BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135604.6 - phase: 0
(314 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S185_YEAST (P40856) SIT4-associating protein SAP185 39 0.022
YEM3_YEAST (P40021) Hypothetical 119.3 kDa protein in PIP1-GLN3 ... 38 0.029
SRC1_YEAST (Q03707) SRC1 protein 38 0.037
SMD4_MOUSE (Q8CBY1) Sterile alpha motif domain containing protein 4 37 0.083
DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contai... 37 0.083
DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains... 36 0.11
YBE6_YEAST (P38193) Hypothetical 50.7 kDa protein in SEC17-QCR1 ... 36 0.14
YGX7_YEAST (P53076) Hypothetical 108.2 kDa protein in SAP4-OST5 ... 35 0.24
S6AK_HUMAN (Q9NP91) Sodium- and chloride-dependent transporter X... 34 0.41
DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin... 34 0.41
ATC4_YEAST (Q12675) Potential phospholipid-transporting ATPase D... 34 0.41
YB00_YEAST (P38114) Putative 126.9 kDa transcriptional regulator... 34 0.54
TOP1_USTMA (P41511) DNA topoisomerase I (EC 5.99.1.2) 34 0.54
SNWA_DICDI (P54705) Protein snwA 34 0.54
SIS2_CANTR (Q12600) SIS2 protein (Halotolerance protein HAL3) 34 0.54
MDN1_GIALA (Q8T5T1) Midasin (MIDAS-containing protein) 34 0.54
YNV2_YEAST (P40157) Hypothetical 88.8 kDa protein in PEX17-MER1 ... 33 0.70
BA2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2... 33 0.70
ATA3_CHICK (Q9YGL9) Sarcoplasmic/endoplasmic reticulum calcium A... 33 0.70
A4_TETFL (O73683) Alzheimer's disease amyloid A4 protein homolog... 33 0.70
>S185_YEAST (P40856) SIT4-associating protein SAP185
Length = 1058
Score = 38.5 bits (88), Expect = 0.022
Identities = 38/168 (22%), Positives = 68/168 (39%), Gaps = 10/168 (5%)
Query: 5 LIDRLNDFQAGFNSLQQNPSFPSQITATSFNGIQSVSIA-FNFCKWGAVILALVATFTSL 63
L+ ++ A FN + P + TS+ I+ + F C+ A +L + +L
Sbjct: 436 LVKMFSEHMADFNKILTEKKIP--LLQTSYGTIEPLGFERFKICELIAELLH--CSNMTL 491
Query: 64 INKVTIFIIHLRKKASSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSS 123
+N+ + + I + A N D + E EN+D + + E EDD + S+
Sbjct: 492 LNEPSAYDIVRERDAERERIFNSQNYVDSNDRSELKENEDDNTGDADDEVEDDTNQVESA 551
Query: 124 SSFKDFFRLTGNSNDYDVNNVFQTQNSGHRRQHSIGDFFSLLELANGD 171
++ D + N + QN + QHS+ F+ NGD
Sbjct: 552 NTSIDGEEVIDKLNSLQIETNKVNQNMNNEEQHSLMPDFN-----NGD 594
>YEM3_YEAST (P40021) Hypothetical 119.3 kDa protein in PIP1-GLN3
intergenic region
Length = 1076
Score = 38.1 bits (87), Expect = 0.029
Identities = 33/123 (26%), Positives = 56/123 (44%), Gaps = 14/123 (11%)
Query: 87 DNDDDFSSDDEDNENDDI---------VSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSN 137
D+DDD+ DD+D+++DD +++ +SS +P +++ D + + N
Sbjct: 432 DHDDDYDDDDDDDDDDDESEFSFEYAGINVRTSSVKYYSKPEPAANVYIDDLYE---DEN 488
Query: 138 DYDVNNVFQTQNSGHRRQHSIGDFFSLLELANGDNVVKLWDSIGFGLGLDFDEYEDGVIS 197
D N + SG+ G E + N VK ++ + F L D DE EDG +
