BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135565.1 - phase: 0
(150 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GUAD_BACSU (O34598) Guanine deaminase (EC 3.5.4.3) (Guanase) (Gu... 72 6e-13
Y903_AQUAE (O67050) Hypothetical protein AQ_903 62 5e-10
Y236_BUCBP (Q89AM8) Hypothetical protein bbp236 54 1e-07
TADA_HAEIN (P44931) tRNA-specific adenosine deaminase (EC 3.5.4.-) 54 1e-07
YAAJ_BACSU (P21335) Hypothetical protein yaaJ 53 2e-07
Y255_BUCAI (P57343) Hypothetical protein BU255 52 4e-07
Y246_BUCAP (Q8K9R4) Hypothetical protein BUsg246 50 2e-06
Y831_RICPR (Q9ZCC6) Hypothetical protein RP831 49 4e-06
TADA_SALTY (Q7CQ08) tRNA-specific adenosine deaminase (EC 3.5.4.-) 45 5e-05
TADA_SALTI (Q8XGY4) tRNA-specific adenosine deaminase (EC 3.5.4.-) 45 5e-05
TADA_SHIFL (P68397) tRNA-specific adenosine deaminase (EC 3.5.4.-) 45 6e-05
TADA_ECOLI (P68398) tRNA-specific adenosine deaminase (EC 3.5.4.-) 45 6e-05
TADA_ECOL6 (Q8FF24) tRNA-specific adenosine deaminase (EC 3.5.4.-) 45 6e-05
TADA_ECO57 (Q8XA44) tRNA-specific adenosine deaminase (EC 3.5.4.-) 45 6e-05
FCY1_YEAST (Q12178) Cytosine deaminase (EC 3.5.4.1) (Cytosine am... 33 0.31
ARO9_YEAST (P38840) Aromatic amino acid aminotransferase II (EC ... 32 0.52
FCA1_CANAL (P78594) Cytosine deaminase (EC 3.5.4.1) (Cytosine am... 32 0.68
DCTD_BPT4 (P16006) Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP... 30 1.5
DCTD_BPT2 (P00814) Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP... 30 1.5
CIN2_RAT (P04775) Sodium channel protein type II alpha subunit (... 30 1.5
>GUAD_BACSU (O34598) Guanine deaminase (EC 3.5.4.3) (Guanase)
(Guanine aminase) (Guanine aminohydrolase) (GAH)
(GDEase)
Length = 156
Score = 71.6 bits (174), Expect = 6e-13
Identities = 31/51 (60%), Positives = 39/51 (75%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKA 55
+ +PTAHAE+ AIR+ACK L L C LYTSCEPCPMC GAI++++ KA
Sbjct: 47 SNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKA 97
>Y903_AQUAE (O67050) Hypothetical protein AQ_903
Length = 151
Score = 62.0 bits (149), Expect = 5e-10
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 6 KEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVK 54
K+PTAHAE++AI+EAC++L+ L GCELY + EPC MC A+ S+++
Sbjct: 47 KDPTAHAEMLAIKEACRRLNTKYLEGCELYVTLEPCIMCSYALVLSRIE 95
>Y236_BUCBP (Q89AM8) Hypothetical protein bbp236
Length = 162
Score = 53.9 bits (128), Expect = 1e-07
Identities = 32/83 (38%), Positives = 41/83 (48%), Gaps = 7/83 (8%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVK-----ASMRR 59
N +PTAHAEI A+R K L L LY + EPC MC+GAI S++ A +
Sbjct: 48 NHDPTAHAEIKALRNGAKFLKNYRLLHTTLYVTLEPCIMCYGAIIHSRISRLVFGAKYKN 107
Query: 60 LS--FCLHNYTFLQSVLNYIDIT 80
L C N+ F+ I IT
Sbjct: 108 LQKYICCKNHFFINKNFRKISIT 130
>TADA_HAEIN (P44931) tRNA-specific adenosine deaminase (EC 3.5.4.-)
Length = 173
Score = 53.9 bits (128), Expect = 1e-07
Identities = 28/61 (45%), Positives = 35/61 (56%), Gaps = 4/61 (6%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRLSFCLHN 66
+PTAHAEIIA+R K + L LY + EPC MC GAI S++K RL F +
Sbjct: 57 DPTAHAEIIALRNGAKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIK----RLVFGASD 112
Query: 67 Y 67
Y
Sbjct: 113 Y 113
>YAAJ_BACSU (P21335) Hypothetical protein yaaJ
Length = 161
Score = 53.1 bits (126), Expect = 2e-07
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 10 AHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVK 54
AHAE++ I EACK L L G LY + EPCPMC GA+ S+V+
Sbjct: 52 AHAEMLVIDEACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVE 96
>Y255_BUCAI (P57343) Hypothetical protein BU255
Length = 161
Score = 52.4 bits (124), Expect = 4e-07
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 3 LRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVK 54
+ +PTAHAEIIA+R A KK+ L LY + +PC MC GAI S++K
Sbjct: 47 ISKNDPTAHAEIIALRGAGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIK 98
>Y246_BUCAP (Q8K9R4) Hypothetical protein BUsg246
Length = 151
Score = 49.7 bits (117), Expect = 2e-06
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 3 LRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVK 54
+ + TAHAEIIA+REA + + L LY + +PC MC GAI S++K
Sbjct: 47 ISQNDSTAHAEIIALREAGRNIKNYRLVNTTLYVTLQPCMMCCGAIINSRIK 98
>Y831_RICPR (Q9ZCC6) Hypothetical protein RP831
Length = 148
Score = 48.9 bits (115), Expect = 4e-06
Identities = 22/49 (44%), Positives = 29/49 (58%)
Query: 6 KEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVK 54
K P HAEIIAI AC + +L ++Y + EPC MC AI S++K
Sbjct: 43 KNPLCHAEIIAINTACNLISSKNLNDYDIYVTLEPCAMCASAISHSRLK 91
