BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135464.8 - phase: 0
(559 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BLM_HUMAN (P54132) Bloom's syndrome protein (EC 3.6.1.-) (RecQ p... 37 0.14
GLG1_YEAST (P36143) Glycogen synthesis initiator protein GLG1 36 0.23
FABH_STRPY (Q99YD2) 3-oxoacyl-[acyl-carrier-protein] synthase II... 35 0.40
FABH_STRP8 (P64115) 3-oxoacyl-[acyl-carrier-protein] synthase II... 35 0.40
FABH_STRP3 (P64114) 3-oxoacyl-[acyl-carrier-protein] synthase II... 35 0.40
OSTP_PIG (P14287) Osteopontin precursor (Bone sialoprotein 1) (S... 35 0.52
RAF1_RAT (P11345) RAF proto-oncogene serine/threonine-protein ki... 35 0.67
RAF1_HUMAN (P04049) RAF proto-oncogene serine/threonine-protein ... 35 0.67
ICAL_MOUSE (P51125) Calpain inhibitor (Calpastatin) 35 0.67
PK2_DICDI (P28178) Protein kinase 2 (EC 2.7.1.-) 34 1.2
HTR6_HALN1 (Q9HR92) Halobacterial transducer protein VI 33 1.5
DGRE_DROME (O44424) DGCR14 protein homolog (ES2 protein) (dES2) 33 1.5
RAF1_CHICK (P05625) RAF proto-oncogene serine/threonine-protein ... 33 2.0
HSF1_HUMAN (Q00613) Heat shock factor protein 1 (HSF 1) (Heat sh... 33 2.6
CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14) 33 2.6
N100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore prot... 32 3.3
KLP1_SCHPO (Q92376) Kinesin-like protein 1 32 3.3
ICAL_BOVIN (P20811) Calpain inhibitor (Calpastatin) 32 3.3
HTR6_HALSA (Q48319) Halobacterial transducer protein VI 32 3.3
CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal Nek2-asso... 32 3.3
>BLM_HUMAN (P54132) Bloom's syndrome protein (EC 3.6.1.-) (RecQ
protein-like 3) (DNA helicase, RecQ-like, type 2)
Length = 1417
Score = 37.0 bits (84), Expect = 0.14
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 227 DAQHSDS--ANVSAAIHHSDDEDNLSAAAHHSDDVSPQ-NVTKDPLDFEFIPVMPDDINK 283
DAQ SDS ++ +S+ + NL A HS + P D D +F+P P++I
Sbjct: 251 DAQESDSLKTHLEDERDNSEKKKNLEEAELHSTEKVPCIEFDDDDYDTDFVPPSPEEIIS 310
Query: 284 ATLPSTSIHVLEETADTAEVPIEDTTAAAEPLFT--DVMALEAQTQTNRTDVELIAARVA 341
A+ S+ + DT++ ED + ++ L + + M+++ TD + AR
Sbjct: 311 ASSSSSKCLSTLKDLDTSDRK-EDVLSTSKDLLSKPEKMSMQELNPETSTDCD---ARQI 366
Query: 342 SLQHHEIPISKNV 354
SLQ I + +++
Sbjct: 367 SLQQQLIHVMEHI 379
>GLG1_YEAST (P36143) Glycogen synthesis initiator protein GLG1
Length = 618
Score = 36.2 bits (82), Expect = 0.23
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 157 VKEPLIDKKKKT----IISQKPQPPKWLPRDNLDGIGSSKAFEAPVGNNNAESIPTTHKV 212
V +P I KT I+ PP P N + I + E V N NAE +P +
Sbjct: 291 VSKPKISDSDKTETPETITPVDAPPSNEPTTNQE-IDTISTVEENVDNQNAEPVPNSDHS 349
Query: 213 ATKLPVQTD----LTESADAQHSDSANVSAAIHHSDDED-NLSAAAHHSDDVSPQNVTKD 267
PV D LT + H + V+ + +S + D N+ ++ + D SP N T++
Sbjct: 350 PAPNPVPLDFTKWLTTFINKDHLTNQPVNESREYSKENDNNIINSSSNRDQESPPNSTQE 409
>FABH_STRPY (Q99YD2) 3-oxoacyl-[acyl-carrier-protein] synthase III
(EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III)