Sbjct: 489 FDDDMNCIEDDESGNEGNEICGLSTRFEETSLKSNKVKKFNDL-FNLS-DDDEEEDGKDN 546
Query: 198 STN 200
S N
Sbjct: 547 SNN 549
>SRC1_YEAST (Q03707) SRC1 protein
Length = 834
Score = 37.7 bits (86), Expect = 0.037
Identities = 22/71 (30%), Positives = 40/71 (55%), Gaps = 9/71 (12%)
Query: 76 KKASSLPSITFDNDDDFSSDDEDNENDD---IVSLSSSSEFEDDEPSMSSSSSFKDFFRL 132
KK L ++ D+DDD DD++++ DD + S + + E +D+E + +SSS K
Sbjct: 106 KKNRILDDVSNDDDDDDDDDDDNDKKDDPLIVPSGTDTDEVDDEEDDVITSSSNK----- 160
Query: 133 TGNSNDYDVNN 143
++ND+ N+
Sbjct: 161 -SDTNDFQQNS 170
>SMD4_MOUSE (Q8CBY1) Sterile alpha motif domain containing protein 4
Length = 623
Score = 36.6 bits (83), Expect = 0.083
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 145 FQTQNSGHRRQHSIGDFFSLLELANGDNVVKLW-DSIGFGLGLDFDEYEDGVISSTNPHA 203
F +QN G G + N D+ + W +S G+ + ++D + N H
Sbjct: 158 FGSQNRGRSDSVDYGQTHYYHQRQNSDDKLNGWQNSRDSGICISASNWQDKSLGCENGHV 217
Query: 204 PLTSAAASPDVIVSAGEGAHGNLAVEIWDTRLRR 237
PL S+++ P I + G GA N+ + RL +
Sbjct: 218 PLYSSSSVPATINTIGTGASTNVPAWLKSLRLHK 251
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains:
Dentin phosphoprotein (Dentin phosphophoryn) (DPP);
Dentin sialoprotein (DSP)]
Length = 1253
Score = 36.6 bits (83), Expect = 0.083
Identities = 23/71 (32%), Positives = 31/71 (43%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNVFQ 146
D+ D SSD DN + S SS+S D S SSS D + +SN D ++
Sbjct: 641 DSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSSSSDSSNSSDSSDSSD 700
Query: 147 TQNSGHRRQHS 157
+ NS S
Sbjct: 701 SSNSSESSDSS 711
Score = 35.8 bits (81), Expect = 0.14
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 79 SSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSND 138
SS S + D+D SSD + +++ + S SS+ D S SS S D + +S+D
Sbjct: 576 SSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSD 635
Query: 139 YDVNNVFQTQNSGHRRQHS 157
D + NS +S
Sbjct: 636 SDSKSDSSDSNSSDSSDNS 654
Score = 33.1 bits (74), Expect = 0.92
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 77 KASSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNS 136
K+ S S + D+ D+ S D N ++ S SS S D S S SSS D + +S
Sbjct: 639 KSDSSDSNSSDSSDNSDSSDSSNSSNS--SDSSDSSDSSDSSSSSDSSSSSDSSNSSDSS 696
Query: 137 NDYDVNNVFQTQNS 150
+ D +N ++ +S
Sbjct: 697 DSSDSSNSSESSDS 710
Score = 32.7 bits (73), Expect = 1.2
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 78 ASSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSN 137
+ S S + D+D SSD D+ + S SS S D + S SS D + +SN
Sbjct: 722 SDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSN 781
Query: 138 DYDVNNVFQTQNS 150
D N+ + +S
Sbjct: 782 SSDSNDSSNSSDS 794
Score = 31.2 bits (69), Expect = 3.5
Identities = 22/72 (30%), Positives = 31/72 (42%)
Query: 79 SSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSND 138
SS S + D+ D S D D+ N S SS S D + S SS D +SN
