5 bits (75), Expect = 0.30
Identities = 34/104 (32%), Positives = 46/104 (43%), Gaps = 14/104 (13%)
Query: 68 PKPSILELKKPA--STMSKLKFWKKRVVKIKSKKPQEVCFHEDFDILSRLDCSSDSESMV 125
PK S +E KP + +++ + IK KK E + + + D SSDS S
Sbjct: 444 PKISPVEQYKPLLDKVEKRGNRYRRDLNAIKEKKYYEAYKMDQYRLHRLNDTSSDSSSSD 503
Query: 126 SPRGSS------------FSSSSSSMSLMKSTRSSLHSVCSSCS 157
S SS +SSSSSS S S+ SS +S SS S
Sbjct: 504 SSSSSSSESKEHRNGTSSYSSSSSSSSSSSSSESSSYSSSSSSS 547
>VIT2_CHICK (P02845) Vitellogenin II precursor (Major vitellogenin)
[Contains: Lipovitellin I (LVI); Phosvitin (PV);
Lipovitellin II (LVII); YGP40]
Length = 1850
Score = 33.1 bits (74), Expect = 0.39
Identities = 26/58 (44%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
Query: 113 SRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
S+ SS S S S R SS SSSSSS S S+ SS S SS S ++K S S+
Sbjct: 1190 SKRSSSSSSSSSSSSRSSSSSSSSSSNS-KSSSSSSKSSSSSSRSRSSSKSSSSSSSS 1246
Score = 32.3 bits (72), Expect = 0.67
Identities = 23/58 (39%), Positives = 29/58 (49%)
Query: 113 SRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
S+ S S S SS SSSSSS S S+ SS +S SS S ++ SR S+
Sbjct: 1179 SKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSS 1236
Score = 32.0 bits (71), Expect = 0.87
Identities = 24/68 (35%), Positives = 31/68 (45%)
Query: 98 KKPQEVCFHEDFDILSRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCS 157
KKP + ++ D SS S S S S SSS SS S +S+ SS S SS S
Sbjct: 1147 KKPMDEEENDQVKQARNKDASSSSRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSSRS 1206
Query: 158 EGNTKQVS 165
++ S
Sbjct: 1207 SSSSSSSS 1214
Score = 31.6 bits (70), Expect = 1.1
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
S S S S +S SSSSSS S S+RS S SS S ++ S K S+
Sbjct: 1204 SRSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSS 1256
Score = 30.4 bits (67), Expect = 2.5
Identities = 24/67 (35%), Positives = 35/67 (51%), Gaps = 2/67 (2%)
Query: 106 HEDFDILSRLDCSSDSESMVSPRGSSFS--SSSSSMSLMKSTRSSLHSVCSSCSEGNTKQ 163
++D SR SS+S S + S+ S SSSSS S S+RSS S SS + ++
Sbjct: 1163 NKDASSSSRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNSKSSSS 1222
Query: 164 VSRKPST 170
S+ S+
Sbjct: 1223 SSKSSSS 1229
Score = 29.6 bits (65), Expect = 4.3
Identities = 20/40 (50%), Positives = 22/40 (55%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCS 157
SS S S S + SS SSSSSS S KS+ S S S S
Sbjct: 1228 SSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSSKSS 1267
>SR40_YEAST (P32583) Suppressor protein SRP40
Length = 406
Score = 32.7 bits (73), Expect = 0.51
Identities = 21/55 (38%), Positives = 27/55 (48%)
Query: 116 DCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
D SDS S GSS SSSSS S +ST S S G++ ++ K +T
Sbjct: 235 DSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSELETKEAT 289
Score = 32.3 bits (72), Expect = 0.67
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
SS S S S SS SSSSSS S +S+ SS S SS S+ + S S+
Sbjct: 26 SSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSS 78
Score = 32.3 bits (72), Expect = 0.67
Identities = 23/48 (47%), Positives = 26/48 (53%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVS 165
SSDSES S SS SSSSSS S S S S SS S ++ + S
Sbjct: 70 SSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESS 117
Score = 31.6 bits (70), Expect = 1.1
Identities = 27/86 (31%), Positives = 35/86 (40%)
Query: 84 KLKFWKKRVVKIKSKKPQEVCFHEDFDILSRLDCSSDSESMVSPRGSSFSSSSSSMSLMK 143