Length = 324
Score = 35.4 bits (80), Expect = 0.40
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 210 HKVATKLPVQTDLTESADAQHS--DSANVSAAIHHSDDEDNLSAAAHHSDDVSPQNVTK- 266
H V +L DL D H S A H S DE A +D + Q+ K
Sbjct: 11 HYVPQQLVTNNDLASIMDTSHEWIFSRTGIAERHISRDEMTSDLAIQVADQLLTQSGLKA 70
Query: 267 DPLDFEFIPVMPDDINKATLPSTSIHVLEETADTAEVPIEDTTAAAEPLFTDVMA 321
D +DF + + D AT+PST+ V A T+ + T A + +F MA
Sbjct: 71 DAIDFIIVATISPD---ATMPSTAAKVQAAIAATSAFAFDMTAACSGFVFALAMA 122
>FABH_STRP8 (P64115) 3-oxoacyl-[acyl-carrier-protein] synthase III
(EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III)
Length = 324
Score = 35.4 bits (80), Expect = 0.40
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 210 HKVATKLPVQTDLTESADAQHS--DSANVSAAIHHSDDEDNLSAAAHHSDDVSPQNVTK- 266
H V +L DL D H S A H S DE A +D + Q+ K
Sbjct: 11 HYVPQQLVTNNDLASIMDTSHEWIFSRTGIAERHISRDEMTSDLAIQVADQLLTQSGLKA 70
Query: 267 DPLDFEFIPVMPDDINKATLPSTSIHVLEETADTAEVPIEDTTAAAEPLFTDVMA 321
D +DF + + D AT+PST+ V A T+ + T A + +F MA
Sbjct: 71 DAIDFIIVATISPD---ATMPSTAAKVQAAIAATSAFAFDMTAACSGFVFALAMA 122
>FABH_STRP3 (P64114) 3-oxoacyl-[acyl-carrier-protein] synthase III
(EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III)
Length = 324
Score = 35.4 bits (80), Expect = 0.40
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 210 HKVATKLPVQTDLTESADAQHS--DSANVSAAIHHSDDEDNLSAAAHHSDDVSPQNVTK- 266
H V +L DL D H S A H S DE A +D + Q+ K
Sbjct: 11 HYVPQQLVTNNDLASIMDTSHEWIFSRTGIAERHISRDEMTSDLAIQVADQLLTQSGLKA 70
Query: 267 DPLDFEFIPVMPDDINKATLPSTSIHVLEETADTAEVPIEDTTAAAEPLFTDVMA 321
D +DF + + D AT+PST+ V A T+ + T A + +F MA
Sbjct: 71 DAIDFIIVATISPD---ATMPSTAAKVQAAIAATSAFAFDMTAACSGFVFALAMA 122
>OSTP_PIG (P14287) Osteopontin precursor (Bone sialoprotein 1)
(Secreted phosphoprotein 1) (SPP-1)
Length = 303
Score = 35.0 bits (79), Expect = 0.52
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 223 TESADAQHSDSANVSAAIHHSDDEDNLSA---AAHHSDDVSPQNVTKDPLD 270
T+S +A H+D A+ S HHSD+ D L + DV+P T DP D
Sbjct: 102 TDSEEADHADDADRSDESHHSDESDELVTDFPTDTPATDVTPAVPTGDPND 152
Score = 32.7 bits (73), Expect = 2.6
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 204 ESIPTTHKVATKLPVQTD-LTESADAQHSDSANV-SAAIHHSDDEDNLSAAAHHSDDVSP 261
E++P+ + + P QTD + + D H DS + S H+DD D S +HHSD+ S
Sbjct: 72 ETLPSK---SNESPEQTDDVDDDDDEDHVDSRDTDSEEADHADDADR-SDESHHSDE-SD 126
Query: 262 QNVTKDPLDFEFIPVMP 278
+ VT P D V P
Sbjct: 127 ELVTDFPTDTPATDVTP 143
>RAF1_RAT (P11345) RAF proto-oncogene serine/threonine-protein
kinase (EC 2.7.1.37) (Raf-1) (C-RAF) (cRaf)
Length = 648
Score = 34.7 bits (78), Expect = 0.67
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 205 SIPTTHKVATKLPVQTDLTESADAQHSDSANVSAAIHHSDDEDNLS 250
S P H V+T LPV + + E A HS+SA+ SA S +NLS
Sbjct: 259 STPNVHMVSTTLPVDSRMIEDAIRSHSESASPSAL---SSSPNNLS 301
>RAF1_HUMAN (P04049) RAF proto-oncogene serine/threonine-protein