Sbjct: 835 SSNSSDSSDSSDSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNS 894
Query: 139 YDVNNVFQTQNS 150
D ++ + +S
Sbjct: 895 SDSSDSSNSSDS 906
Score = 30.8 bits (68), Expect = 4.6
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 76 KKASSLPSITFDNDDDFSSDDEDNEND--DIVSLSSSSEFED--DEPSMSSSSSFKDFFR 131
+ ++S S N D S D N +D D + S SSE + D + S SS+ D
Sbjct: 890 ESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSD 949
Query: 132 LTGNSNDYDVNNVFQTQNSGHRRQHSIGD 160
+ +SN D +N + NS + D
Sbjct: 950 SSDSSNSSDSSNSGDSSNSSDSSDSNSSD 978
Score = 30.0 bits (66), Expect = 7.8
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 79 SSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSND 138
SS S + D+D SSD ++ + D S +SS + + S SS+SS + NS+D
Sbjct: 707 SSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSD 766
>DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains:
Dentin phosphoprotein (Dentin phosphophoryn) (DPP);
Dentin sialoprotein (DSP)]
Length = 687
Score = 36.2 bits (82), Expect = 0.11
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNVFQ 146
D+ D SS+ D+++ D SSS + D S S+S D +GN N D ++
Sbjct: 614 DSSDSDSSNSSDSDSSDSSDSSSSDSSDSDSDSKDSTSDSSDDNSKSGNGNS-DSDSDSD 672
Query: 147 TQNSGHRRQHSIGD 160
+ + G HS D
Sbjct: 673 SDSEGSDSNHSTSD 686
Score = 33.1 bits (74), Expect = 0.92
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNVFQ 146
DND D S + +++D S SS S D S SS D + +S+ D +N
Sbjct: 534 DNDSDSESKSDSSDSDSDSSDSSDSSDSSDSSETSDSSDSSDTSDSSDSSDSSDSSNSSD 593
Query: 147 TQNS 150
T +S
Sbjct: 594 TSDS 597
Score = 32.0 bits (71), Expect = 2.1
Identities = 26/82 (31%), Positives = 37/82 (44%), Gaps = 2/82 (2%)
Query: 79 SSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSND 138
SS S + D+ D SSD + +++D S S SS D + S SS SS D +S D
Sbjct: 591 SSDTSDSSDSSDGDSSDGDSSDSDS--SDSDSSNSSDSDSSDSSDSSSSDSSDSDSDSKD 648
Query: 139 YDVNNVFQTQNSGHRRQHSIGD 160
++ SG+ S D
Sbjct: 649 STSDSSDDNSKSGNGNSDSDSD 670
Score = 30.4 bits (67), Expect = 6.0
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 85 TFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNV 144
T D DD S+ D+D+E+ D S +S ++D S S S S + +S+ D ++
Sbjct: 506 TSDTDDSDSNGDDDSESKD-KDESDNSNHDNDSDSESKSDSSDSDSDSSDSSDSSDSSDS 564
Query: 145 FQTQNS 150
+T +S
Sbjct: 565 SETSDS 570
Score = 30.0 bits (66), Expect = 7.8
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 87 DNDDDFSSDDEDNEND-DIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNVF 145
++ D SD+ +++ND D S S SS+ + D S SS D + +S+ D ++
Sbjct: 521 ESKDKDESDNSNHDNDSDSESKSDSSDSDSDSSDSSDSSDSSDSSETSDSSDSSDTSDSS 580
Query: 146 QTQNS 150
+ +S
Sbjct: 581 DSSDS 585
>YBE6_YEAST (P38193) Hypothetical 50.7 kDa protein in SEC17-QCR1
intergenic region
Length = 441
Score = 35.8 bits (81), Expect = 0.14
Identities = 16/45 (35%), Positives = 27/45 (59%), Gaps = 2/45 (4%)