>TADA_SALTY (Q7CQ08) tRNA-specific adenosine deaminase (EC 3.5.4.-)
Length = 183
Score = 45.4 bits (106), Expect = 5e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+PTAHAEI+A+R+ L L LY + EPC MC GA+ S++
Sbjct: 64 DPTAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRI 110
>TADA_SALTI (Q8XGY4) tRNA-specific adenosine deaminase (EC 3.5.4.-)
Length = 183
Score = 45.4 bits (106), Expect = 5e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+PTAHAEI+A+R+ L L LY + EPC MC GA+ S++
Sbjct: 64 DPTAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRI 110
>TADA_SHIFL (P68397) tRNA-specific adenosine deaminase (EC 3.5.4.-)
Length = 178
Score = 45.1 bits (105), Expect = 6e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+PTAHAEI+A+R+ + L LY + EPC MC GA+ S++
Sbjct: 64 DPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRI 110
>TADA_ECOLI (P68398) tRNA-specific adenosine deaminase (EC 3.5.4.-)
Length = 178
Score = 45.1 bits (105), Expect = 6e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+PTAHAEI+A+R+ + L LY + EPC MC GA+ S++
Sbjct: 64 DPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRI 110
>TADA_ECOL6 (Q8FF24) tRNA-specific adenosine deaminase (EC 3.5.4.-)
Length = 178
Score = 45.1 bits (105), Expect = 6e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+PTAHAEI+A+R+ + L LY + EPC MC GA+ S++
Sbjct: 64 DPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRI 110
>TADA_ECO57 (Q8XA44) tRNA-specific adenosine deaminase (EC 3.5.4.-)
Length = 178
Score = 45.1 bits (105), Expect = 6e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+PTAHAEI+A+R+ + L LY + EPC MC GA+ S++
Sbjct: 64 DPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRI 110
>FCY1_YEAST (Q12178) Cytosine deaminase (EC 3.5.4.1) (Cytosine
aminohydrolase)
Length = 158
Score = 32.7 bits (73), Expect = 0.31
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 9 TAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAI 48
T H EI + E C +L+ LYT+ PC MC GAI
Sbjct: 60 TLHGEISTL-ENCGRLEGKVYKDTTLYTTLSPCDMCTGAI 98
>ARO9_YEAST (P38840) Aromatic amino acid aminotransferase II (EC
2.6.1.-)
Length = 513
Score = 32.0 bits (71), Expect = 0.52
Identities = 20/53 (37%), Positives = 26/53 (48%)
Query: 50 FSKVKASMRRLSFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARS 102
FSK+ A RLSF + N LQ +L+ DIT + Q +VY A S
Sbjct: 315 FSKIFAPGLRLSFIVANKFLLQKILDLADITTRAPSGTSQAIVYSTIKAMAES 367
>FCA1_CANAL (P78594) Cytosine deaminase (EC 3.5.4.1) (Cytosine
aminohydrolase)
Length = 150
Score = 31.6 bits (70), Expect = 0.68
Identities = 15/38 (39%), Positives = 21/38 (54%), Gaps = 1/38 (2%)
Query: 11 HAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAI 48
H E+ A+ A +L + C +YT+ PC MC GAI
Sbjct: 55 HGEMSALENA-GRLPGKTYKDCTIYTTLSPCSMCTGAI 91
>DCTD_BPT4 (P16006) Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP
deaminase)
Length = 193
Score = 30.4 bits (67), Expect = 1.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 11 HAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRLSFC 63
HAE+ AI A + + S+ G +Y + PCP C AI ++ +++L +C
Sbjct: 104 HAELNAILFAAR--NGSSIEGATMYVTLSPCPDCAKAI----AQSGIKKLVYC 150
>DCTD_BPT2 (P00814) Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP
deaminase)
Length = 188
Score = 30.4 bits (67), Expect = 1.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 11 HAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRLSFC 63
HAE+ AI A + + S+ G +Y + PCP C AI ++ +++L +C
Sbjct: 104 HAELNAILFAAR--NGSSIEGATMYVTLSPCPDCAKAI----AQSGIKKLVYC 150
>CIN2_RAT (P04775) Sodium channel protein type II alpha subunit
(Voltage-gated sodium channel alpha subunit Nav1.2)
(Sodium channel protein, brain II alpha subunit)
Length = 2005
Score = 30.4 bits (67), Expect = 1.5
Identities = 9/28 (32%), Positives = 21/28 (74%)
Query: 62 FCLHNYTFLQSVLNYIDITYLSYIHIKQ 89
FCL ++TFL++ N++D T +++ ++ +
Sbjct: 179 FCLEDFTFLRNPWNWLDFTVITFAYVTE 206
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.324 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,939,824
Number of Sequences: 164201
Number of extensions: 576363
Number of successful extensions: 2294
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2269
Number of HSP's gapped (non-prelim): 35
length of query: 150
length of database: 59,974,054
effective HSP length: 100
effective length of query: 50
effective length of database: 43,553,954
effective search space: 2177697700
effective search space used: 2177697700
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC135565.1