kinase (EC 2.7.1.37) (Raf-1) (C-RAF) (cRaf)
Length = 648
Score = 34.7 bits (78), Expect = 0.67
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 205 SIPTTHKVATKLPVQTDLTESADAQHSDSANVSAAIHHSDDEDNLS 250
S P H V+T LPV + + E A HS+SA+ SA S +NLS
Sbjct: 259 STPNVHMVSTTLPVDSRMIEDAIRSHSESASPSAL---SSSPNNLS 301
>ICAL_MOUSE (P51125) Calpain inhibitor (Calpastatin)
Length = 788
Score = 34.7 bits (78), Expect = 0.67
Identities = 62/276 (22%), Positives = 104/276 (37%), Gaps = 36/276 (13%)
Query: 143 NIGHHNSSCRWLHPVKEPLIDKKKKTIISQKPQPPKWLPRDNLDGIGSSKAFEAPVGNNN 202
N+ H SS H KE + + + ++S+KP K +D G S A V
Sbjct: 143 NLPKHTSSTGSKHAHKEKALSRSNEQMVSEKPSESKTKFQDVPSAGGESVAGGGTVAT-- 200
Query: 203 AESIPTTHKVATKLPVQTDLT-----ESADAQHSDSANVSAAIHHSDDEDNLSAAAHHSD 257
KV K Q T +S ++ SD + + AA+ D D L +
Sbjct: 201 -----ALDKVVGKKKEQKPFTPASPVQSTPSKPSDKSGMDAAL--DDLIDTLGGHEDTNR 253
Query: 258 DVSPQN--VTKDPLDFEFIPVMPDDINKATLPSTSIHVLEETADTAEVPIED------TT 309
D P V DP+ ++ + I + T+P +LE+ + P+ D T
Sbjct: 254 DDPPYTGPVVLDPMYSTYLEAL--GIKEGTIPPEYRKLLEKNEGITQ-PLPDSPKPMGTD 310
Query: 310 AAAEPL---FTDVMALEAQTQTNRTDVELIAARVASLQHHEIP-------ISKNVQHDLD 359
A + L FT Q++ ++ E+ A+ A + +P + + V +D
Sbjct: 311 QAIDALSSDFTCSSPTGKQSEKEKSTGEIFKAQSAGVTRSSVPPKEKKRKVEEEVINDQA 370
Query: 360 LWARIREYDQRMAEEGFTQVLSKKQQKDAKKASLRK 395
L A R + + V +Q K+AK R+
Sbjct: 371 LQALSDSLGTRQPDPP-SHVSQAEQVKEAKAKEERQ 405
>PK2_DICDI (P28178) Protein kinase 2 (EC 2.7.1.-)
Length = 479
Score = 33.9 bits (76), Expect = 1.2
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 191 SKAFEAPVGNNNAESIPTTHKVATKLPVQTDLTESADAQHSDSANVSAAIHHSDDE 246
+KA + GN N E+ PT+ T P Q +L SA Q +AA+ + E
Sbjct: 17 AKAGKPKKGNKNDETTPTSTPTPTPTPTQQNLDNSAQQQQQQQQTATAAVSLDNKE 72
>HTR6_HALN1 (Q9HR92) Halobacterial transducer protein VI
Length = 778
Score = 33.5 bits (75), Expect = 1.5
Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 32/198 (16%)
Query: 203 AESIPTTHKVATKLPVQTDLTESADAQHSDSANVSAAIHH-----SDDEDNLSAAAHHSD 257
A+ + +VAT TD ++SA A +VS A+ +D D L A A +D
Sbjct: 465 ADVVAFADEVAT---ASTDASDSAAAVEQTGRDVSDAVGRIRDRAADQRDQLEAVASETD 521
Query: 258 DVSPQNVTKDPLDFEFIPVMPDDINKATLPSTSIHVLEETADTAEVPIEDTTAAAEPLFT 317
++S E + D + ET+ A +D AAA+
Sbjct: 522 EMSAT--------IEEVAASADQV-------------AETSQRAAALGDDGQAAAQDAVA 560
Query: 318 DVMALEAQTQTNRTDVELIAARVASLQHHEIPISKNVQHD--LDLWARIREYDQRMAEEG 375
+ +E +TQ T V+ + A+++ ++ I+ + L L A I +G
Sbjct: 561 QLEEIEDETQAAATAVDDLEAKMSEIETIVAAITDIAEQTNMLALNANIEAARADQDGDG 620
Query: 376 FTQVLSK-KQQKDAKKAS 392
F V + K D KAS
Sbjct: 621 FAVVADEVKDLADESKAS 638
>DGRE_DROME (O44424) DGCR14 protein homolog (ES2 protein) (dES2)
Length = 501
Score = 33.5 bits (75), Expect = 1.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 190 SSKAFEAPVGNNNAESIPTTHKVATKLPVQTDLTESADAQHSDSA---NVSAAIHHSDDE 246
S FE PV + P + AT P TD +E +DA+ D+ ++ A + E
Sbjct: 120 SPATFETPVSQAKCSNTPLPNSRATDTPFSTDGSEKSDAEGRDTTAKLSLDAFLQKYTSE 179