Query: 87 DNDDDFSSD--DEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDF 129
DNDDD+ D DED+E+DD + + E +D++ S+ ++F
Sbjct: 270 DNDDDYREDGADEDDEDDDHMGSTDDDEDDDEDRQAGESTKVQNF 314
>YGX7_YEAST (P53076) Hypothetical 108.2 kDa protein in SAP4-OST5
intergenic region
Length = 958
Score = 35.0 bits (79), Expect = 0.24
Identities = 40/192 (20%), Positives = 73/192 (37%), Gaps = 36/192 (18%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFE-DDEPSMSSSSSFKDFFRLTGNSNDYDVNNVF 145
D+DDD DD+D++ D+ SL + + DD S + ++ D DV
Sbjct: 172 DDDDDDDDDDDDDDESDLESLEGEVDTDTDDNNEGDGSDNHEEGGEEGSRGADADV---- 227
Query: 146 QTQNSGHRRQHSIGDFFSLLELANGDNVV----KLWDSIGFGLGLDFDEYEDGVISSTNP 201
+S +R + D + + N+ LWD+ GL + P
Sbjct: 228 ---SSAQQRAERVADPWIYQRSRSAINIETESRNLWDTSDKNSGLQY----------YPP 274
Query: 202 HAPLTSAAASPDVIVSAGEGAHGNLAVEIWDTRLRRRKPSVV------------AEWGPT 249
+S+ +SP VS+G + N A + ++K S++ + W
Sbjct: 275 DQSPSSSFSSPR--VSSGNDKNDNEATNVLSNSGSKKKNSMIPDIYKILGYFLPSRWQAQ 332
Query: 250 VGNTLRVESGGV 261
N+L++ G+
Sbjct: 333 PNNSLQLSQDGI 344
>S6AK_HUMAN (Q9NP91) Sodium- and chloride-dependent transporter
XTRP3 (Solute carrier family 6 member 20)
(Neurotransmitter transporter rB21A homolog)
Length = 592
Score = 34.3 bits (77), Expect = 0.41
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 1 MQVPLIDRLNDFQAGFNSLQQ-----NPSFPSQITATSFNGIQSVSIAFNFCKWGAVILA 55
M P I++L + +A N+ Q F S I S+N N C+ A+I++
Sbjct: 227 MFTPKIEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPS------NNCQKHAIIVS 280
Query: 56 LVATFTSLINKVTIFIIH----------LRKKASSLPSITFDNDDDFSSDDEDNENDDIV 105
L+ +FTS+ + F I+ KK S L + TFD +D F + + +
Sbjct: 281 LINSFTSIFASIVTFSIYGFKATFNYENCLKKVSLLLTNTFDLEDGFLTASNLEQVKGYL 340
Query: 106 SLSSSSEFEDDEPSMSSSS 124
+ + S++ + P + + S
Sbjct: 341 ASAYPSKYSEMFPQIKNCS 359
>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin
matrix protein-3) (DMP-3) [Contains: Dentin
phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
sialoprotein (DSP)]
Length = 934
Score = 34.3 bits (77), Expect = 0.41
Identities = 24/76 (31%), Positives = 33/76 (42%), Gaps = 3/76 (3%)
Query: 88 NDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSN---DYDVNNV 144
+D SSD D+ + S SS+S D S SSS D +GN N + D N+
Sbjct: 858 SDSSDSSDSSDSSDSSDSSDSSNSSDSSDSDSKDSSSDSSDGDSKSGNGNSDSNSDSNSD 917
Query: 145 FQTQNSGHRRQHSIGD 160
+ + G HS D
Sbjct: 918 SDSDSEGSDSNHSTSD 933
Score = 31.2 bits (69), Expect = 3.5
Identities = 31/126 (24%), Positives = 51/126 (39%), Gaps = 2/126 (1%)
Query: 88 NDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNVFQT 147
+D SSD D+ + S SSSS D S S SS D + +S+ D ++ +
Sbjct: 622 SDSSDSSDSSDSSDSSDSSDSSSSSDSSDSSSCSDSSDSSDSSDSSDSSDSSDSSSSDSS 681
Query: 148 QNSGHRRQHSIGDFFSLLELANGDNVVKLWDSIGFGLGLDFDEYEDGVISSTNPHAPLTS 207
+S D S + ++ + DS G D D SS++ + +S