K+K + + +K K+ +E S SS S S S G S SSSSSS S
Sbjct: 5 KIKVDEVPKLSVKEKEIEEKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSS 64
Query: 144 STRSSLHSVCSSCSEGNTKQVSRKPS 169
S S SS S ++ S S
Sbjct: 65 SDSSDSSDSESSSSSSSSSSSSSSSS 90
Score = 31.2 bits (69), Expect = 1.5
Identities = 22/58 (37%), Positives = 27/58 (45%)
Query: 113 SRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
S D SSDS+S S S SSSSS S + S S S S G++ S S+
Sbjct: 202 SSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSS 259
Score = 30.4 bits (67), Expect = 2.5
Identities = 22/50 (44%), Positives = 26/50 (52%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRK 167
SS S S SS S SSSS S S+ SS S S SE TK+ +R+
Sbjct: 83 SSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETKKRARE 132
Score = 30.0 bits (66), Expect = 3.3
Identities = 26/69 (37%), Positives = 28/69 (39%)
Query: 97 SKKPQEVCFHEDFDILSRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSC 156
S E D D S SSDSES S SSSSSS S S SS S S
Sbjct: 163 SSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSD 222
Query: 157 SEGNTKQVS 165
S ++ S
Sbjct: 223 SSSSSSSSS 231
Score = 30.0 bits (66), Expect = 3.3
Identities = 23/61 (37%), Positives = 29/61 (46%)
Query: 110 DILSRLDCSSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPS 169
+I + SS S S S SS SSSSSS S+ SS S SS S ++ S S
Sbjct: 20 EIEEKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSS 79
Query: 170 T 170
+
Sbjct: 80 S 80
Score = 29.6 bits (65), Expect = 4.3
Identities = 21/53 (39%), Positives = 26/53 (48%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
SS S S S SS SSSSSS S+ SS S S S+ + + S S+
Sbjct: 29 SSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSS 81
Score = 28.5 bits (62), Expect = 9.7
Identities = 23/55 (41%), Positives = 27/55 (48%), Gaps = 1/55 (1%)
Query: 116 DCSSDSESMVSPRGSSFSSSSSSMSLMK-STRSSLHSVCSSCSEGNTKQVSRKPS 169
D SSDS+S S SS S SSS S S+ S S S SE TK+ + S
Sbjct: 239 DSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSELETKEATADES 293
Score = 28.5 bits (62), Expect = 9.7
Identities = 20/53 (37%), Positives = 25/53 (46%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
S S+S S SS SSSSSS S + SS S SS ++ S S+
Sbjct: 65 SDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESS 117
>NSR1_YEAST (P27476) Nuclear localization sequence binding protein
(P67)
Length = 414
Score = 32.7 bits (73), Expect = 0.51
Identities = 31/88 (35%), Positives = 38/88 (42%), Gaps = 3/88 (3%)
Query: 83 SKLKFWKKRVVKIKSKKPQEVCFHEDFDILSRLDCSSDSESMVSPRGSSFSSSSSSMSLM 142
+K+K KK V K K ++ S SS SES S SSSSSS S
Sbjct: 5 TKVKGNKKEVKASKQAKEEKAKAVSSSSSESSSSSSSSSESESESESESESSSSSSSS-- 62
Query: 143 KSTRSSLHSVCSSCSEGNTKQVSRKPST 170
+ SS S S SE TK+ K S+
Sbjct: 63 -DSESSSSSSSDSESEAETKKEESKDSS 89
>NPBL_COPCI (Q00333) Rad9 protein (SCC2 homolog)
Length = 2157
Score = 32.7 bits (73), Expect = 0.51
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 25/137 (18%)
Query: 41 PGIAKESSPKE--VLPPLTPPPKNLSLGLPKPSILELKKPASTMSKLKFWKKRVVKIKSK 98
P K P+E +P +P P +LS + PS LK +K VV+I S
Sbjct: 318 PARMKTPPPREQKAVPDSSPDPLSLSSNMALPSSTPLK------------RKCVVEIHSP 365
Query: 99 KPQEVCFHEDFDILSRLDCSSDSESMVSPRGSSF--SSSSSSMSLMKSTRSSLHSVCS-S 155
P+ + ++ ++ S+ + RG+ +S +S+ S + +T SS S+ S S
Sbjct: 366 PPKRIQSYKPMTLI--------SQPLTPSRGAPLTPTSRASNASSVPTTASSSTSITSMS 417
Query: 156 CSEGNTKQVSRKPSTLG 172
S T ++ P +G
Sbjct: 418 SSSKTTVPMTPTPQRIG 434
>HDA5_HUMAN (Q9UQL6) Histone deacetylase 5 (HD5) (Antigen NY-CO-9)