Query: 247 DNLS 250
DN S
Sbjct: 180 DNQS 183
>RAF1_CHICK (P05625) RAF proto-oncogene serine/threonine-protein
kinase (EC 2.7.1.37) (RAF-1) (C-RAF) (MIL proto-oncogene
serine/threonine-protein kinase) (C-MIL)
Length = 647
Score = 33.1 bits (74), Expect = 2.0
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 31/185 (16%)
Query: 76 EIASAIGTPLLIDSATQNRVFGH-YARV----LVDMDL-SKHIFNEVMIERTGFSFSIEI 129
+ AS IG L +D + H +AR L D+ K + N + G+ F E
Sbjct: 117 DAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFH-EH 175
Query: 130 TYERLPAFCTHCGNIG------HHNSSCRWLHPVKEPLIDKKKKTIISQKPQPPKWLPRD 183
++P C NI + N S + P PL ++ + +S+ +P
Sbjct: 176 CSTKVPTMCVDWSNIRQLLLFPNSNISDSGV-PALPPLTMRRMRESVSR-------IPVS 227
Query: 184 NLDGIGSSKAFEAPVGNNNAE----------SIPTTHKVATKLPVQTDLTESADAQHSDS 233
+ + F N ++E S P H V+T +PV + + E A HS+S
Sbjct: 228 SQHRYSTPHVFTFNTSNPSSEGTLSQRQRSTSTPNVHMVSTTMPVDSRIIEDAIRNHSES 287
Query: 234 ANVSA 238
A+ SA
Sbjct: 288 ASPSA 292
>HSF1_HUMAN (Q00613) Heat shock factor protein 1 (HSF 1) (Heat shock
transcription factor 1) (HSTF 1)
Length = 529
Score = 32.7 bits (73), Expect = 2.6
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 177 PKWLPRDNLDGIGSSKAFEAPVGNNNAESIPTTHKVATKLPVQTDLTESADAQHSDSANV 236
PK+ + +L+ + S + AP ++ S+ VA+ P+ +D+TE A A S A+
Sbjct: 223 PKYSRQFSLEHVHGSGPYSAPSPAYSSSSLYAPDAVASSGPIISDITELAPA--SPMASP 280
Query: 237 SAAIHHSDDEDNLSAAAHHSDDVSPQNVTKDPLDFEFIPVMPDDINKATLPSTSIHVLEE 296
+I DE LS++ P + + P E P P ++ P+ I +
Sbjct: 281 GGSI----DERPLSSSPLVRVKEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILR 336
Query: 297 TADTAEVPIEDTTAA 311
++ A + T A
Sbjct: 337 ESEPAPASVTALTDA 351
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)
Length = 567
Score = 32.7 bits (73), Expect = 2.6
Identities = 21/120 (17%), Positives = 44/120 (36%)
Query: 195 EAPVGNNNAESIPTTHKVATKLPVQTDLTESADAQHSDSANVSAAIHHSDDEDNLSAAAH 254
+A G S TT T + + + S ++ S ++ S++I + S ++
Sbjct: 312 KASPGEETTSSSTTTTTTTTSTTISSSSSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSS 371
Query: 255 HSDDVSPQNVTKDPLDFEFIPVMPDDINKATLPSTSIHVLEETADTAEVPIEDTTAAAEP 314
+ + + + + +L S++I T+DT V +TT P
Sbjct: 372 STSSSTSSTTSSSTTSSQISTTSTAPTSSTSLSSSTISTSASTSDTTSVTSSETTPVVTP 431
>N100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore protein
NUP100/NSP100)
Length = 959
Score = 32.3 bits (72), Expect = 3.3
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 200 NNNAESIPTTHKVATKLPVQTDLTESADAQHSDSANVSAAIHHSDDEDNLSAAAHHSDDV 259
N N I A+K+ + T TESA S++++A+ L+ AH
Sbjct: 716 NKNLNVINHNDDEASKVKLVTFTTESASKDDQASSSIAAS--------KLTEKAH----- 762
Query: 260 SPQNVTKDPLDFEFIPVMPDDINKATLPSTSIHVLEETADTAEVP 304
SPQ KD D PD +K+ STSI ++E +++VP
Sbjct: 763 SPQTDLKDDHD----ESTPDPQSKSPNGSTSIPMIENEKISSKVP 803
>KLP1_SCHPO (Q92376) Kinesin-like protein 1
Length = 832
Score = 32.3 bits (72), Expect = 3.3
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 295 EETADTAEVPIEDTTAAAEPLFTDVMALEAQTQTNRTDVELIAARVASLQHHEIPISKNV 354