Sbjct: 682 SSSNSSDSSDSSDSSSSSDSSDSSDSSDSSDSSGSSDSSDSSASSDS--SSSSDSSDSSS 739
Query: 208 AAASPD 213
++ S D
Sbjct: 740 SSDSSD 745
Score = 30.8 bits (68), Expect = 4.6
Identities = 22/72 (30%), Positives = 32/72 (43%)
Query: 79 SSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSND 138
SS S + D+ D S D + +D S SSSS D S SSS D + +S+
Sbjct: 651 SSSCSDSSDSSDSSDSSDSSDSSDSSSSDSSSSSNSSDSSDSSDSSSSSDSSDSSDSSDS 710
Query: 139 YDVNNVFQTQNS 150
D + + +S
Sbjct: 711 SDSSGSSDSSDS 722
Score = 30.4 bits (67), Expect = 6.0
Identities = 19/64 (29%), Positives = 31/64 (47%), Gaps = 1/64 (1%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNVFQ 146
++ D+ S D DN +D S S SS+ DD S SS D + +S+ D ++
Sbjct: 526 EDKDESDSSDHDNSSDS-ESKSDSSDSSDDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 584
Query: 147 TQNS 150
+ +S
Sbjct: 585 SNSS 588
>ATC4_YEAST (Q12675) Potential phospholipid-transporting ATPase DNF2
(EC 3.6.3.1)
Length = 1612
Score = 34.3 bits (77), Expect = 0.41
Identities = 24/89 (26%), Positives = 44/89 (48%), Gaps = 12/89 (13%)
Query: 81 LPSITFDNDDDFSSDDEDNENDDIVSLSS-----SSEFEDDEPS-----MSSSSSFKD-- 128
L +TFD DD+S+D++ N++D++ + +E +DD S M ++ F+D
Sbjct: 73 LSKVTFDGIDDYSNDNDINDDDELNGKKTEIHEHENEVDDDLHSFQATPMPNTGGFEDVE 132
Query: 129 FFRLTGNSNDYDVNNVFQTQNSGHRRQHS 157
G++ND ++ + G RR S
Sbjct: 133 LDNNEGSNNDSQADHKLKRVRFGTRRNKS 161
>YB00_YEAST (P38114) Putative 126.9 kDa transcriptional regulatory
protein in YSW1-RIB7 intergenic region
Length = 1094
Score = 33.9 bits (76), Expect = 0.54
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDE 117
D+DDD DD+D++NDD S + + + E+D+
Sbjct: 999 DDDDDDDDDDDDDDNDDDYSNNGADDDEEDD 1029
Score = 32.0 bits (71), Expect = 2.1
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMS----SSSSFKDFFRLTGNSNDYDVN 142
D+DDD DD+D+ +DD + + + EDD+ S +S D +NDY
Sbjct: 1000 DDDDDDDDDDDDDNDDDYSNNGADDDEEDDDYDRSLFPTGLASLLDASYPERTANDYRDE 1059
Query: 143 N 143
N
Sbjct: 1060 N 1060
Score = 30.4 bits (67), Expect = 6.0
Identities = 13/31 (41%), Positives = 21/31 (66%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDE 117
D+DDD DD+D+++DD S++ +DDE
Sbjct: 996 DDDDDDDDDDDDDDDDDNDDDYSNNGADDDE 1026
Score = 30.0 bits (66), Expect = 7.8
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNVFQ 146
D+DDD DD+D+++D+ S++ +D+E S F TG ++ D + +
Sbjct: 997 DDDDDDDDDDDDDDDDNDDDYSNNGADDDEEDDDYDRSLFP-----TGLASLLDASYPER 1051
Query: 147 TQNSGHRRQHSIGDFFSLLE 166
T N F +E
Sbjct: 1052 TANDYRDENEQSNKLFEKIE 1071
>TOP1_USTMA (P41511) DNA topoisomerase I (EC 5.99.1.2)
Length = 1019
Score = 33.9 bits (76), Expect = 0.54
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 74 LRKKASSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSS 125
L KK++ D+DDD DD+D E+DD + +DD+P SS S
Sbjct: 100 LVKKSNGSDDDEDDDDDDDEGDDDDEEDDD------DDDDDDDKPLSKSSKS 145
Score = 30.4 bits (67), Expect = 6.0