Length = 1122
Score = 32.7 bits (73), Expect = 0.51
Identities = 43/150 (28%), Positives = 62/150 (40%), Gaps = 17/150 (11%)
Query: 34 PFKWEMQPGIAKESSPKEVLPPLTPPPKNLSLGLPKPS--ILELKKPASTMSKLKFWKKR 91
P W +SSP + PP TPP L L P S L+K AS +
Sbjct: 211 PKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLPGPYDSRDDFPLRKTASEPN-------- 262
Query: 92 VVKIKSKKPQEVCFHEDFDILSRLD---CSSDSESMVSPRGSSFSSSSSSMSLMKSTRSS 148
+K++S+ Q+V +L R D S+ + V G+ +SS S S SS
Sbjct: 263 -LKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGAGPGASSVCNSAPGSGPSS 321
Query: 149 LHSVCSSCSE-GNTKQVSRKPSTLGCFPMH 177
+S S+ +E G T V P+ + P H
Sbjct: 322 PNSSHSTIAENGFTGSVPNIPTEM--LPQH 349
>E75C_DROME (P13055) Ecdysone-induced protein 75B isoform C (E75-C)
Length = 1443
Score = 32.7 bits (73), Expect = 0.51
Identities = 20/49 (40%), Positives = 25/49 (50%)
Query: 122 ESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
+ VSP + SSSSSS S S+ SS S CSS S + + ST
Sbjct: 1245 QQSVSPHSNGSSSSSSSSSSSSSSSSSTSSNCSSSSASSCQYFQSPHST 1293
>E75B_DROME (P17672) Ecdysone-induced protein 75B isoform B (E75-B)
Length = 1394
Score = 32.7 bits (73), Expect = 0.51
Identities = 20/49 (40%), Positives = 25/49 (50%)
Query: 122 ESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
+ VSP + SSSSSS S S+ SS S CSS S + + ST
Sbjct: 1196 QQSVSPHSNGSSSSSSSSSSSSSSSSSTSSNCSSSSASSCQYFQSPHST 1244
>E75A_DROME (P17671) Ecdysone-induced protein 75B isoform A (E75-A)
Length = 1237
Score = 32.7 bits (73), Expect = 0.51
Identities = 20/49 (40%), Positives = 25/49 (50%)
Query: 122 ESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSCSEGNTKQVSRKPST 170
+ VSP + SSSSSS S S+ SS S CSS S + + ST
Sbjct: 1039 QQSVSPHSNGSSSSSSSSSSSSSSSSSTSSNCSSSSASSCQYFQSPHST 1087
>VIT1_PERAM (Q9U8M0) Vitellogenin 1 precursor (Vg-1)
Length = 1896
Score = 32.3 bits (72), Expect = 0.67
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 118 SSDSESMVSPRGSSFSSSSSSMSLMKSTRSSLHSVCSSC--SEGNTKQVSRKPSTLGCFP 175
SS SES S SS S+S+S ST SS S SS +EG ++ SRK S
Sbjct: 1754 SSSSESSSSSSSSSSESASNSDLHNNSTSSSSSSSSSSSESAEGAPEKSSRKTSPPQTST 1813
Query: 176 MHISRVLVSIT 186
+H + V+ +T
Sbjct: 1814 LHRTMVVEEVT 1824
>IF42_YEAST (P39936) Eukaryotic initiation factor 4F subunit p130
(eIF4F p130) (eIF-4F p130) (mRNA cap-binding protein
complex subunit p130)
Length = 914
Score = 32.0 bits (71), Expect = 0.87
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 14 RRSSVGCSSRISYYRSGEGVPFKWEMQPGIAKESSPKEVLPPLTPPPKNLSLGLPKPSIL 73
RRS+ G +SR ++ E A+E +PKE + PL P + + +PK +
Sbjct: 501 RRSNRGYTSRKDREKAAEK-----------AEEQAPKEEIAPLVP---SANRWIPKSRVK 546
Query: 74 ELKKPASTMSKLKFWKKRVVKIKSKKPQEVCFHEDFDILSR--LDCSSDSE 122
+ +K + K + + K V+ K K E FD +S LD ++ S+
Sbjct: 547 KTEKKLAPDGKTELFDKEEVERKMKSLLNKLTLEMFDSISSEILDIANQSK 597
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.313 0.128 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,448,665
Number of Sequences: 164201
Number of extensions: 873672
Number of successful extensions: 3981
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 3330
Number of HSP's gapped (non-prelim): 294
length of query: 189
length of database: 59,974,054
effective HSP length: 104
effective length of query: 85
effective length of database: 42,897,150
effective search space: 3646257750
effective search space used: 3646257750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Medicago: description of AC135801.7