EE + + +ED A + L ++ E + + +E ++ VAS+Q E N
Sbjct: 379 EEKISSLRIELEDKLAEIDMLRNKLLKEEHKHHSTSEKLEELSKYVASIQDKE---RNNG 435
Query: 355 QHDLDLWARIREYDQRMAEEGFTQVLSKK 383
Q+ L+L ARI++ ++R E+ + ++L+++
Sbjct: 436 QNALELQARIQQLERR-NEDMYNKLLAEE 463
>ICAL_BOVIN (P20811) Calpain inhibitor (Calpastatin)
Length = 705
Score = 32.3 bits (72), Expect = 3.3
Identities = 34/151 (22%), Positives = 55/151 (35%), Gaps = 15/151 (9%)
Query: 130 TYERLPAFCTHCGNIGHHNSSCRWLHPVKEPLIDKKKKTIISQKPQPPKWLPRDNLDGIG 189
T E P T ++ H+S H KE + K + S+K PK +D + G G
Sbjct: 30 TQEVKPKEHTEPKSLPKHSSDTGVKHAPKEKAVSKSSEQPPSEKSTKPKTKSQDKISGGG 89
Query: 190 SSKAFEAPVGNNNAESIPTTHKVATKLPVQTDLTESADAQHSDSANVSAAIHHSDDEDNL 249
S P A + P KL ES ++ S +++ A+ D+L
Sbjct: 90 KS---TVPAAAAAASAEPADKNKENKLLTSAVPAESKPSKPSGKSDMDTAL------DDL 140
Query: 250 SAAAHHSDDVSPQNVT------KDPLDFEFI 274
+++ N T DP+ +I
Sbjct: 141 IDTLGEPEEMKEDNTTYTGPEVSDPMSSTYI 171
>HTR6_HALSA (Q48319) Halobacterial transducer protein VI
Length = 778
Score = 32.3 bits (72), Expect = 3.3
Identities = 43/181 (23%), Positives = 70/181 (37%), Gaps = 29/181 (16%)
Query: 220 TDLTESADAQHSDSANVSAAIHH-----SDDEDNLSAAAHHSDDVSPQNVTKDPLDFEFI 274
TD ++SA A +VS A+ +D D L A A +D++S E +
Sbjct: 479 TDASDSAAAVEQTGRDVSDAVGRIRDRAADQRDQLEAVASETDEMSAT--------IEEV 530
Query: 275 PVMPDDINKATLPSTSIHVLEETADTAEVPIEDTTAAAEPLFTDVMALEAQTQTNRTDVE 334
D + ET+ A +D AAA+ + +E +TQ T V+
Sbjct: 531 AASADQV-------------AETSQRAAALGDDGQAAAQDAVAQLEEIEDETQAAATAVD 577
Query: 335 LIAARVASLQHHEIPISKNVQHD--LDLWARIREYDQRMAEEGFTQVLSK-KQQKDAKKA 391
+ A+++ ++ I+ + L L A I +GF V + K D KA
Sbjct: 578 DLEAKMSEIETIVAAITDIAEQTNMLALNANIEAARADQDGDGFAVVADEVKDLADESKA 637
Query: 392 S 392
S
Sbjct: 638 S 638
>CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal
Nek2-associated protein 1) (C-NAP1) (Centrosome protein
250) (Centrosome associated protein CEP250)
Length = 2442
Score = 32.3 bits (72), Expect = 3.3
Identities = 23/87 (26%), Positives = 35/87 (39%), Gaps = 5/87 (5%)
Query: 294 LEETADTAEVPIEDTTAAAEPLFTDVMA----LEAQTQTNRTDVELIAARVASLQHHEIP 349
L+ D + ++D L T E + R VE++ L HE
Sbjct: 270 LKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELMEHEAS 329
Query: 350 ISKNVQHD-LDLWARIREYDQRMAEEG 375
+S+N Q + L L I++ Q M EEG
Sbjct: 330 LSRNAQEEKLSLQQVIKDITQVMVEEG 356
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,678,131
Number of Sequences: 164201
Number of extensions: 2850669
Number of successful extensions: 7602
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 7552
Number of HSP's gapped (non-prelim): 83
length of query: 559
length of database: 59,974,054
effective HSP length: 115
effective length of query: 444
effective length of database: 41,090,939
effective search space: 18244376916
effective search space used: 18244376916
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC135464.8