Identities = 14/36 (38%), Positives = 20/36 (54%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSS 122
+ DDD DD+D+++DD LS SS+ P S
Sbjct: 119 EGDDDDEEDDDDDDDDDDKPLSKSSKSNRKPPKTMS 154
>SNWA_DICDI (P54705) Protein snwA
Length = 685
Score = 33.9 bits (76), Expect = 0.54
Identities = 18/67 (26%), Positives = 33/67 (48%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVNNVFQ 146
DND+D SSD++ N+ ++ S S + PS + + D +R+ N ++ +N+
Sbjct: 374 DNDNDSSSDEDKNKRTPPMNRRSRSRSTERIPSRNDNDDDDDRYRIKDNRDNRGRDNIDS 433
Query: 147 TQNSGHR 153
N R
Sbjct: 434 RDNRDSR 440
>SIS2_CANTR (Q12600) SIS2 protein (Halotolerance protein HAL3)
Length = 531
Score = 33.9 bits (76), Expect = 0.54
Identities = 19/60 (31%), Positives = 27/60 (44%), Gaps = 9/60 (15%)
Query: 83 SITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLTGNSNDYDVN 142
S D+DDD DD+D+++DD + E+D P S+ T NS D N
Sbjct: 480 SAIIDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDPPQQQST---------TDNSKDETTN 530
>MDN1_GIALA (Q8T5T1) Midasin (MIDAS-containing protein)
Length = 4835
Score = 33.9 bits (76), Expect = 0.54
Identities = 21/81 (25%), Positives = 44/81 (53%), Gaps = 7/81 (8%)
Query: 87 DNDDDFSSDDE----DNENDDIVSLSSSSEFEDDEPSMSSSSSF--KDFFRLTGNSNDYD 140
D DD+ +SD++ DN+ DD +++S+ + +DE M + + ++ ++N+
Sbjct: 4283 DIDDNEASDEQSTYNDNDRDDAINISAQQQATNDEEEMQKDTEYDQENITDSNPDANEVG 4342
Query: 141 VNNVFQT-QNSGHRRQHSIGD 160
N+ QT +++ RQ +I D
Sbjct: 4343 TNDQKQTHEDNDQFRQENIED 4363
>YNV2_YEAST (P40157) Hypothetical 88.8 kDa protein in PEX17-MER1
intergenic region
Length = 782
Score = 33.5 bits (75), Expect = 0.70
Identities = 74/310 (23%), Positives = 125/310 (39%), Gaps = 61/310 (19%)
Query: 22 NPSFPSQITATSFN-GIQSVSIAF-----NFCKWGAVILALVATFTSLINKVTIFIIHLR 75
NP+F A FN +Q++++++ + K A V +NK T + +
Sbjct: 289 NPTFELATDAFLFNYTLQNITLSYMLKFKDLDKCIQFRFAWVKCLWMTLNKETWTDVPEK 348
Query: 76 KK-----ASSLPSITFDND----DDFSSDDEDNENDDIVSLSSSSEFEDDEPSMS----S 122
+K +SS+P +D DD S+++ D E+ + + SE EDDE S S
Sbjct: 349 EKDYILDSSSVPLEKQFDDILHIDDRSNEERDKESSE---SENDSEDEDDENDHSKRIIS 405
Query: 123 SSSFKDFFRLTGNSNDYDVNNVFQTQNSGHRRQHSIGDFFSLLELANGDNVVKLWDSIGF 182
S +F++ R T N + F+ S R + IG F + + D DS+ F
Sbjct: 406 SEAFEEPRRATSKGNS-SLTVAFRNNRSYVTRDNRIGVF----KTDDED------DSLEF 454
Query: 183 GLGLDFDEYEDGVISSTNPHAPLTSAAASPDVIVSAGEGAH--------GNLAVEIWDTR 234
+ G S +PH P+ ++I++ GE + +E W T
Sbjct: 455 VAAIKNISNLGG--KSIDPHKPML-YMEDRNLILTDGENENKLYKMDIERGKVIEEWSTG 511
Query: 235 LRRRKPSVVAEWGPT--------VGNTLRVESGGVQKVYVRDNGRQRLTVGDMR----KV 282
+ V ++GPT + V GV K+ R NG+ ++ V + + K
Sbjct: 512 DKN-----VVQYGPTKKFDQMTPEQTIVGVSQKGVFKIDPRINGKNKIAVDESKDYVGKY 566
Query: 283 SFPLGNVTES 292
+F TES
Sbjct: 567 NFSSIGTTES 576
>BA2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B
(Extracellular matrix protein F22)
Length = 2130
Score = 33.5 bits (75), Expect = 0.70
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSS--------SEFEDDEPSMSSSSSFKD 128
D+D+D DDED+++DD S S S SE EDDE S D
Sbjct: 561 DDDEDEDEDDEDDDSDDSQSESDSNSESDTDGSEDEDDEDDKDQDESDTD 610
Score = 33.1 bits (74), Expect = 0.92
Identities = 17/42 (40%), Positives = 24/42 (56%), Gaps = 4/42 (9%)
Query: 87 DNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKD 128
D+DDD +DED+E+DD S S+ E D S S + +D
Sbjct: 558 DDDDDDEDEDEDDEDDD----SDDSQSESDSNSESDTDGSED 595
Score = 30.8 bits (68), Expect = 4.6
Identities = 15/41 (36%), Positives = 23/41 (55%)
Query: 88 NDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKD 128
NDDD +DED +++D S S SE + + S + S +D
Sbjct: 557 NDDDDDDEDEDEDDEDDDSDDSQSESDSNSESDTDGSEDED 597
>ATA3_CHICK (Q9YGL9) Sarcoplasmic/endoplasmic reticulum calcium
ATPase 3 (EC 3.6.3.8) (Calcium pump 3) (SERCA3) (SR
Ca(2+)-ATPase 3) (ChkSERCA3)
Length = 1042
Score = 33.5 bits (75), Expect = 0.70
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 206 TSAAASPDVIVSAGEGAHGNLAVEIWDTRLRRRKPSVVAEWGPTVGNTLRVESGGVQKVY 265
T+A P VI+ N V +W R + E+ P +G +R + GVQ++
Sbjct: 85 TTAFVEPIVIIMI---LIANAVVGVWQERNAESAIEALKEYEPEMGKVIRADRSGVQRIR 141
Query: 266 VRDNGRQRLTVGDMRKVSFPLGNVTESD-----ADNTWWDADAVIVTDES 310
RD + GD+ +V+ +G+ +D +T D I+T ES
Sbjct: 142 ARD-----IVPGDIVEVA--VGDKVPADIRIIEIRSTTLRVDQSILTGES 184
>A4_TETFL (O73683) Alzheimer's disease amyloid A4 protein homolog
precursor [Contains: Beta-amyloid protein (Beta-APP)
(A-beta)]
Length = 780
Score = 33.5 bits (75), Expect = 0.70
Identities = 39/196 (19%), Positives = 75/196 (37%), Gaps = 32/196 (16%)
Query: 82 PSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSMSSSSSFKDFFRLT--GNSNDY 139
PS+ + ++ + ++D E ++++ + E+D + +D + G S+D
Sbjct: 237 PSVVEEEEEGEVAQEDDEEEEEVLDTDQDGDGEEDHEAADDEEEEEDVDEIDAFGESDDV 296
Query: 140 DVN----NVFQTQNSGHRRQHSIGDFFSLLELANGDN-----VVKLW--DSI-------- 180
D + NV T + S+ + + A+ D + W D++
Sbjct: 297 DADEPTTNVAMTTTTTTTTTESVEEVVRMFCWAHADTGPCTASMPSWYFDAVDGRTMYEL 356
Query: 181 ---GFGLGLDFDEYEDGVISSTNPHAPLTSAAASPDVI-------VSAGEGAHGNLAVEI 230
G G ++ E E+ +S + P T +SPD + E AH A E
Sbjct: 357 MYGGCGGNMNNFESEEYCLSVCSSVVP-TDMPSSPDAVDHYLETPADENEHAHFQKAKES 415
Query: 231 WDTRLRRRKPSVVAEW 246
+ + R R V+ EW
Sbjct: 416 LEAKHRERMSQVMREW 431
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,310,630
Number of Sequences: 164201
Number of extensions: 1583604
Number of successful extensions: 9129
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 8022
Number of HSP's gapped (non-prelim): 566
length of query: 314
length of database: 59,974,054
effective HSP length: 110
effective length of query: 204
effective length of database: 41,911,944
effective search space: 8550036576
effective search space used: 8550036576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Medicago: description of AC135604.6